Click here to switch to the map view.

The map label for this gene is exbD2

Identifier: 110834829

GI number: 110834829

Start: 2247968

End: 2248348

Strand: Direct

Name: exbD2

Synonym: ABO_1968

Alternate gene names: NA

Gene position: 2247968-2248348 (Clockwise)

Preceding gene: 110834828

Following gene: 110834830

Centisome position: 72.05

GC content: 54.86

Gene sequence:

>381_bases
ATGCATATTGAACCTGAGCGTCATCGCACGCCCTTTATCAGCCTGACACCACTAATTGATGTGGTGTTTATCCTGCTGGT
GTTCTTCATGCTCGCCACCCGTTTCGGGCAATACCATGACCTGCCTGTTAACGTGCAACCCGCAGACAGCACCGAGCAAC
CGGACGAACAATGGTTAATCATCAACGTGCAGGCCAACGGTATGCTGACCCTTAATGATGTCAGCTTTACCCCGGCCGCG
GTTGCAGACCGGCTGGATACCAGCAAGACCAAGGTATGGGTCACAGTGAATCCAGAGGCCACTCTGCAACAGGCACTGAC
CGCTGTAGACGCCATGAAGGCCGCCGGCGTTCGCGATGTTCAACTGGAGCTGTTGCCATGA

Upstream 100 bases:

>100_bases
CGCGAGAAAATGCAGGATCGACTGTCGCGTTTGAAAGTATTGCGCAACAACCACACGGCTCCCGAGCCTCTGGAAGAGGA
ACGCGACCCGTCGGTGTCGC

Downstream 100 bases:

>100_bases
TGATCATGGAAACCTCATCACGCAGACCGCCACTGGAGCCGGTGCTGCCGCTGATCAATGTGGTCTTCCTGCTGTTGATC
TTCTTCATGTTAGCCGGACA

Product: ferric siderophore transport system inner membrane protein E

Products: NA

Alternate protein names: Ferric Siderophore Transport System Innermembrane Protein E

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MHIEPERHRTPFISLTPLIDVVFILLVFFMLATRFGQYHDLPVNVQPADSTEQPDEQWLIINVQANGMLTLNDVSFTPAA
VADRLDTSKTKVWVTVNPEATLQQALTAVDAMKAAGVRDVQLELLP

Sequences:

>Translated_126_residues
MHIEPERHRTPFISLTPLIDVVFILLVFFMLATRFGQYHDLPVNVQPADSTEQPDEQWLIINVQANGMLTLNDVSFTPAA
VADRLDTSKTKVWVTVNPEATLQQALTAVDAMKAAGVRDVQLELLP
>Mature_126_residues
MHIEPERHRTPFISLTPLIDVVFILLVFFMLATRFGQYHDLPVNVQPADSTEQPDEQWLIINVQANGMLTLNDVSFTPAA
VADRLDTSKTKVWVTVNPEATLQQALTAVDAMKAAGVRDVQLELLP

Specific function: Unknown

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14067; Mature: 14067

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIEPERHRTPFISLTPLIDVVFILLVFFMLATRFGQYHDLPVNVQPADSTEQPDEQWLI
CCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCEEE
INVQANGMLTLNDVSFTPAAVADRLDTSKTKVWVTVNPEATLQQALTAVDAMKAAGVRDV
EEEECCCEEEEECCCCCHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCEE
QLELLP
EEEECC
>Mature Secondary Structure
MHIEPERHRTPFISLTPLIDVVFILLVFFMLATRFGQYHDLPVNVQPADSTEQPDEQWLI
CCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCEEE
INVQANGMLTLNDVSFTPAAVADRLDTSKTKVWVTVNPEATLQQALTAVDAMKAAGVRDV
EEEECCCEEEEECCCCCHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCEE
QLELLP
EEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA