| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is blh [H]
Identifier: 110834805
GI number: 110834805
Start: 2222514
End: 2222942
Strand: Direct
Name: blh [H]
Synonym: ABO_1944
Alternate gene names: 110834805
Gene position: 2222514-2222942 (Clockwise)
Preceding gene: 110834804
Following gene: 110834806
Centisome position: 71.23
GC content: 58.74
Gene sequence:
>429_bases ATGACGACTACCAAGAAATTGACCGACACCCTCTTTGTCGCAGAACAGCTGCAGCCAGAAGATATGGCTGAGCTGGCCAA AGCGGGCTTCAAGATGGTCATCAACAACCGCCCCGATGGTGAAGATGAAAACCAACCCAGTAGCGCCGAAATGGCCGCCG CCGCCGAGGCAGCGGGCCTGGAATACGCTCACCAGCCTGTGGTGGGCAGTAACATCAGCGAAACCGATATCGACGGCTTC GACGCCATCGTCTCGCTGGCAGAAACACCAGTATTAGCGTTTTGCCGTACGGGAACCCGCAGCACAATGCTGTGGGCCCT GACCCAGGCCAGCGAACAAGACAACGCCCGCATTCTTGCCACCGCAGAACAAGCCGGTTACGACCTGAGCGGGCTGGTAG AGCGGCTCGATCAGCGCCGAGGCCAATAA
Upstream 100 bases:
>100_bases TGGCACCGGAATGTATAAAACAACAGGACCGCCAAGACGAAGAAGACTTGCAGCCCCCACATACCCCGGTAAGCTGACAG CAAATCATCAAGGAGTCTCC
Downstream 100 bases:
>100_bases CAACGTGCAGCGAGCCTTGCGAGTAATACGCTGGTTACCCGCCAGCGACTGGCTGGCTCGCTATACCCGCGCCGATGCCG CCGGTGACGGCTTGGCCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MTTTKKLTDTLFVAEQLQPEDMAELAKAGFKMVINNRPDGEDENQPSSAEMAAAAEAAGLEYAHQPVVGSNISETDIDGF DAIVSLAETPVLAFCRTGTRSTMLWALTQASEQDNARILATAEQAGYDLSGLVERLDQRRGQ
Sequences:
>Translated_142_residues MTTTKKLTDTLFVAEQLQPEDMAELAKAGFKMVINNRPDGEDENQPSSAEMAAAAEAAGLEYAHQPVVGSNISETDIDGF DAIVSLAETPVLAFCRTGTRSTMLWALTQASEQDNARILATAEQAGYDLSGLVERLDQRRGQ >Mature_141_residues TTTKKLTDTLFVAEQLQPEDMAELAKAGFKMVINNRPDGEDENQPSSAEMAAAAEAAGLEYAHQPVVGSNISETDIDGFD AIVSLAETPVLAFCRTGTRSTMLWALTQASEQDNARILATAEQAGYDLSGLVERLDQRRGQ
Specific function: Unknown
COG id: COG3453
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-B beta-lactamase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005939 - InterPro: IPR001279 [H]
Pfam domain/function: PF04273 DUF442; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 15307; Mature: 15176
Theoretical pI: Translated: 4.07; Mature: 4.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTKKLTDTLFVAEQLQPEDMAELAKAGFKMVINNRPDGEDENQPSSAEMAAAAEAAGL CCCCHHHHHHHHHHHHCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHCC EYAHQPVVGSNISETDIDGFDAIVSLAETPVLAFCRTGTRSTMLWALTQASEQDNARILA HHHCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHCCCCCCCEEEE TAEQAGYDLSGLVERLDQRRGQ EHHHHCCCHHHHHHHHHHHCCC >Mature Secondary Structure TTTKKLTDTLFVAEQLQPEDMAELAKAGFKMVINNRPDGEDENQPSSAEMAAAAEAAGL CCCHHHHHHHHHHHHCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHCC EYAHQPVVGSNISETDIDGFDAIVSLAETPVLAFCRTGTRSTMLWALTQASEQDNARILA HHHCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHCCCCCCCEEEE TAEQAGYDLSGLVERLDQRRGQ EHHHHCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]