| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110834793
Identifier: 110834793
GI number: 110834793
Start: 2208495
End: 2208947
Strand: Reverse
Name: 110834793
Synonym: ABO_1932
Alternate gene names: NA
Gene position: 2208947-2208495 (Counterclockwise)
Preceding gene: 110834794
Following gene: 110834792
Centisome position: 70.8
GC content: 54.75
Gene sequence:
>453_bases ATGTTGAATCACTTTTATAAAAAAACGTGCCAGGGGGCTGCCCTAGCAGCATTTCTGTGCTCTGGCATCGTCCATGCCGA TGTGAGTATTTCAGAGGGGTGGCTGAGGGCTGTGCCACCGGTATCGCCGACCATGGCCGGCTACCTAACCGTGACGAATA ACGGCGCGTTCAGCGTAAAAATCATTGGTGCCAGCAGTGAAGTCGCGGGTCACACCATGCTGCATAGCATGAAAACCCTG AAGGATGGCACTCGTAAAATGGGGCATTTGCACCACATCATGTTGGAACCGGGGGAATCTTTCTCGTTATCACCGGGCGG CGACCATTTGATGCTAATGAAACTTCGGCGAGTGCCCCAGCCTGGGGAATCGGTCACGGTTTGTCTGATGCCGGAGGAAG GGGATGAGATCTGCGCCAACCTGCCGGTGTTGCGTGAGGCTCCCGAGGTTTAA
Upstream 100 bases:
>100_bases TACCTGTTTACCCACAGCGACTACATATACCTGCTGGATGAACAGGCGCGTGTGCGCAAACTGTACCCGGCGGATTTCAA GATTGACGAGGTGGTAACGG
Downstream 100 bases:
>100_bases ACGAGCCTACACAAACTTGCGTTTGCGCCTCTTCTGCGCAATGGATAGCGCGCATACACTATAAATATGCGTCTGTTAAT CCTGATTATACTCATCGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MLNHFYKKTCQGAALAAFLCSGIVHADVSISEGWLRAVPPVSPTMAGYLTVTNNGAFSVKIIGASSEVAGHTMLHSMKTL KDGTRKMGHLHHIMLEPGESFSLSPGGDHLMLMKLRRVPQPGESVTVCLMPEEGDEICANLPVLREAPEV
Sequences:
>Translated_150_residues MLNHFYKKTCQGAALAAFLCSGIVHADVSISEGWLRAVPPVSPTMAGYLTVTNNGAFSVKIIGASSEVAGHTMLHSMKTL KDGTRKMGHLHHIMLEPGESFSLSPGGDHLMLMKLRRVPQPGESVTVCLMPEEGDEICANLPVLREAPEV >Mature_150_residues MLNHFYKKTCQGAALAAFLCSGIVHADVSISEGWLRAVPPVSPTMAGYLTVTNNGAFSVKIIGASSEVAGHTMLHSMKTL KDGTRKMGHLHHIMLEPGESFSLSPGGDHLMLMKLRRVPQPGESVTVCLMPEEGDEICANLPVLREAPEV
Specific function: Unknown
COG id: COG2847
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16108; Mature: 16108
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 8.7 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 6.0 %Met (Mature Protein) 8.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNHFYKKTCQGAALAAFLCSGIVHADVSISEGWLRAVPPVSPTMAGYLTVTNNGAFSVK CCCCHHHHHCCHHHHHHHHHHCHHCCCCCCCCCCEECCCCCCCCCEEEEEEECCCEEEEE IIGASSEVAGHTMLHSMKTLKDGTRKMGHLHHIMLEPGESFSLSPGGDHLMLMKLRRVPQ EECCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEECCCCCEEEEEEHHCCCC PGESVTVCLMPEEGDEICANLPVLREAPEV CCCCEEEEEECCCCCHHHHCCCCCCCCCCC >Mature Secondary Structure MLNHFYKKTCQGAALAAFLCSGIVHADVSISEGWLRAVPPVSPTMAGYLTVTNNGAFSVK CCCCHHHHHCCHHHHHHHHHHCHHCCCCCCCCCCEECCCCCCCCCEEEEEEECCCEEEEE IIGASSEVAGHTMLHSMKTLKDGTRKMGHLHHIMLEPGESFSLSPGGDHLMLMKLRRVPQ EECCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEECCCCCEEEEEEHHCCCC PGESVTVCLMPEEGDEICANLPVLREAPEV CCCCEEEEEECCCCCHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA