| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is tauC [H]
Identifier: 110834749
GI number: 110834749
Start: 2162279
End: 2163109
Strand: Direct
Name: tauC [H]
Synonym: ABO_1888
Alternate gene names: 110834749
Gene position: 2162279-2163109 (Clockwise)
Preceding gene: 110834748
Following gene: 110834750
Centisome position: 69.3
GC content: 56.2
Gene sequence:
>831_bases GTGGGAACCCCCATGAAGAAACTGATCAACAGACAGCCCAGCAGGGCAGCAAGCTGGGCATTGGGGCTACTTCCCTTTGC ACTGCTGATTGTCGTTTACATGTTGGCATCAGATGCACGTCTTGCCGACAATCCAAACGACAAACTCCTGCCTGCACTGG ACAGTTTTGTTCAGGCCATTAATCGCATGGCATTCGAGCCCAGCAAACGCAGCGGTGAGTACCTGCTTCTCGCCGATACC CTGGCCAGCCTGCAACGTTTGGCTATCGGTGTAGCCATCAGCGCCCTGGTCGCCATTATCGTGGGCATTGGCAACGGCAG CATCCCCCTGATCCGCTCCACATTTTCACCGCTGGTCACAGGGTTGTCGCTGGTTCCCCCCATGGCCATGCTGCCGGTGC TGTTCATCATTTTCGGGCTGGGCGAACTGGCCAAGGTGATGCTCATTATCATCGGTATCACGCCCTTCATGATTCGTGAC CTGCAACAGCGGGCGATGGAAATTCCTGCAGAACAAATCATCAAGCTGCAGACGTTAGGCGCCAATACTTGGCAGATCAT CACCCGGCTGGTGTGGCCGCAACTGATGCCACGGCTAATCAGCGCAGTGCGTTTGTCGCTAGGCCCCGCCTGGCTTTTCC TGATCGCCGCCGAAGCCATCGCTGCCACCGAAGGGCTGGGCTACCGGATCTTCTTGGTACGTCGCTACCTGTCCATGGAT GTGATTCTGCCCTACGTGGTGTGGATCACTCTGTTGGCCTTCGCAATAGACTTAATTCTCAGCCGCTATTCGCAATGGCG CCACCCTTGGTTCCACCAGAAAGGCCATTAA
Upstream 100 bases:
>100_bases GCCGCCGACGGGAAGCTGTAACACCTGAAGGCTCAGGTCGAGGCCGGACAGAGTTAGCTTTTTTCGGCGTCGACCATTGC ACTAGCTCCGACACTTACCA
Downstream 100 bases:
>100_bases GGAGCGTGCACCATGGCGATTATCGAAATGAAAAATCTGTGGAAAGAATACGGTGAACAAGTCGTGCTGGAACGGCTGAA CGCCACTGTGGAAGAAGGCG
Product: sulfonate ABC transporter permease
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MGTPMKKLINRQPSRAASWALGLLPFALLIVVYMLASDARLADNPNDKLLPALDSFVQAINRMAFEPSKRSGEYLLLADT LASLQRLAIGVAISALVAIIVGIGNGSIPLIRSTFSPLVTGLSLVPPMAMLPVLFIIFGLGELAKVMLIIIGITPFMIRD LQQRAMEIPAEQIIKLQTLGANTWQIITRLVWPQLMPRLISAVRLSLGPAWLFLIAAEAIAATEGLGYRIFLVRRYLSMD VILPYVVWITLLAFAIDLILSRYSQWRHPWFHQKGH
Sequences:
>Translated_276_residues MGTPMKKLINRQPSRAASWALGLLPFALLIVVYMLASDARLADNPNDKLLPALDSFVQAINRMAFEPSKRSGEYLLLADT LASLQRLAIGVAISALVAIIVGIGNGSIPLIRSTFSPLVTGLSLVPPMAMLPVLFIIFGLGELAKVMLIIIGITPFMIRD LQQRAMEIPAEQIIKLQTLGANTWQIITRLVWPQLMPRLISAVRLSLGPAWLFLIAAEAIAATEGLGYRIFLVRRYLSMD VILPYVVWITLLAFAIDLILSRYSQWRHPWFHQKGH >Mature_275_residues GTPMKKLINRQPSRAASWALGLLPFALLIVVYMLASDARLADNPNDKLLPALDSFVQAINRMAFEPSKRSGEYLLLADTL ASLQRLAIGVAISALVAIIVGIGNGSIPLIRSTFSPLVTGLSLVPPMAMLPVLFIIFGLGELAKVMLIIIGITPFMIRDL QQRAMEIPAEQIIKLQTLGANTWQIITRLVWPQLMPRLISAVRLSLGPAWLFLIAAEAIAATEGLGYRIFLVRRYLSMDV ILPYVVWITLLAFAIDLILSRYSQWRHPWFHQKGH
Specific function: Part of a binding-protein-dependent transport system for taurine. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786564, Length=192, Percent_Identity=32.2916666666667, Blast_Score=93, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 30603; Mature: 30472
Theoretical pI: Translated: 10.68; Mature: 10.68
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTPMKKLINRQPSRAASWALGLLPFALLIVVYMLASDARLADNPNDKLLPALDSFVQAI CCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH NRMAFEPSKRSGEYLLLADTLASLQRLAIGVAISALVAIIVGIGNGSIPLIRSTFSPLVT HHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH GLSLVPPMAMLPVLFIIFGLGELAKVMLIIIGITPFMIRDLQQRAMEIPAEQIIKLQTLG HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC ANTWQIITRLVWPQLMPRLISAVRLSLGPAWLFLIAAEAIAATEGLGYRIFLVRRYLSMD CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH VILPYVVWITLLAFAIDLILSRYSQWRHPWFHQKGH HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure GTPMKKLINRQPSRAASWALGLLPFALLIVVYMLASDARLADNPNDKLLPALDSFVQAI CCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH NRMAFEPSKRSGEYLLLADTLASLQRLAIGVAISALVAIIVGIGNGSIPLIRSTFSPLVT HHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH GLSLVPPMAMLPVLFIIFGLGELAKVMLIIIGITPFMIRDLQQRAMEIPAEQIIKLQTLG HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC ANTWQIITRLVWPQLMPRLISAVRLSLGPAWLFLIAAEAIAATEGLGYRIFLVRRYLSMD CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH VILPYVVWITLLAFAIDLILSRYSQWRHPWFHQKGH HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8808933; 9278503 [H]