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The map label for this gene is usf [H]

Identifier: 110834747

GI number: 110834747

Start: 2159926

End: 2160702

Strand: Direct

Name: usf [H]

Synonym: ABO_1886

Alternate gene names: 110834747

Gene position: 2159926-2160702 (Clockwise)

Preceding gene: 110834746

Following gene: 110834748

Centisome position: 69.23

GC content: 57.53

Gene sequence:

>777_bases
ATGAAACGGCTCATCTTACTCGCATCCCTTATCTTTGCCGGCCAAACCGGCTACACCGACATCATTGAAACCGAAGTTAC
CCTGCCTGACGGCCTAGGTAAGGGCGTCATGTACCTCAATGATCGCCAGAAAGACCCGGGCCCCGGAGTCATTGTAGTGC
ACGAATGGTGGGGCTTGGATGACTATGCCCGTAACCGCGCGCACATGTTGGCGGAAGCGGGTTACACCGCTTTTGCGGTA
GATATGTACGGCACCGGCAAAGTTGCCAGCCATCCGAAAGATGCGAAAAGTTTTATGGAAACCGCATTATCAAACCCGGA
AACCATGAATGCCCGCTTTCAGGCTGCTCGCACCCTGATGCTCAAACAGCAGCAAGTTGAGCCAGGGCGCCTGTTTGCCA
TCGGCTACTGTTTTGGTGGCGCAGTGGTGCTGGAACAGGCCCGCCGGGGTACTGATTTGGCCGGCGTAGCCAGCTTCCAT
GGCAGCCTGGGCACCGAGAACCCGGCAAAATCCGGCGAGCTGAAAGCACGGGTTCTAGTCGCTACAGGGCAGGCTGACCC
CATGGTGCCCGCAAAACAAGTAAGTGGTTTTGTCAGCGAGATGACCGCTGCCGGAGCCGATTTCCAATTACTGAGTTTCC
CGGAGGCCAAGCACGGCTTCACTAACCCCGGGGCCGATGCTGCCGGTGAGCGATTCGAAATGCCCCTGGCCTACAGCGCT
CATGCGGATCAGGTGAGCTGGGAGGCACTGATCGACTTCCTGGAACAGCCGGAGTAA

Upstream 100 bases:

>100_bases
CCCAGCCACGACGTAAACTCATTTACGACGACTTCGGCGAACCACTTCGTTGGGTCTGGCAAAATAAATAATTTCGCTGA
AACTTAGCAAGGACAGGTCT

Downstream 100 bases:

>100_bases
CCCGCACCACCCGAGCGCAAAGACGCGCGCCATGCACCATGCCGGCACACTTCATCGCGCCGGCATGGTATCCCCAATTC
TGCTCCCCTCCCCCTAATTT

Product: dienelactone hydrolase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MKRLILLASLIFAGQTGYTDIIETEVTLPDGLGKGVMYLNDRQKDPGPGVIVVHEWWGLDDYARNRAHMLAEAGYTAFAV
DMYGTGKVASHPKDAKSFMETALSNPETMNARFQAARTLMLKQQQVEPGRLFAIGYCFGGAVVLEQARRGTDLAGVASFH
GSLGTENPAKSGELKARVLVATGQADPMVPAKQVSGFVSEMTAAGADFQLLSFPEAKHGFTNPGADAAGERFEMPLAYSA
HADQVSWEALIDFLEQPE

Sequences:

>Translated_258_residues
MKRLILLASLIFAGQTGYTDIIETEVTLPDGLGKGVMYLNDRQKDPGPGVIVVHEWWGLDDYARNRAHMLAEAGYTAFAV
DMYGTGKVASHPKDAKSFMETALSNPETMNARFQAARTLMLKQQQVEPGRLFAIGYCFGGAVVLEQARRGTDLAGVASFH
GSLGTENPAKSGELKARVLVATGQADPMVPAKQVSGFVSEMTAAGADFQLLSFPEAKHGFTNPGADAAGERFEMPLAYSA
HADQVSWEALIDFLEQPE
>Mature_258_residues
MKRLILLASLIFAGQTGYTDIIETEVTLPDGLGKGVMYLNDRQKDPGPGVIVVHEWWGLDDYARNRAHMLAEAGYTAFAV
DMYGTGKVASHPKDAKSFMETALSNPETMNARFQAARTLMLKQQQVEPGRLFAIGYCFGGAVVLEQARRGTDLAGVASFH
GSLGTENPAKSGELKARVLVATGQADPMVPAKQVSGFVSEMTAAGADFQLLSFPEAKHGFTNPGADAAGERFEMPLAYSA
HADQVSWEALIDFLEQPE

Specific function: Unknown

COG id: COG0412

COG function: function code Q; Dienelactone hydrolase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI17532655, Length=227, Percent_Identity=33.0396475770925, Blast_Score=117, Evalue=8e-27,
Organism=Caenorhabditis elegans, GI17536419, Length=211, Percent_Identity=32.2274881516588, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI193204305, Length=211, Percent_Identity=30.8056872037915, Blast_Score=93, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17532653, Length=216, Percent_Identity=31.4814814814815, Blast_Score=91, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI17536415, Length=210, Percent_Identity=27.1428571428571, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17534829, Length=156, Percent_Identity=32.0512820512821, Blast_Score=67, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002925 [H]

Pfam domain/function: PF01738 DLH [H]

EC number: NA

Molecular weight: Translated: 27801; Mature: 27801

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLILLASLIFAGQTGYTDIIETEVTLPDGLGKGVMYLNDRQKDPGPGVIVVHEWWGLD
CCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCEEEEECCCCCC
DYARNRAHMLAEAGYTAFAVDMYGTGKVASHPKDAKSFMETALSNPETMNARFQAARTLM
HHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LKQQQVEPGRLFAIGYCFGGAVVLEQARRGTDLAGVASFHGSLGTENPAKSGELKARVLV
HHHHCCCCCEEEEEEEHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEE
ATGQADPMVPAKQVSGFVSEMTAAGADFQLLSFPEAKHGFTNPGADAAGERFEMPLAYSA
EECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHCCCCCCCCCCCCCCCCCCEEECC
HADQVSWEALIDFLEQPE
CCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MKRLILLASLIFAGQTGYTDIIETEVTLPDGLGKGVMYLNDRQKDPGPGVIVVHEWWGLD
CCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCEEEEECCCCCC
DYARNRAHMLAEAGYTAFAVDMYGTGKVASHPKDAKSFMETALSNPETMNARFQAARTLM
HHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LKQQQVEPGRLFAIGYCFGGAVVLEQARRGTDLAGVASFHGSLGTENPAKSGELKARVLV
HHHHCCCCCEEEEEEEHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEE
ATGQADPMVPAKQVSGFVSEMTAAGADFQLLSFPEAKHGFTNPGADAAGERFEMPLAYSA
EECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHCCCCCCCCCCCCCCCCCCEEECC
HADQVSWEALIDFLEQPE
CCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7592443 [H]