| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110834745
Identifier: 110834745
GI number: 110834745
Start: 2158476
End: 2158871
Strand: Direct
Name: 110834745
Synonym: ABO_1884
Alternate gene names: NA
Gene position: 2158476-2158871 (Clockwise)
Preceding gene: 110834736
Following gene: 110834746
Centisome position: 69.18
GC content: 48.74
Gene sequence:
>396_bases ATGGTTACCTATCTCTATTGGTTCCTGGTAGCAGCACTAGTCATTGGTGCACTATTTGGTGTTGGCGTACGGTTAGGCAA ATGGAAGCCTGCCGTGATTATCGCTGTGATTATCTGGCTCACCGCTACCATCGCCTATTATTTCTGGTTACAGCAGGTGT TTGTGAAGCGCTTTGGCGGCACCATGCATATTTCCGTGCCAGAAGAGCAGTACCATCTAAATGCCACGTGGAAAGATGAC AACCTGTGGATTGAAAACTACGACCCGGAAACCAACCAATGCATTTTCCGCGAATATTCCCGCGGCAATATGCTAGAAGG TAAGGTGGTCATTAAGAACTGTAACCCGCTGCAAAGCACCGGTATGGTTCTGCCCAAAGATTCCGCCGCCCAGTAA
Upstream 100 bases:
>100_bases ATGGTTTTACACCCACCCCTGCGTTGACTGCTATGATGCCAGAGACACTTCGCGCACTTAAGCGCCATTACAACAAACCT CAAACGACAAGGATGCAAGT
Downstream 100 bases:
>100_bases TACCCCCAACTCTCTAACAGCCTGATTGTCAGCTCTGCATGGGCTGCCTTCAGGCCCTGTTTCAACCTGGCATAGGAAGA ACGATGGCCTCTTCGCTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MVTYLYWFLVAALVIGALFGVGVRLGKWKPAVIIAVIIWLTATIAYYFWLQQVFVKRFGGTMHISVPEEQYHLNATWKDD NLWIENYDPETNQCIFREYSRGNMLEGKVVIKNCNPLQSTGMVLPKDSAAQ
Sequences:
>Translated_131_residues MVTYLYWFLVAALVIGALFGVGVRLGKWKPAVIIAVIIWLTATIAYYFWLQQVFVKRFGGTMHISVPEEQYHLNATWKDD NLWIENYDPETNQCIFREYSRGNMLEGKVVIKNCNPLQSTGMVLPKDSAAQ >Mature_131_residues MVTYLYWFLVAALVIGALFGVGVRLGKWKPAVIIAVIIWLTATIAYYFWLQQVFVKRFGGTMHISVPEEQYHLNATWKDD NLWIENYDPETNQCIFREYSRGNMLEGKVVIKNCNPLQSTGMVLPKDSAAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15035; Mature: 15035
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTYLYWFLVAALVIGALFGVGVRLGKWKPAVIIAVIIWLTATIAYYFWLQQVFVKRFGG CHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TMHISVPEEQYHLNATWKDDNLWIENYDPETNQCIFREYSRGNMLEGKVVIKNCNPLQST EEEEECCCHHEEEEEEECCCCEEEECCCCCCCHHHHHHCCCCCEECCEEEEECCCCCCCC GMVLPKDSAAQ CEECCCCCCCC >Mature Secondary Structure MVTYLYWFLVAALVIGALFGVGVRLGKWKPAVIIAVIIWLTATIAYYFWLQQVFVKRFGG CHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TMHISVPEEQYHLNATWKDDNLWIENYDPETNQCIFREYSRGNMLEGKVVIKNCNPLQST EEEEECCCHHEEEEEEECCCCEEEECCCCCCCHHHHHHCCCCCEECCEEEEECCCCCCCC GMVLPKDSAAQ CEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA