Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110834632

Identifier: 110834632

GI number: 110834632

Start: 2017732

End: 2018724

Strand: Direct

Name: 110834632

Synonym: ABO_1771

Alternate gene names: NA

Gene position: 2017732-2018724 (Clockwise)

Preceding gene: 110834631

Following gene: 110834637

Centisome position: 64.67

GC content: 50.76

Gene sequence:

>993_bases
ATGAAGAAGCTGTTTACCGCCATTCTAGCCCTTTATGCCCTGTCTGCGCCTTTTAGCGCACAGGCAAACACCATCAAACG
CAAAATCTGTGTATTTGATATTGTCGGCAATGTAGGCCCGATCATGAACGCCATGAGAGACTGGAAAGCCGCCGCGCGAG
GCTGGGGCCTGGAAACAGAGCTTGTGCCCTATACCAACGAGGCCATTGTTGCTGAGGACCTGAAAGCCGGTATTTGCGAT
GCCTCTTTGATTACTGGCATTCGCGGTCGGGCATTCAATAAATATGCAGGGACAGTGGATTCCATTGGGGCCATTCCCAC
CATGGACCATATGAAAGTGCTGCTACAAGTACTTTCCCACCCCCAAAGCGCGGACAAACTATCCCAAGGGTCCTACCAAA
TTATGGGAATTGCGCCCGCTGGGGCCGCATTTGTTTTCGTGAATGACCGAGAAGTAAATTCTCTGGCTAAGGCTGCTGGC
AAAAAGGTCGCGGTTCTAGAATACGATGAAACCCAAGCCAAACTCGTTTCCCAGGTCGGCGCTACACCCATCGCCTCAGA
CATCACCAACTTCTCCACCAAGTTCAACAATGGCGTTGTTGATATCATTGTTGCACCGCTGGTGGCCTACAGCGCTCTGG
AATTGTACAAGGGCTTGAGCCCAGACGGTGGAATCATCAATTACCCACTGGTTCAGCTAACCTTCCAGTTAATTGCGAAG
AAAGACCGGTTCCCAGCAGAAATGGCTCAAAAATCACGGGAATACTTCTATAATAACCTGCAACGGATTACCAGCCAGTT
AGATAATGAGGCCAAGCATGTGGCCAAGCATTGGTGGGTAGAAATCCCCGATGCGGACAAAGCCGAATATGAAGTCATGA
TGCAGGAAGCCCGTGATCAACTTCGCGACGAAGGTTACTACGATCAGGACATGCTCACTCTTCTGCGCAAGGTTCGCTGC
AAAATGGAAGCGACCCGTGCAGAGTGCAGCTGA

Upstream 100 bases:

>100_bases
AGCAAAAAATCAAAGGCATTGCGTTGGCGGTTGACATCTCTACTATCGAGAAAATCAACCATCGGCAAACATACTAGTAA
TAACAAGCAGGGATACACTG

Downstream 100 bases:

>100_bases
CAGTTAAAAATTGAAGCTTTTTTCGCTCTAAAGCAAAGAGGCCGCGTCCATAAAAATTAGACGCGGCCTCTTACGTTTAG
CGCTTTTCTAAGCTGCAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: RND Type Efflux Pump Involved In Aminoglycoside Resistance

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MKKLFTAILALYALSAPFSAQANTIKRKICVFDIVGNVGPIMNAMRDWKAAARGWGLETELVPYTNEAIVAEDLKAGICD
ASLITGIRGRAFNKYAGTVDSIGAIPTMDHMKVLLQVLSHPQSADKLSQGSYQIMGIAPAGAAFVFVNDREVNSLAKAAG
KKVAVLEYDETQAKLVSQVGATPIASDITNFSTKFNNGVVDIIVAPLVAYSALELYKGLSPDGGIINYPLVQLTFQLIAK
KDRFPAEMAQKSREYFYNNLQRITSQLDNEAKHVAKHWWVEIPDADKAEYEVMMQEARDQLRDEGYYDQDMLTLLRKVRC
KMEATRAECS

Sequences:

>Translated_330_residues
MKKLFTAILALYALSAPFSAQANTIKRKICVFDIVGNVGPIMNAMRDWKAAARGWGLETELVPYTNEAIVAEDLKAGICD
ASLITGIRGRAFNKYAGTVDSIGAIPTMDHMKVLLQVLSHPQSADKLSQGSYQIMGIAPAGAAFVFVNDREVNSLAKAAG
KKVAVLEYDETQAKLVSQVGATPIASDITNFSTKFNNGVVDIIVAPLVAYSALELYKGLSPDGGIINYPLVQLTFQLIAK
KDRFPAEMAQKSREYFYNNLQRITSQLDNEAKHVAKHWWVEIPDADKAEYEVMMQEARDQLRDEGYYDQDMLTLLRKVRC
KMEATRAECS
>Mature_330_residues
MKKLFTAILALYALSAPFSAQANTIKRKICVFDIVGNVGPIMNAMRDWKAAARGWGLETELVPYTNEAIVAEDLKAGICD
ASLITGIRGRAFNKYAGTVDSIGAIPTMDHMKVLLQVLSHPQSADKLSQGSYQIMGIAPAGAAFVFVNDREVNSLAKAAG
KKVAVLEYDETQAKLVSQVGATPIASDITNFSTKFNNGVVDIIVAPLVAYSALELYKGLSPDGGIINYPLVQLTFQLIAK
KDRFPAEMAQKSREYFYNNLQRITSQLDNEAKHVAKHWWVEIPDADKAEYEVMMQEARDQLRDEGYYDQDMLTLLRKVRC
KMEATRAECS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36456; Mature: 36456

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLFTAILALYALSAPFSAQANTIKRKICVFDIVGNVGPIMNAMRDWKAAARGWGLETE
CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCE
LVPYTNEAIVAEDLKAGICDASLITGIRGRAFNKYAGTVDSIGAIPTMDHMKVLLQVLSH
ECCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCHHHCCCHHHCCCCCCHHHHHHHHHHHHC
PQSADKLSQGSYQIMGIAPAGAAFVFVNDREVNSLAKAAGKKVAVLEYDETQAKLVSQVG
CCCHHHHCCCCEEEEEECCCCEEEEEEECHHHHHHHHHCCCEEEEEECCHHHHHHHHHHC
ATPIASDITNFSTKFNNGVVDIIVAPLVAYSALELYKGLSPDGGIINYPLVQLTFQLIAK
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHH
KDRFPAEMAQKSREYFYNNLQRITSQLDNEAKHVAKHWWVEIPDADKAEYEVMMQEARDQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHH
LRDEGYYDQDMLTLLRKVRCKMEATRAECS
HHHCCCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKLFTAILALYALSAPFSAQANTIKRKICVFDIVGNVGPIMNAMRDWKAAARGWGLETE
CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCE
LVPYTNEAIVAEDLKAGICDASLITGIRGRAFNKYAGTVDSIGAIPTMDHMKVLLQVLSH
ECCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCHHHCCCHHHCCCCCCHHHHHHHHHHHHC
PQSADKLSQGSYQIMGIAPAGAAFVFVNDREVNSLAKAAGKKVAVLEYDETQAKLVSQVG
CCCHHHHCCCCEEEEEECCCCEEEEEEECHHHHHHHHHCCCEEEEEECCHHHHHHHHHHC
ATPIASDITNFSTKFNNGVVDIIVAPLVAYSALELYKGLSPDGGIINYPLVQLTFQLIAK
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHH
KDRFPAEMAQKSREYFYNNLQRITSQLDNEAKHVAKHWWVEIPDADKAEYEVMMQEARDQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHH
LRDEGYYDQDMLTLLRKVRCKMEATRAECS
HHHCCCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA