Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110834599

Identifier: 110834599

GI number: 110834599

Start: 1981951

End: 1983231

Strand: Direct

Name: 110834599

Synonym: ABO_1738

Alternate gene names: NA

Gene position: 1981951-1983231 (Clockwise)

Preceding gene: 110834598

Following gene: 110834600

Centisome position: 63.52

GC content: 55.11

Gene sequence:

>1281_bases
GTGGAAGATGAAGAGAGAGCACTAGAACGACAGCAAGAAACCGATGCGGACGCGCCGAATAAACCCCCTCATCGAATAGA
GAGCTCAAACACCGATCACTCGGATACCAACGAGGCAACAGGCGAAGCTGAACCTGCGGGGCCAGACCCGCTACCTCTGC
TTGGCCAGAGAGTACAGCCCGGTACCTTCGCAACCCTACACTGGACGCCGGATCAGTCGTTCGCCTCCATTGCCACTCCA
GTCCCAGTACTCGTCGCCCATGGCTTAAAACCTGGTCCAAAGCTGTGCCTCACCGCCGCTATTCACGGTGACGAATTAAA
CGGCATAGAAATGGTTCGGCGGCTCATGTACGAACTGGAGCCTAACGAACTGGCCGGTACTGTGATCGGCGTTCCCATTG
TTAACCTAGACGGTTTTCGCAGCGGCAGCCGCTACCTAAGCGACCGCCGCGACCTCAACCGCTACTTCCCCGGCAATAAG
GATGGCAGCGCAGCCAGCCGTGTCGCCCACTCGTTGTTTGGAAATATCGTCAGCCACTGCGATTACTTGGTAGACCTGCA
TACAGGCTCCCAGAAGCGGATTAACCAACCCCAACTACGTGCCGATTTAGACAATCAGGACGTAGTTGCTTTCGCGAAAC
ACTTTGGCGGCATGACCGTACTGCACAGCCCCGGGGTGACCGGCATGCTCCGTGATGCGGCGGTAAAAGAAGGTATTGTC
GCTGTAACCATGGAAGCCGGCGGCCCAAACCGGTTAGAAACCCAGGCGGTAAGCTATGGTGTGCAGGCCATAGAAACCCT
GCTGGAAAACCTGGAAATGCGCAAAGCCAGCCGTTTTTGGAGCGCACCACAACCGGTATTTTTCGAATCAGAATGGATCC
GCGCAAGCCAAGGTGGAATTCTGTTGTCTGAGGTGGAACTGAACGACAAAGTGAAAAAAGGGCAGATACTGGGCACCGTA
ACCGACCCGATCAGCAATACTGGCAGTGCCATTATCGCCCCCTATAACGGGCGAGTGCTGGGCATGGCGGTGAACCAAGT
GGTTCACGCCGGGTTCGCCGCGTTTAGAATCGGTGAAGTGAAGAGCACCGAGGAAGTCGAAGCCCAGGCTGAAAAAGCCA
GCAAGAAAAAAGAACAAAAGGAAAACAACGGAGATAAATCAGAACTTGAAAGTGAACTTGTGCCACCCAAGGCGCCACAG
CCTGAGCGTGACGTGGATCGTGCTGAAGATATCAGCTCCCTCGATCATCAAAACGATGGGGGCAACGAACCGCACCCCTG
A

Upstream 100 bases:

>100_bases
CAATATGCAAGGAGCCATTGTGCACAAACCTCTGTCATGGATAACGCTGGGCACCCTGTCATTACTCGCCACTCTGGCCC
AACCCGTTTGGGCCACCGAG

Downstream 100 bases:

>100_bases
TGAACCTGCTCAGCCGCAGCCTGGAACCTAGCCCCTGGCTGCGGCAACTCGGCCCGGTTGTTTGCTCCAAGTGTTATTTC
ACCACAATTTGATCGCGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: Deacylase; Ectoine Utilization Protein EutE; Succinylglutamate Desuccinylase / Aspartoacylase Family; Succinate Dehydrogenase Subunit Sdh; Succinate Dehydrogenase Subunit; Succinylglutamatedesuccinylase/Aspartoacylase; Deacylase-Like; Succinylglutamate Desuccinylase; Serine Protease; Aminoacylase-2/Carboxypeptidase-Z Family Hydrolase; AstE/AspA Family Protein; N-Acetyl Diamonbutyric Acid Acylase

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MEDEERALERQQETDADAPNKPPHRIESSNTDHSDTNEATGEAEPAGPDPLPLLGQRVQPGTFATLHWTPDQSFASIATP
VPVLVAHGLKPGPKLCLTAAIHGDELNGIEMVRRLMYELEPNELAGTVIGVPIVNLDGFRSGSRYLSDRRDLNRYFPGNK
DGSAASRVAHSLFGNIVSHCDYLVDLHTGSQKRINQPQLRADLDNQDVVAFAKHFGGMTVLHSPGVTGMLRDAAVKEGIV
AVTMEAGGPNRLETQAVSYGVQAIETLLENLEMRKASRFWSAPQPVFFESEWIRASQGGILLSEVELNDKVKKGQILGTV
TDPISNTGSAIIAPYNGRVLGMAVNQVVHAGFAAFRIGEVKSTEEVEAQAEKASKKKEQKENNGDKSELESELVPPKAPQ
PERDVDRAEDISSLDHQNDGGNEPHP

Sequences:

>Translated_426_residues
MEDEERALERQQETDADAPNKPPHRIESSNTDHSDTNEATGEAEPAGPDPLPLLGQRVQPGTFATLHWTPDQSFASIATP
VPVLVAHGLKPGPKLCLTAAIHGDELNGIEMVRRLMYELEPNELAGTVIGVPIVNLDGFRSGSRYLSDRRDLNRYFPGNK
DGSAASRVAHSLFGNIVSHCDYLVDLHTGSQKRINQPQLRADLDNQDVVAFAKHFGGMTVLHSPGVTGMLRDAAVKEGIV
AVTMEAGGPNRLETQAVSYGVQAIETLLENLEMRKASRFWSAPQPVFFESEWIRASQGGILLSEVELNDKVKKGQILGTV
TDPISNTGSAIIAPYNGRVLGMAVNQVVHAGFAAFRIGEVKSTEEVEAQAEKASKKKEQKENNGDKSELESELVPPKAPQ
PERDVDRAEDISSLDHQNDGGNEPHP
>Mature_426_residues
MEDEERALERQQETDADAPNKPPHRIESSNTDHSDTNEATGEAEPAGPDPLPLLGQRVQPGTFATLHWTPDQSFASIATP
VPVLVAHGLKPGPKLCLTAAIHGDELNGIEMVRRLMYELEPNELAGTVIGVPIVNLDGFRSGSRYLSDRRDLNRYFPGNK
DGSAASRVAHSLFGNIVSHCDYLVDLHTGSQKRINQPQLRADLDNQDVVAFAKHFGGMTVLHSPGVTGMLRDAAVKEGIV
AVTMEAGGPNRLETQAVSYGVQAIETLLENLEMRKASRFWSAPQPVFFESEWIRASQGGILLSEVELNDKVKKGQILGTV
TDPISNTGSAIIAPYNGRVLGMAVNQVVHAGFAAFRIGEVKSTEEVEAQAEKASKKKEQKENNGDKSELESELVPPKAPQ
PERDVDRAEDISSLDHQNDGGNEPHP

Specific function: Unknown

COG id: COG3608

COG function: function code R; Predicted deacylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46261; Mature: 46261

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDEERALERQQETDADAPNKPPHRIESSNTDHSDTNEATGEAEPAGPDPLPLLGQRVQP
CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCC
GTFATLHWTPDQSFASIATPVPVLVAHGLKPGPKLCLTAAIHGDELNGIEMVRRLMYELE
CEEEEEEECCCCCHHHHCCCHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCC
PNELAGTVIGVPIVNLDGFRSGSRYLSDRRDLNRYFPGNKDGSAASRVAHSLFGNIVSHC
CCHHCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
DYLVDLHTGSQKRINQPQLRADLDNQDVVAFAKHFGGMTVLHSPGVTGMLRDAAVKEGIV
HEEEEECCCCHHCCCCCHHHCCCCCCHHHHHHHHHCCEEEEECCCCCHHHHHHHHHCCEE
AVTMEAGGPNRLETQAVSYGVQAIETLLENLEMRKASRFWSAPQPVFFESEWIRASQGGI
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHEECCCCE
LLSEVELNDKVKKGQILGTVTDPISNTGSAIIAPYNGRVLGMAVNQVVHAGFAAFRIGEV
EEEEECCCCCHHCCEEEEEECCCCCCCCCEEEECCCCEEEHHHHHHHHHHHHHHEEECCC
KSTEEVEAQAEKASKKKEQKENNGDKSELESELVPPKAPQPERDVDRAEDISSLDHQNDG
CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCC
GNEPHP
CCCCCC
>Mature Secondary Structure
MEDEERALERQQETDADAPNKPPHRIESSNTDHSDTNEATGEAEPAGPDPLPLLGQRVQP
CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCC
GTFATLHWTPDQSFASIATPVPVLVAHGLKPGPKLCLTAAIHGDELNGIEMVRRLMYELE
CEEEEEEECCCCCHHHHCCCHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCC
PNELAGTVIGVPIVNLDGFRSGSRYLSDRRDLNRYFPGNKDGSAASRVAHSLFGNIVSHC
CCHHCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
DYLVDLHTGSQKRINQPQLRADLDNQDVVAFAKHFGGMTVLHSPGVTGMLRDAAVKEGIV
HEEEEECCCCHHCCCCCHHHCCCCCCHHHHHHHHHCCEEEEECCCCCHHHHHHHHHCCEE
AVTMEAGGPNRLETQAVSYGVQAIETLLENLEMRKASRFWSAPQPVFFESEWIRASQGGI
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHEECCCCE
LLSEVELNDKVKKGQILGTVTDPISNTGSAIIAPYNGRVLGMAVNQVVHAGFAAFRIGEV
EEEEECCCCCHHCCEEEEEECCCCCCCCCEEEECCCCEEEHHHHHHHHHHHHHHEEECCC
KSTEEVEAQAEKASKKKEQKENNGDKSELESELVPPKAPQPERDVDRAEDISSLDHQNDG
CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCC
GNEPHP
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA