| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110834599
Identifier: 110834599
GI number: 110834599
Start: 1981951
End: 1983231
Strand: Direct
Name: 110834599
Synonym: ABO_1738
Alternate gene names: NA
Gene position: 1981951-1983231 (Clockwise)
Preceding gene: 110834598
Following gene: 110834600
Centisome position: 63.52
GC content: 55.11
Gene sequence:
>1281_bases GTGGAAGATGAAGAGAGAGCACTAGAACGACAGCAAGAAACCGATGCGGACGCGCCGAATAAACCCCCTCATCGAATAGA GAGCTCAAACACCGATCACTCGGATACCAACGAGGCAACAGGCGAAGCTGAACCTGCGGGGCCAGACCCGCTACCTCTGC TTGGCCAGAGAGTACAGCCCGGTACCTTCGCAACCCTACACTGGACGCCGGATCAGTCGTTCGCCTCCATTGCCACTCCA GTCCCAGTACTCGTCGCCCATGGCTTAAAACCTGGTCCAAAGCTGTGCCTCACCGCCGCTATTCACGGTGACGAATTAAA CGGCATAGAAATGGTTCGGCGGCTCATGTACGAACTGGAGCCTAACGAACTGGCCGGTACTGTGATCGGCGTTCCCATTG TTAACCTAGACGGTTTTCGCAGCGGCAGCCGCTACCTAAGCGACCGCCGCGACCTCAACCGCTACTTCCCCGGCAATAAG GATGGCAGCGCAGCCAGCCGTGTCGCCCACTCGTTGTTTGGAAATATCGTCAGCCACTGCGATTACTTGGTAGACCTGCA TACAGGCTCCCAGAAGCGGATTAACCAACCCCAACTACGTGCCGATTTAGACAATCAGGACGTAGTTGCTTTCGCGAAAC ACTTTGGCGGCATGACCGTACTGCACAGCCCCGGGGTGACCGGCATGCTCCGTGATGCGGCGGTAAAAGAAGGTATTGTC GCTGTAACCATGGAAGCCGGCGGCCCAAACCGGTTAGAAACCCAGGCGGTAAGCTATGGTGTGCAGGCCATAGAAACCCT GCTGGAAAACCTGGAAATGCGCAAAGCCAGCCGTTTTTGGAGCGCACCACAACCGGTATTTTTCGAATCAGAATGGATCC GCGCAAGCCAAGGTGGAATTCTGTTGTCTGAGGTGGAACTGAACGACAAAGTGAAAAAAGGGCAGATACTGGGCACCGTA ACCGACCCGATCAGCAATACTGGCAGTGCCATTATCGCCCCCTATAACGGGCGAGTGCTGGGCATGGCGGTGAACCAAGT GGTTCACGCCGGGTTCGCCGCGTTTAGAATCGGTGAAGTGAAGAGCACCGAGGAAGTCGAAGCCCAGGCTGAAAAAGCCA GCAAGAAAAAAGAACAAAAGGAAAACAACGGAGATAAATCAGAACTTGAAAGTGAACTTGTGCCACCCAAGGCGCCACAG CCTGAGCGTGACGTGGATCGTGCTGAAGATATCAGCTCCCTCGATCATCAAAACGATGGGGGCAACGAACCGCACCCCTG A
Upstream 100 bases:
>100_bases CAATATGCAAGGAGCCATTGTGCACAAACCTCTGTCATGGATAACGCTGGGCACCCTGTCATTACTCGCCACTCTGGCCC AACCCGTTTGGGCCACCGAG
Downstream 100 bases:
>100_bases TGAACCTGCTCAGCCGCAGCCTGGAACCTAGCCCCTGGCTGCGGCAACTCGGCCCGGTTGTTTGCTCCAAGTGTTATTTC ACCACAATTTGATCGCGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: Deacylase; Ectoine Utilization Protein EutE; Succinylglutamate Desuccinylase / Aspartoacylase Family; Succinate Dehydrogenase Subunit Sdh; Succinate Dehydrogenase Subunit; Succinylglutamatedesuccinylase/Aspartoacylase; Deacylase-Like; Succinylglutamate Desuccinylase; Serine Protease; Aminoacylase-2/Carboxypeptidase-Z Family Hydrolase; AstE/AspA Family Protein; N-Acetyl Diamonbutyric Acid Acylase
Number of amino acids: Translated: 426; Mature: 426
Protein sequence:
>426_residues MEDEERALERQQETDADAPNKPPHRIESSNTDHSDTNEATGEAEPAGPDPLPLLGQRVQPGTFATLHWTPDQSFASIATP VPVLVAHGLKPGPKLCLTAAIHGDELNGIEMVRRLMYELEPNELAGTVIGVPIVNLDGFRSGSRYLSDRRDLNRYFPGNK DGSAASRVAHSLFGNIVSHCDYLVDLHTGSQKRINQPQLRADLDNQDVVAFAKHFGGMTVLHSPGVTGMLRDAAVKEGIV AVTMEAGGPNRLETQAVSYGVQAIETLLENLEMRKASRFWSAPQPVFFESEWIRASQGGILLSEVELNDKVKKGQILGTV TDPISNTGSAIIAPYNGRVLGMAVNQVVHAGFAAFRIGEVKSTEEVEAQAEKASKKKEQKENNGDKSELESELVPPKAPQ PERDVDRAEDISSLDHQNDGGNEPHP
Sequences:
>Translated_426_residues MEDEERALERQQETDADAPNKPPHRIESSNTDHSDTNEATGEAEPAGPDPLPLLGQRVQPGTFATLHWTPDQSFASIATP VPVLVAHGLKPGPKLCLTAAIHGDELNGIEMVRRLMYELEPNELAGTVIGVPIVNLDGFRSGSRYLSDRRDLNRYFPGNK DGSAASRVAHSLFGNIVSHCDYLVDLHTGSQKRINQPQLRADLDNQDVVAFAKHFGGMTVLHSPGVTGMLRDAAVKEGIV AVTMEAGGPNRLETQAVSYGVQAIETLLENLEMRKASRFWSAPQPVFFESEWIRASQGGILLSEVELNDKVKKGQILGTV TDPISNTGSAIIAPYNGRVLGMAVNQVVHAGFAAFRIGEVKSTEEVEAQAEKASKKKEQKENNGDKSELESELVPPKAPQ PERDVDRAEDISSLDHQNDGGNEPHP >Mature_426_residues MEDEERALERQQETDADAPNKPPHRIESSNTDHSDTNEATGEAEPAGPDPLPLLGQRVQPGTFATLHWTPDQSFASIATP VPVLVAHGLKPGPKLCLTAAIHGDELNGIEMVRRLMYELEPNELAGTVIGVPIVNLDGFRSGSRYLSDRRDLNRYFPGNK DGSAASRVAHSLFGNIVSHCDYLVDLHTGSQKRINQPQLRADLDNQDVVAFAKHFGGMTVLHSPGVTGMLRDAAVKEGIV AVTMEAGGPNRLETQAVSYGVQAIETLLENLEMRKASRFWSAPQPVFFESEWIRASQGGILLSEVELNDKVKKGQILGTV TDPISNTGSAIIAPYNGRVLGMAVNQVVHAGFAAFRIGEVKSTEEVEAQAEKASKKKEQKENNGDKSELESELVPPKAPQ PERDVDRAEDISSLDHQNDGGNEPHP
Specific function: Unknown
COG id: COG3608
COG function: function code R; Predicted deacylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46261; Mature: 46261
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDEERALERQQETDADAPNKPPHRIESSNTDHSDTNEATGEAEPAGPDPLPLLGQRVQP CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCC GTFATLHWTPDQSFASIATPVPVLVAHGLKPGPKLCLTAAIHGDELNGIEMVRRLMYELE CEEEEEEECCCCCHHHHCCCHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCC PNELAGTVIGVPIVNLDGFRSGSRYLSDRRDLNRYFPGNKDGSAASRVAHSLFGNIVSHC CCHHCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH DYLVDLHTGSQKRINQPQLRADLDNQDVVAFAKHFGGMTVLHSPGVTGMLRDAAVKEGIV HEEEEECCCCHHCCCCCHHHCCCCCCHHHHHHHHHCCEEEEECCCCCHHHHHHHHHCCEE AVTMEAGGPNRLETQAVSYGVQAIETLLENLEMRKASRFWSAPQPVFFESEWIRASQGGI EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHEECCCCE LLSEVELNDKVKKGQILGTVTDPISNTGSAIIAPYNGRVLGMAVNQVVHAGFAAFRIGEV EEEEECCCCCHHCCEEEEEECCCCCCCCCEEEECCCCEEEHHHHHHHHHHHHHHEEECCC KSTEEVEAQAEKASKKKEQKENNGDKSELESELVPPKAPQPERDVDRAEDISSLDHQNDG CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCC GNEPHP CCCCCC >Mature Secondary Structure MEDEERALERQQETDADAPNKPPHRIESSNTDHSDTNEATGEAEPAGPDPLPLLGQRVQP CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCC GTFATLHWTPDQSFASIATPVPVLVAHGLKPGPKLCLTAAIHGDELNGIEMVRRLMYELE CEEEEEEECCCCCHHHHCCCHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCC PNELAGTVIGVPIVNLDGFRSGSRYLSDRRDLNRYFPGNKDGSAASRVAHSLFGNIVSHC CCHHCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH DYLVDLHTGSQKRINQPQLRADLDNQDVVAFAKHFGGMTVLHSPGVTGMLRDAAVKEGIV HEEEEECCCCHHCCCCCHHHCCCCCCHHHHHHHHHCCEEEEECCCCCHHHHHHHHHCCEE AVTMEAGGPNRLETQAVSYGVQAIETLLENLEMRKASRFWSAPQPVFFESEWIRASQGGI EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHEECCCCE LLSEVELNDKVKKGQILGTVTDPISNTGSAIIAPYNGRVLGMAVNQVVHAGFAAFRIGEV EEEEECCCCCHHCCEEEEEECCCCCCCCCEEEECCCCEEEHHHHHHHHHHHHHHEEECCC KSTEEVEAQAEKASKKKEQKENNGDKSELESELVPPKAPQPERDVDRAEDISSLDHQNDG CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCC GNEPHP CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA