| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110834463
Identifier: 110834463
GI number: 110834463
Start: 1833714
End: 1834310
Strand: Direct
Name: 110834463
Synonym: ABO_1602
Alternate gene names: NA
Gene position: 1833714-1834310 (Clockwise)
Preceding gene: 110834462
Following gene: 110834464
Centisome position: 58.77
GC content: 57.12
Gene sequence:
>597_bases GTGGATGACATGACCGCACCCCGCGCCGACTTTACTCACATGAAGGAGGGCACCGGCGAGGACTGGCAGATCATTGCCAA ATCCTTCGGTGAATTCAGCAAAGGCCTGCCCAATCGCATCATCACTCACCTGCGCCTGCTGGAAGGCGACTTCGGCGGCT TCAAGATCGACCGCTTCCAGCACTGCCTGCAAACCGCCACCTTGGCCCATCGCGACGGCAAAGATGACGAATATGTGGTC TGCGCATTGCTGCACGACATCGGCGATACCCTCGGCACCTTCAACCACGCGGACGTGGCCGCCGTGCTGTTAGAGCCTTT CGTCAGCGAGGCCAACCACTGGATGGTGAAACACCACGCCATCTTCCAAGGCTACTATTTCTTCCACTACCTGGGCATGA ATCGCGACATGCGCGAGAACTTCAAAGATCACCCGCACTATCGGCAAACCCTGGAGTTCGTCAGCAAATACGATTCGCCG GCATTCGACCCGGAGGGAGAAACCCTGCCACTGGATTACTTTGAACCCATGCTGCGCAAGGTTTTTGCCGAGCCGCGTAA GTCACTCTATAAAGAAGCCATGGCGGAGCAAGGCTAG
Upstream 100 bases:
>100_bases GCACAGGTCACCAAGGGCATGGGCGGCAACCTTGCGTGGCCCGGCCTGCTGCGCAAGCTGGATCGCAACAACCCCGGTTA CGCAGAATAAGGAGCGCACC
Downstream 100 bases:
>100_bases CCAGAACCTAACCACCCTCTTTGCCGTTTACCCCACCGTTTAACGGCAAAGAGGGATATCTTCACAAAACACCAACCAAA CAAACGTTTCTTCAGGAAAA
Product: phosphohydrolase family protein
Products: NA
Alternate protein names: Metal-Dependent Phosphohydrolase HD Subdomain; Metal-Dependent Phosphohydrolase; HD Domain Protein; Phosphohydrolase; Phosphohydrolase Family Protein; HD Phosphohydrolase-Like Protein; Metal-Dependent Phosphohydrolase HD Subdomain Protein
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MDDMTAPRADFTHMKEGTGEDWQIIAKSFGEFSKGLPNRIITHLRLLEGDFGGFKIDRFQHCLQTATLAHRDGKDDEYVV CALLHDIGDTLGTFNHADVAAVLLEPFVSEANHWMVKHHAIFQGYYFFHYLGMNRDMRENFKDHPHYRQTLEFVSKYDSP AFDPEGETLPLDYFEPMLRKVFAEPRKSLYKEAMAEQG
Sequences:
>Translated_198_residues MDDMTAPRADFTHMKEGTGEDWQIIAKSFGEFSKGLPNRIITHLRLLEGDFGGFKIDRFQHCLQTATLAHRDGKDDEYVV CALLHDIGDTLGTFNHADVAAVLLEPFVSEANHWMVKHHAIFQGYYFFHYLGMNRDMRENFKDHPHYRQTLEFVSKYDSP AFDPEGETLPLDYFEPMLRKVFAEPRKSLYKEAMAEQG >Mature_198_residues MDDMTAPRADFTHMKEGTGEDWQIIAKSFGEFSKGLPNRIITHLRLLEGDFGGFKIDRFQHCLQTATLAHRDGKDDEYVV CALLHDIGDTLGTFNHADVAAVLLEPFVSEANHWMVKHHAIFQGYYFFHYLGMNRDMRENFKDHPHYRQTLEFVSKYDSP AFDPEGETLPLDYFEPMLRKVFAEPRKSLYKEAMAEQG
Specific function: Unknown
COG id: COG4341
COG function: function code R; Predicted HD phosphohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22938; Mature: 22938
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDMTAPRADFTHMKEGTGEDWQIIAKSFGEFSKGLPNRIITHLRLLEGDFGGFKIDRFQ CCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEHHHHH HCLQTATLAHRDGKDDEYVVCALLHDIGDTLGTFNHADVAAVLLEPFVSEANHWMVKHHA HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IFQGYYFFHYLGMNRDMRENFKDHPHYRQTLEFVSKYDSPAFDPEGETLPLDYFEPMLRK HHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH VFAEPRKSLYKEAMAEQG HHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDDMTAPRADFTHMKEGTGEDWQIIAKSFGEFSKGLPNRIITHLRLLEGDFGGFKIDRFQ CCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEHHHHH HCLQTATLAHRDGKDDEYVVCALLHDIGDTLGTFNHADVAAVLLEPFVSEANHWMVKHHA HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IFQGYYFFHYLGMNRDMRENFKDHPHYRQTLEFVSKYDSPAFDPEGETLPLDYFEPMLRK HHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH VFAEPRKSLYKEAMAEQG HHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA