Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110834396

Identifier: 110834396

GI number: 110834396

Start: 1756148

End: 1758808

Strand: Direct

Name: 110834396

Synonym: ABO_1535

Alternate gene names: NA

Gene position: 1756148-1758808 (Clockwise)

Preceding gene: 110834395

Following gene: 110834397

Centisome position: 56.28

GC content: 54.15

Gene sequence:

>2661_bases
ATGACCCATCGATTGTTTAATGCCTATTGCCGGGCTGTACTGGCACACCCTGTTTTCTGGCTAGTGCTACTGGTGCTCAT
ATGCGGCATTGCCGGAACCCAAGCCCGCAATTTCAAGATCGACGCGTCAGCGGATTCCATGGTGTTGGAAAATGACTCGG
CACTGCAGTATTACCGCAAAATCGCCAAACAATATGGCGGCAGTGATTTCCTCGTCATTACCTATAGCCCTAAAGACAAA
CCGTTATTCGAGCAGAGCAGCTTGGAACACCTGCAATCCTTACAGCAGGCTCTCAAAAAGGTAAACCGCGTCAGTTCGGT
CTACAGCATGTTGGATGTGCCCTTGCTGTTCAGCCCTCAGGTGGAATTCAGTGACCTAGCCAATGAATATCGCACCCTCA
CTAGCGAAGGCGTAGACCTATCGTTGGCTGAGAAAGAGTTCACCGATAAAAACCCGCTCTACGAAGACCTGCTGGTCAGC
GATGACGGCAACACCACCGCCCTGCTGGTGAGCTTCGAACGGGATCAGAAATATTTCGACCTGCTTTACAAGCGCAACGA
TCTGCGTGACCTGGAAGACAACGGCGCACTGGATGAACAAGGCCAGCAAGAGCTAGCAGCTGCCAGCCGTGCCTTCAGCG
ACTACAGCAGCCAGATTCAGCAACGCACTGCCGGTGAAATCGACCAGGTACGCAACATCATGGATGGCTACCGGAACGAG
GCCAACCTGTTCCTCGGTGGCGTCCCCATGATTACCACCGACTTAGTGCGCTTTATTCGTTCAGATTTAAAAGTGTTCGG
CGTTGGTGTACTGGTCTTCCTCATCCTTACCCTCTTCCTGATCTTCCGCCGCCCCCGTTGGGTGATCGTGCCGCTGGCCT
GCTGTGGCGTCACCGTACTGACCGTTACTGGCTGGCTGGGCTGGGTGGACTGGAAAGTGTCCGTCATCAGTAGCAACTAT
ATTTCCTTGCTGCTGATCATCACCATGTCCATCACCATTCACCTCACCGTGCGCTTTCGTGAGCTGCACGAAGAAAATCC
GCAGGCTAGCCAAAAATGGCTGATTCGCGAAACCGCCGCTCACATGATGCGCCCCAGCATTTATATGATCTTAACCACCA
TGGTGGGCTTCTCCTCACTGGTGATCAGCGGCATTCGCCCGGTGATTGACTTCGGCTGGATGATGACCCTGGGGCTGGGC
ATATCGCTAATCGTCTGCTTTCTTGTATTCCCAGCTCTGCTGGCACCGCTGGCAGCCGGCACCCCTCGACAAGGCCGTGA
CATCAGCCGCGAGCTAACCCTAGCCTTTGCCGGCTTTACCGAACGCCACCGCCCGCTGTTGCTATTGCTTGCCTTGGGTG
TAATCGCCACTTCCCTGTGGGGAATAAGCCGCCTCACCGTGGAAAACCGGTTTATTGATTACTTCCAGAAAGACACGGAA
ATTTACCAGGGCATGCTGCAGATTGATCGCAAGCTAGGCGGCACCACTCCGCTGGATATCGTTATCGATGCGCCCAAAAC
CACAGCGGCGCAGAACGCCGCACTGGGGCAACCCGCCACCGGTTGGGATGGCGCCAGCGTAGACGACGAGATCAGCGACC
CGTTTGCATCTGATAGCGCTAACGAGGTGGATAACACAGACCCCTTCGCAGACAGAGACCCGTTCGCCACAGACAGTGCC
GATCCGTTTGCCGACAGCGATCCTTTTGCCACCGAATCCGGCACAGACCCCTTCGCCTCTACACCAGAGAAAACCAAACC
TAACCCGCTCAAAGGAGCCTACTGGTTTACCCCTGCCCGGCTGGGTCAGCTAGTAGATATTCAGAATTATCTAGAGTCTC
TACCAGAAACCGGCAAAGTGCTCTCCATTGCTACTACCTACGAGGTAGCAGAAAAACTCAATGGACGCCCACTCAGCTAT
GTGCAGCTAATGCTGCTAGCCAGTTTTATTCCGGAGGACTTACGCAGCCAGCTAGTTAAACCCTACCTGTCCGACGACGG
TAACCAGGTACGCATTAGCATACGGGTGATCGATTCCGACAAGAATCTGAACCGCAACGAATTGTTGGCGAAAATCCGCT
CCGATCTGGAAAACAACTTCGGCTTGCAGCCGGAACAGGTACACCTCACAGGCGCCATGGTGCTCTACAACAATATGCTG
CAAAGCCTGTTCGACTCACAGATTAAAACGTTGGGTTACGTTTTTGCGGCTATCCTGTTCATGCTATTACTCCTGTTCCG
CAGCCTCCCCGTGGCTCTGATCAGCATGGTTCCCAGCCTGATCTCCGCCTCCCTGGTGCTAGGTTTGATGGGCTGGATCG
GCCTGCCGCTGGATTTAATGACCATTACCATTACCGCCATCTCCATTGGCATCGCCGTGGATGACACCATTCACTACATT
CATCGCTTCCATGAAGAGCTGCCAAAAGACCACGACTACGTGGCCACCATGAAGCGCTGTCATGGCTCCATTGGCAAAGC
CATGTACTACACTTCGCTTACCATCATTGCCGGCTTCTCCATCCTGGCCCTATCCAGCTTCAACCCCACCGTTTACTTCG
GCCTGCTCACCGGCCTGGCGATGCTGGTCGCCCTGCTTAGCAACCTGACCCTGCTACCCGCTTTGCTGATTACAGTAAAA
CCGAAACTGAAAGCTGGCTAA

Upstream 100 bases:

>100_bases
GCTATGTTCTGATTTTCCCCGCCGTACGATATTTGAATACCGATACTTGAGCATCAGGCCTGCGCTTTTGCCAACCTCTT
GAACGTTGACCGGACACACC

Downstream 100 bases:

>100_bases
AACCCCGGCGCCCATCACGGGAGCTTGCCTGCAAGCGATTACCACCATCGGTGATCGCTGACAGGCAAGCCTCTCTACCC
TTCATATCCTTTTATATCCC

Product: transport protein

Products: NA

Alternate protein names: Exporter Of RND Superfamily Protein-Like Protein; Resistance-Nodulation- Family Transporter; Efflux Transporter Hydrophobe/Amphiphile Efflux-3 Family; Histidine Kinase; Patched Family Protein; Exporter; Sterol-Sensing 5tm Box Domain Protein; Resistance-Nodulation-Cell Division Superfamily Transporter

Number of amino acids: Translated: 886; Mature: 885

Protein sequence:

>886_residues
MTHRLFNAYCRAVLAHPVFWLVLLVLICGIAGTQARNFKIDASADSMVLENDSALQYYRKIAKQYGGSDFLVITYSPKDK
PLFEQSSLEHLQSLQQALKKVNRVSSVYSMLDVPLLFSPQVEFSDLANEYRTLTSEGVDLSLAEKEFTDKNPLYEDLLVS
DDGNTTALLVSFERDQKYFDLLYKRNDLRDLEDNGALDEQGQQELAAASRAFSDYSSQIQQRTAGEIDQVRNIMDGYRNE
ANLFLGGVPMITTDLVRFIRSDLKVFGVGVLVFLILTLFLIFRRPRWVIVPLACCGVTVLTVTGWLGWVDWKVSVISSNY
ISLLLIITMSITIHLTVRFRELHEENPQASQKWLIRETAAHMMRPSIYMILTTMVGFSSLVISGIRPVIDFGWMMTLGLG
ISLIVCFLVFPALLAPLAAGTPRQGRDISRELTLAFAGFTERHRPLLLLLALGVIATSLWGISRLTVENRFIDYFQKDTE
IYQGMLQIDRKLGGTTPLDIVIDAPKTTAAQNAALGQPATGWDGASVDDEISDPFASDSANEVDNTDPFADRDPFATDSA
DPFADSDPFATESGTDPFASTPEKTKPNPLKGAYWFTPARLGQLVDIQNYLESLPETGKVLSIATTYEVAEKLNGRPLSY
VQLMLLASFIPEDLRSQLVKPYLSDDGNQVRISIRVIDSDKNLNRNELLAKIRSDLENNFGLQPEQVHLTGAMVLYNNML
QSLFDSQIKTLGYVFAAILFMLLLLFRSLPVALISMVPSLISASLVLGLMGWIGLPLDLMTITITAISIGIAVDDTIHYI
HRFHEELPKDHDYVATMKRCHGSIGKAMYYTSLTIIAGFSILALSSFNPTVYFGLLTGLAMLVALLSNLTLLPALLITVK
PKLKAG

Sequences:

>Translated_886_residues
MTHRLFNAYCRAVLAHPVFWLVLLVLICGIAGTQARNFKIDASADSMVLENDSALQYYRKIAKQYGGSDFLVITYSPKDK
PLFEQSSLEHLQSLQQALKKVNRVSSVYSMLDVPLLFSPQVEFSDLANEYRTLTSEGVDLSLAEKEFTDKNPLYEDLLVS
DDGNTTALLVSFERDQKYFDLLYKRNDLRDLEDNGALDEQGQQELAAASRAFSDYSSQIQQRTAGEIDQVRNIMDGYRNE
ANLFLGGVPMITTDLVRFIRSDLKVFGVGVLVFLILTLFLIFRRPRWVIVPLACCGVTVLTVTGWLGWVDWKVSVISSNY
ISLLLIITMSITIHLTVRFRELHEENPQASQKWLIRETAAHMMRPSIYMILTTMVGFSSLVISGIRPVIDFGWMMTLGLG
ISLIVCFLVFPALLAPLAAGTPRQGRDISRELTLAFAGFTERHRPLLLLLALGVIATSLWGISRLTVENRFIDYFQKDTE
IYQGMLQIDRKLGGTTPLDIVIDAPKTTAAQNAALGQPATGWDGASVDDEISDPFASDSANEVDNTDPFADRDPFATDSA
DPFADSDPFATESGTDPFASTPEKTKPNPLKGAYWFTPARLGQLVDIQNYLESLPETGKVLSIATTYEVAEKLNGRPLSY
VQLMLLASFIPEDLRSQLVKPYLSDDGNQVRISIRVIDSDKNLNRNELLAKIRSDLENNFGLQPEQVHLTGAMVLYNNML
QSLFDSQIKTLGYVFAAILFMLLLLFRSLPVALISMVPSLISASLVLGLMGWIGLPLDLMTITITAISIGIAVDDTIHYI
HRFHEELPKDHDYVATMKRCHGSIGKAMYYTSLTIIAGFSILALSSFNPTVYFGLLTGLAMLVALLSNLTLLPALLITVK
PKLKAG
>Mature_885_residues
THRLFNAYCRAVLAHPVFWLVLLVLICGIAGTQARNFKIDASADSMVLENDSALQYYRKIAKQYGGSDFLVITYSPKDKP
LFEQSSLEHLQSLQQALKKVNRVSSVYSMLDVPLLFSPQVEFSDLANEYRTLTSEGVDLSLAEKEFTDKNPLYEDLLVSD
DGNTTALLVSFERDQKYFDLLYKRNDLRDLEDNGALDEQGQQELAAASRAFSDYSSQIQQRTAGEIDQVRNIMDGYRNEA
NLFLGGVPMITTDLVRFIRSDLKVFGVGVLVFLILTLFLIFRRPRWVIVPLACCGVTVLTVTGWLGWVDWKVSVISSNYI
SLLLIITMSITIHLTVRFRELHEENPQASQKWLIRETAAHMMRPSIYMILTTMVGFSSLVISGIRPVIDFGWMMTLGLGI
SLIVCFLVFPALLAPLAAGTPRQGRDISRELTLAFAGFTERHRPLLLLLALGVIATSLWGISRLTVENRFIDYFQKDTEI
YQGMLQIDRKLGGTTPLDIVIDAPKTTAAQNAALGQPATGWDGASVDDEISDPFASDSANEVDNTDPFADRDPFATDSAD
PFADSDPFATESGTDPFASTPEKTKPNPLKGAYWFTPARLGQLVDIQNYLESLPETGKVLSIATTYEVAEKLNGRPLSYV
QLMLLASFIPEDLRSQLVKPYLSDDGNQVRISIRVIDSDKNLNRNELLAKIRSDLENNFGLQPEQVHLTGAMVLYNNMLQ
SLFDSQIKTLGYVFAAILFMLLLLFRSLPVALISMVPSLISASLVLGLMGWIGLPLDLMTITITAISIGIAVDDTIHYIH
RFHEELPKDHDYVATMKRCHGSIGKAMYYTSLTIIAGFSILALSSFNPTVYFGLLTGLAMLVALLSNLTLLPALLITVKP
KLKAG

Specific function: Unknown

COG id: COG1033

COG function: function code R; Predicted exporters of the RND superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 98452; Mature: 98321

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: PS50156 SSD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHRLFNAYCRAVLAHPVFWLVLLVLICGIAGTQARNFKIDASADSMVLENDSALQYYRK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEECCCHHHHHHHH
IAKQYGGSDFLVITYSPKDKPLFEQSSLEHLQSLQQALKKVNRVSSVYSMLDVPLLFSPQ
HHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCC
VEFSDLANEYRTLTSEGVDLSLAEKEFTDKNPLYEDLLVSDDGNTTALLVSFERDQKYFD
CCHHHHHHHHHHHHCCCCCEEEHHHHCCCCCCCHHHHEEECCCCCEEEEEEECCCHHHHH
LLYKRNDLRDLEDNGALDEQGQQELAAASRAFSDYSSQIQQRTAGEIDQVRNIMDGYRNE
HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC
ANLFLGGVPMITTDLVRFIRSDLKVFGVGVLVFLILTLFLIFRRPRWVIVPLACCGVTVL
CCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHH
TVTGWLGWVDWKVSVISSNYISLLLIITMSITIHLTVRFRELHEENPQASQKWLIRETAA
HHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHEEEEEEEEHHHHCCCCCHHHHHHHHHHHH
HMMRPSIYMILTTMVGFSSLVISGIRPVIDFGWMMTLGLGISLIVCFLVFPALLAPLAAG
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TPRQGRDISRELTLAFAGFTERHRPLLLLLALGVIATSLWGISRLTVENRFIDYFQKDTE
CCCCCCCHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IYQGMLQIDRKLGGTTPLDIVIDAPKTTAAQNAALGQPATGWDGASVDDEISDPFASDSA
HHHHHHHHHHHHCCCCCEEEEEECCCCHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCCC
NEVDNTDPFADRDPFATDSADPFADSDPFATESGTDPFASTPEKTKPNPLKGAYWFTPAR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECHHH
LGQLVDIQNYLESLPETGKVLSIATTYEVAEKLNGRPLSYVQLMLLASFIPEDLRSQLVK
HHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHH
PYLSDDGNQVRISIRVIDSDKNLNRNELLAKIRSDLENNFGLQPEQVHLTGAMVLYNNML
HHHCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHH
QSLFDSQIKTLGYVFAAILFMLLLLFRSLPVALISMVPSLISASLVLGLMGWIGLPLDLM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
TITITAISIGIAVDDTIHYIHRFHEELPKDHDYVATMKRCHGSIGKAMYYTSLTIIAGFS
HHHHHHHHEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILALSSFNPTVYFGLLTGLAMLVALLSNLTLLPALLITVKPKLKAG
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
THRLFNAYCRAVLAHPVFWLVLLVLICGIAGTQARNFKIDASADSMVLENDSALQYYRK
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEECCCHHHHHHHH
IAKQYGGSDFLVITYSPKDKPLFEQSSLEHLQSLQQALKKVNRVSSVYSMLDVPLLFSPQ
HHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCC
VEFSDLANEYRTLTSEGVDLSLAEKEFTDKNPLYEDLLVSDDGNTTALLVSFERDQKYFD
CCHHHHHHHHHHHHCCCCCEEEHHHHCCCCCCCHHHHEEECCCCCEEEEEEECCCHHHHH
LLYKRNDLRDLEDNGALDEQGQQELAAASRAFSDYSSQIQQRTAGEIDQVRNIMDGYRNE
HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC
ANLFLGGVPMITTDLVRFIRSDLKVFGVGVLVFLILTLFLIFRRPRWVIVPLACCGVTVL
CCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHH
TVTGWLGWVDWKVSVISSNYISLLLIITMSITIHLTVRFRELHEENPQASQKWLIRETAA
HHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHEEEEEEEEHHHHCCCCCHHHHHHHHHHHH
HMMRPSIYMILTTMVGFSSLVISGIRPVIDFGWMMTLGLGISLIVCFLVFPALLAPLAAG
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TPRQGRDISRELTLAFAGFTERHRPLLLLLALGVIATSLWGISRLTVENRFIDYFQKDTE
CCCCCCCHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IYQGMLQIDRKLGGTTPLDIVIDAPKTTAAQNAALGQPATGWDGASVDDEISDPFASDSA
HHHHHHHHHHHHCCCCCEEEEEECCCCHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCCC
NEVDNTDPFADRDPFATDSADPFADSDPFATESGTDPFASTPEKTKPNPLKGAYWFTPAR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECHHH
LGQLVDIQNYLESLPETGKVLSIATTYEVAEKLNGRPLSYVQLMLLASFIPEDLRSQLVK
HHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHH
PYLSDDGNQVRISIRVIDSDKNLNRNELLAKIRSDLENNFGLQPEQVHLTGAMVLYNNML
HHHCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHH
QSLFDSQIKTLGYVFAAILFMLLLLFRSLPVALISMVPSLISASLVLGLMGWIGLPLDLM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
TITITAISIGIAVDDTIHYIHRFHEELPKDHDYVATMKRCHGSIGKAMYYTSLTIIAGFS
HHHHHHHHEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILALSSFNPTVYFGLLTGLAMLVALLSNLTLLPALLITVKPKLKAG
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA