Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110834389

Identifier: 110834389

GI number: 110834389

Start: 1749666

End: 1750283

Strand: Direct

Name: 110834389

Synonym: ABO_1528

Alternate gene names: NA

Gene position: 1749666-1750283 (Clockwise)

Preceding gene: 110834384

Following gene: 110834390

Centisome position: 56.08

GC content: 55.99

Gene sequence:

>618_bases
ATGCGACCGCTTTTCCGATACCTCCTACCCGCTTTACCTGCCCTACTCGTTGCCGGTTGTGCCAGCACCACTGAGGTAGA
AACCCGCTACACCGACGGCGGCAGCCACCCACCGCAAGACTCTTTGCTATTGGTTGCCCACACGCCAGAAGGCAACATCC
GTGAAACTTGGGAATTGACCTGCAAGGATATATTTTCAAGTGATTCATTGACCGTTTTGCTCAGCCACCAAGAATTACCG
TTATGGTATGAAGGCGGAAAAGAAAGCATCCTCGACTGGGCGCAAGAAAACGATGTCGACCGAATTCTTGTGGTTGAGCT
TACCCACATGCTGATTGATGCCGCAGCACCGCCGACAGTCGGCAACCAGCTCAATCCCATGGGACAATTTGCCGGTGACG
TGAAGCCAACTTGGCAAGTCGGCATTGGCGGTGAACTGGCCGAAGACGAGGAGCCCACAGCCCTGCGGCAACATGGCGCT
GAGCTGATTAACGCCGACGGCAAGCCTCTGTGGACAGGTATCGCCACCACCCACGAAGCCAGCAACGCCGTTGCCATTGC
CAAAAGCCAATGCTCGGCCCTGCGTCGCACCTTGCGCGAACAAGCTCTTGTTCCCTGA

Upstream 100 bases:

>100_bases
CATGGCAAGAGATTGTGCACCAATTGATGTGCCGGCCCCTTGGCGCTGCTACACTGGAGCCAAGCCATTGAAGGCACCGT
ATTCGCCGCCGGAGATTTTC

Downstream 100 bases:

>100_bases
TTGACCCACGTCTGTCAGGGAACGGTAAAACGGACTCTGACAACGGAAATGAACATTATGACAGGCCCTCTCCACGGACT
GACTTTCATCGAACTGGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MRPLFRYLLPALPALLVAGCASTTEVETRYTDGGSHPPQDSLLLVAHTPEGNIRETWELTCKDIFSSDSLTVLLSHQELP
LWYEGGKESILDWAQENDVDRILVVELTHMLIDAAAPPTVGNQLNPMGQFAGDVKPTWQVGIGGELAEDEEPTALRQHGA
ELINADGKPLWTGIATTHEASNAVAIAKSQCSALRRTLREQALVP

Sequences:

>Translated_205_residues
MRPLFRYLLPALPALLVAGCASTTEVETRYTDGGSHPPQDSLLLVAHTPEGNIRETWELTCKDIFSSDSLTVLLSHQELP
LWYEGGKESILDWAQENDVDRILVVELTHMLIDAAAPPTVGNQLNPMGQFAGDVKPTWQVGIGGELAEDEEPTALRQHGA
ELINADGKPLWTGIATTHEASNAVAIAKSQCSALRRTLREQALVP
>Mature_205_residues
MRPLFRYLLPALPALLVAGCASTTEVETRYTDGGSHPPQDSLLLVAHTPEGNIRETWELTCKDIFSSDSLTVLLSHQELP
LWYEGGKESILDWAQENDVDRILVVELTHMLIDAAAPPTVGNQLNPMGQFAGDVKPTWQVGIGGELAEDEEPTALRQHGA
ELINADGKPLWTGIATTHEASNAVAIAKSQCSALRRTLREQALVP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22298; Mature: 22298

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPLFRYLLPALPALLVAGCASTTEVETRYTDGGSHPPQDSLLLVAHTPEGNIRETWELT
CCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCHHHHHH
CKDIFSSDSLTVLLSHQELPLWYEGGKESILDWAQENDVDRILVVELTHMLIDAAAPPTV
HHHHCCCCCEEEEEECCCCCEEEECCHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCCCCC
GNQLNPMGQFAGDVKPTWQVGIGGELAEDEEPTALRQHGAELINADGKPLWTGIATTHEA
CCCCCHHHHHCCCCCCCEEECCCCCCCCCCCCHHHHHCCHHHHCCCCCEEEECCCCCCCC
SNAVAIAKSQCSALRRTLREQALVP
CCEEEHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRPLFRYLLPALPALLVAGCASTTEVETRYTDGGSHPPQDSLLLVAHTPEGNIRETWELT
CCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCHHHHHH
CKDIFSSDSLTVLLSHQELPLWYEGGKESILDWAQENDVDRILVVELTHMLIDAAAPPTV
HHHHCCCCCEEEEEECCCCCEEEECCHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCCCCC
GNQLNPMGQFAGDVKPTWQVGIGGELAEDEEPTALRQHGAELINADGKPLWTGIATTHEA
CCCCCHHHHHCCCCCCCEEECCCCCCCCCCCCHHHHHCCHHHHCCCCCEEEECCCCCCCC
SNAVAIAKSQCSALRRTLREQALVP
CCEEEHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA