| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110834367
Identifier: 110834367
GI number: 110834367
Start: 1718786
End: 1719493
Strand: Direct
Name: 110834367
Synonym: ABO_1506
Alternate gene names: NA
Gene position: 1718786-1719493 (Clockwise)
Preceding gene: 110834366
Following gene: 110834368
Centisome position: 55.09
GC content: 56.78
Gene sequence:
>708_bases ATGGGGTTAAAAACACAGGGGGCGGATACACTGCCGCACACATCCTTATCCGAGCAAACGGCTTACCGCTTGGTCAACGG AAAATATCCCCCTATCGCGATCTTCGATGACGTGGCCGACCAAGCGGATTTTGATGCACTGTACGCCGTGCAGGCGCTGA CCAACCCGCGCCTACAAAATGATATCGGCGATCTGAATCGGGTCCCCCCGGAGCAGCGCCCATGGGGCATTCCCGGCTGC AACTACGCCTTGGGGCCCTTTGTGCATGTCAATCCAGCAGGGTCGCGCTTCTCTGATGGCCATTTCGGGGTATTCTATTG CGCCGACCGCATGGCGACCGCCATTGCAGAGACCCGCTATCACCAACAGCGTTATTTTCAGCAAGTCGATGGGCTCAAGT ATGACCGCATTGTGATGCGCGGCCTGAAGGTACACTTCACCGCCACCCTCGTAGACATCACCCCGGCTGATCACCACCCT CAGTGGCACGCAGCCGATGACTACACCGCCGCGCATCAGCTTGGTCGGCAATTACGCGAACAACAGCGCAACGGCATCCA TTACGAATCTGTCCGCGCCGTCGGGCGTTATTGTTATGCCCTGCTAACCCCTCAAGTCATCGCCAGTATTACTCCCTGTG CTCACTACGAATATATTTGGGACGGCGAAACAATCGCCCACACGCTTACCATTCGCGGCTTTAACTGA
Upstream 100 bases:
>100_bases CCTTTTTCAATGGCCTCACCCCTATGGACATCATGAGCAACGGCCGGGTTGCCAGCCTTTATGAAGTGCACCGCCAGCTC GATACCCTTCGAGGCGGTCA
Downstream 100 bases:
>100_bases AACACCGCCGTCGCGCACCTTCTGCGGCAATATGCCGCATCCCTCTTCCCTGACACATGCCTATGCTGCGAGCCTAATTT AATTCGGTTCGGGAAAATCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MGLKTQGADTLPHTSLSEQTAYRLVNGKYPPIAIFDDVADQADFDALYAVQALTNPRLQNDIGDLNRVPPEQRPWGIPGC NYALGPFVHVNPAGSRFSDGHFGVFYCADRMATAIAETRYHQQRYFQQVDGLKYDRIVMRGLKVHFTATLVDITPADHHP QWHAADDYTAAHQLGRQLREQQRNGIHYESVRAVGRYCYALLTPQVIASITPCAHYEYIWDGETIAHTLTIRGFN
Sequences:
>Translated_235_residues MGLKTQGADTLPHTSLSEQTAYRLVNGKYPPIAIFDDVADQADFDALYAVQALTNPRLQNDIGDLNRVPPEQRPWGIPGC NYALGPFVHVNPAGSRFSDGHFGVFYCADRMATAIAETRYHQQRYFQQVDGLKYDRIVMRGLKVHFTATLVDITPADHHP QWHAADDYTAAHQLGRQLREQQRNGIHYESVRAVGRYCYALLTPQVIASITPCAHYEYIWDGETIAHTLTIRGFN >Mature_234_residues GLKTQGADTLPHTSLSEQTAYRLVNGKYPPIAIFDDVADQADFDALYAVQALTNPRLQNDIGDLNRVPPEQRPWGIPGCN YALGPFVHVNPAGSRFSDGHFGVFYCADRMATAIAETRYHQQRYFQQVDGLKYDRIVMRGLKVHFTATLVDITPADHHPQ WHAADDYTAAHQLGRQLREQQRNGIHYESVRAVGRYCYALLTPQVIASITPCAHYEYIWDGETIAHTLTIRGFN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26502; Mature: 26371
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLKTQGADTLPHTSLSEQTAYRLVNGKYPPIAIFDDVADQADFDALYAVQALTNPRLQN CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEHHHCCCCCHHHHHHHHHHCCCHHHH DIGDLNRVPPEQRPWGIPGCNYALGPFVHVNPAGSRFSDGHFGVFYCADRMATAIAETRY HHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEHHHHHHHHHHHHHH HQQRYFQQVDGLKYDRIVMRGLKVHFTATLVDITPADHHPQWHAADDYTAAHQLGRQLRE HHHHHHHHHCCCCHHHHHHHCCEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH QQRNGIHYESVRAVGRYCYALLTPQVIASITPCAHYEYIWDGETIAHTLTIRGFN HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEEEEECCC >Mature Secondary Structure GLKTQGADTLPHTSLSEQTAYRLVNGKYPPIAIFDDVADQADFDALYAVQALTNPRLQN CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEHHHCCCCCHHHHHHHHHHCCCHHHH DIGDLNRVPPEQRPWGIPGCNYALGPFVHVNPAGSRFSDGHFGVFYCADRMATAIAETRY HHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEHHHHHHHHHHHHHH HQQRYFQQVDGLKYDRIVMRGLKVHFTATLVDITPADHHPQWHAADDYTAAHQLGRQLRE HHHHHHHHHCCCCHHHHHHHCCEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH QQRNGIHYESVRAVGRYCYALLTPQVIASITPCAHYEYIWDGETIAHTLTIRGFN HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]