| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110834192
Identifier: 110834192
GI number: 110834192
Start: 1512085
End: 1512873
Strand: Direct
Name: 110834192
Synonym: ABO_1331
Alternate gene names: NA
Gene position: 1512085-1512873 (Clockwise)
Preceding gene: 110834187
Following gene: 110834194
Centisome position: 48.46
GC content: 55.13
Gene sequence:
>789_bases ATGGCGAGGACGTGGGTGTTACTACGTGGCTTGGTTCGTGAAAAGCGGCATTGGGAGGGTTTTCCCGCTCATTTTCAGGC GGCAGTACCGCAAGATAGCGTGATAACGTTGGATTTGCCGGGCAACGGTGAATTTTGCCAGGAAAACAGCCCTACACGCA TTGCAGACATGGTTGCCCATGCCCGAGGGCAACTTCAGAAGCAGGGCCATCAAGGGCCTTACCACGTTGTGGCACTGTCA TTGGGTGCAATGGTGGCTGTGCAGTGGCTATGTCAAGCGCCCCATGAGGTGGCGTTTGCAGCCCTAATCAATACCAGTGC AAGCCGATATAGCCCGTTCTGGCAACGTCTTCGTCCGGCCAACTACCGCAGACTTCTCAAGGACGCGGTGTTTAGTCGAA ACGCATTGCAAAAAGAAAGCGCGATTCTGGAAATTACCTCTAATATGCGCAGCCAAGACTACCTCCGTGCCCTTGCGGAT AAGTGGCGCGATTATGCCGTGTCTCAGCCGGTTTCTCTGGGGAATAGCCTGCGCCAATTGCTGGCAGCCATACGTTTTCG CGCCCCCGCGGCACTACCCAGTAGTGTACCCGTGGTCATTATTAATGGCGGAGGAGATCGTTTGGTCGGCCCCAGCTGCT CACGCAGCCTAGCCGTAGCCTGGCAGTTGCCGCTTAAAGTTCATACAGAAGCCGGCCATGATTTGCCACTGGATGCCCCT CAGTGGCTGATCAATACCTTGCTGGAAAGTGTGGCAGATGCAGCGCAAAGCTTACCGGGGTCAGTTTAA
Upstream 100 bases:
>100_bases TACGTGCCATAGTCGCGAGGAAACTCCATTTGCCATCCAGAACTCCGGTGGCATTCTAGCCTTTATTATAAAGCGGGTCA TTGTCCTAAGGAGAGATCAA
Downstream 100 bases:
>100_bases GGTTCTAGGCTCTAGGCAGATTTATGTGAGTGAGCAGTCTTTTAAAATCTGCTAGAGCCATAAAAAAACCGGCACGAAGG CCGGTTTGTATTTAACAAAG
Product: hydrolase
Products: NA
Alternate protein names: Alpha/Beta Fold Family Hydrolase; Alpha/Beta Hydrolase Fold Protein; Hydrolase; Alpha/Beta Superfamily Hydrolase; Alpha/Beta Fold Superfamily Hydrolase; Hydrolase Or Acyltransferase-Like Protein; Alpha/Beta Hydrolase Family Protein; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Family Hydrolase
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MARTWVLLRGLVREKRHWEGFPAHFQAAVPQDSVITLDLPGNGEFCQENSPTRIADMVAHARGQLQKQGHQGPYHVVALS LGAMVAVQWLCQAPHEVAFAALINTSASRYSPFWQRLRPANYRRLLKDAVFSRNALQKESAILEITSNMRSQDYLRALAD KWRDYAVSQPVSLGNSLRQLLAAIRFRAPAALPSSVPVVIINGGGDRLVGPSCSRSLAVAWQLPLKVHTEAGHDLPLDAP QWLINTLLESVADAAQSLPGSV
Sequences:
>Translated_262_residues MARTWVLLRGLVREKRHWEGFPAHFQAAVPQDSVITLDLPGNGEFCQENSPTRIADMVAHARGQLQKQGHQGPYHVVALS LGAMVAVQWLCQAPHEVAFAALINTSASRYSPFWQRLRPANYRRLLKDAVFSRNALQKESAILEITSNMRSQDYLRALAD KWRDYAVSQPVSLGNSLRQLLAAIRFRAPAALPSSVPVVIINGGGDRLVGPSCSRSLAVAWQLPLKVHTEAGHDLPLDAP QWLINTLLESVADAAQSLPGSV >Mature_261_residues ARTWVLLRGLVREKRHWEGFPAHFQAAVPQDSVITLDLPGNGEFCQENSPTRIADMVAHARGQLQKQGHQGPYHVVALSL GAMVAVQWLCQAPHEVAFAALINTSASRYSPFWQRLRPANYRRLLKDAVFSRNALQKESAILEITSNMRSQDYLRALADK WRDYAVSQPVSLGNSLRQLLAAIRFRAPAALPSSVPVVIINGGGDRLVGPSCSRSLAVAWQLPLKVHTEAGHDLPLDAPQ WLINTLLESVADAAQSLPGSV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28806; Mature: 28675
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARTWVLLRGLVREKRHWEGFPAHFQAAVPQDSVITLDLPGNGEFCQENSPTRIADMVAH CCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHH ARGQLQKQGHQGPYHVVALSLGAMVAVQWLCQAPHEVAFAALINTSASRYSPFWQRLRPA HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHCCCH NYRRLLKDAVFSRNALQKESAILEITSNMRSQDYLRALADKWRDYAVSQPVSLGNSLRQL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LAAIRFRAPAALPSSVPVVIINGGGDRLVGPSCSRSLAVAWQLPLKVHTEAGHDLPLDAP HHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCCCCCH QWLINTLLESVADAAQSLPGSV HHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure ARTWVLLRGLVREKRHWEGFPAHFQAAVPQDSVITLDLPGNGEFCQENSPTRIADMVAH CHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHH ARGQLQKQGHQGPYHVVALSLGAMVAVQWLCQAPHEVAFAALINTSASRYSPFWQRLRPA HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHCCCH NYRRLLKDAVFSRNALQKESAILEITSNMRSQDYLRALADKWRDYAVSQPVSLGNSLRQL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LAAIRFRAPAALPSSVPVVIINGGGDRLVGPSCSRSLAVAWQLPLKVHTEAGHDLPLDAP HHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCCCCCH QWLINTLLESVADAAQSLPGSV HHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA