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The map label for this gene is ydiY [H]

Identifier: 110834187

GI number: 110834187

Start: 1506080

End: 1506865

Strand: Direct

Name: ydiY [H]

Synonym: ABO_1326

Alternate gene names: 110834187

Gene position: 1506080-1506865 (Clockwise)

Preceding gene: 110834186

Following gene: 110834192

Centisome position: 48.27

GC content: 51.65

Gene sequence:

>786_bases
ATGCGCAGTAAGACAATCGCTGCCATGCTGCTAACCGCCGGACTTCCGGCGGTTTCTGTAGCTGCGCAAGACGCAGCTGC
CGATAAGGGTAGTGAAGTTAGCAAATGGTCTGGCGACATTGGTGTCGGGCTGCTATTCAAGCGCGGTAACACCAATTCCG
ACTCTACCAATGCCAATGTCAACATGGCCCGGGACAGCGAGAAATGGCGGCATACATTCAAGGCTGATGCCAATAACGAG
AAGGAAGAAGATCCTGATACGGAAGAATATAACCGTACGGATGAGAACTACTTCGCTTCCTACAAGTTGGACCGCAAACT
CGGTGAAGATGCCAAGAACTACCTGTTCAATGTGCTGACCTACCAAAAAGATAATTTTTCGGGTTATCACTACGAAGCCA
GTTATGCCATCGGTGTGGGGCGTCGGTGGGTCGATTCGGATCGGCAGACTCTGGATGCGGAAATCGGTCCAGGTTATCGA
ATAAAGTGTTTGGAGCCTCAGGACAGCTATATGAGCTGCCACGACTCCGAAGAGAATGCCATCGCACGCGTCGGTATCAA
GTATGAGCTTAAGGTAAGCGACAACACCACCTTCAAGGAAGATCTTTCCACAGAGGTTGGTGGTGATGGAGCGGATACCC
GGGCGGAAACCTCTCTGACCACGGCAATCAACTCCCGTTTCGCGTTACGTCTACGCCATCTGCTTGAGAGCGACTCTTCG
GCACCTGCGGGAACCAATGAAACGGACCATACCTTTTCTGTAGGCGTGGTTTACTCACTTCTGTAG

Upstream 100 bases:

>100_bases
ACCACAGAAGCGGCGAAACTTCGCTTTGACGAAGCAGGGATTGGCATTCCGTTCCCACAGATGGACGTACATCTAGACAA
AAATGACTAAGGAGTTATTC

Downstream 100 bases:

>100_bases
CACCGTTCTAAGCGTTAGAAAAACGCCAACTCCGGTTGTTTTTTGCTCGCCACGGATTAAAAAGAAATGAGTAGGGCGGC
GGTACAATGTTGATTGCGAT

Product: salt-induced outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MRSKTIAAMLLTAGLPAVSVAAQDAAADKGSEVSKWSGDIGVGLLFKRGNTNSDSTNANVNMARDSEKWRHTFKADANNE
KEEDPDTEEYNRTDENYFASYKLDRKLGEDAKNYLFNVLTYQKDNFSGYHYEASYAIGVGRRWVDSDRQTLDAEIGPGYR
IKCLEPQDSYMSCHDSEENAIARVGIKYELKVSDNTTFKEDLSTEVGGDGADTRAETSLTTAINSRFALRLRHLLESDSS
APAGTNETDHTFSVGVVYSLL

Sequences:

>Translated_261_residues
MRSKTIAAMLLTAGLPAVSVAAQDAAADKGSEVSKWSGDIGVGLLFKRGNTNSDSTNANVNMARDSEKWRHTFKADANNE
KEEDPDTEEYNRTDENYFASYKLDRKLGEDAKNYLFNVLTYQKDNFSGYHYEASYAIGVGRRWVDSDRQTLDAEIGPGYR
IKCLEPQDSYMSCHDSEENAIARVGIKYELKVSDNTTFKEDLSTEVGGDGADTRAETSLTTAINSRFALRLRHLLESDSS
APAGTNETDHTFSVGVVYSLL
>Mature_261_residues
MRSKTIAAMLLTAGLPAVSVAAQDAAADKGSEVSKWSGDIGVGLLFKRGNTNSDSTNANVNMARDSEKWRHTFKADANNE
KEEDPDTEEYNRTDENYFASYKLDRKLGEDAKNYLFNVLTYQKDNFSGYHYEASYAIGVGRRWVDSDRQTLDAEIGPGYR
IKCLEPQDSYMSCHDSEENAIARVGIKYELKVSDNTTFKEDLSTEVGGDGADTRAETSLTTAINSRFALRLRHLLESDSS
APAGTNETDHTFSVGVVYSLL

Specific function: Unknown

COG id: COG3137

COG function: function code M; Putative salt-induced outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788016, Length=264, Percent_Identity=25, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007433 [H]

Pfam domain/function: PF04338 DUF481 [H]

EC number: NA

Molecular weight: Translated: 28890; Mature: 28890

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSKTIAAMLLTAGLPAVSVAAQDAAADKGSEVSKWSGDIGVGLLFKRGNTNSDSTNANV
CCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHCCCCCCEEEEEECCCCCCCCCCCEE
NMARDSEKWRHTFKADANNEKEEDPDTEEYNRTDENYFASYKLDRKLGEDAKNYLFNVLT
EECCCCHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCEEEEEEEHHHHCHHHHHHHHHHHE
YQKDNFSGYHYEASYAIGVGRRWVDSDRQTLDAEIGPGYRIKCLEPQDSYMSCHDSEENA
EECCCCCCEEEEEEEEEECCCHHHCCCHHEECCCCCCCEEEEEECCCCCHHCCCCCCCCE
IARVGIKYELKVSDNTTFKEDLSTEVGGDGADTRAETSLTTAINSRFALRLRHLLESDSS
EEEEEEEEEEEECCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
APAGTNETDHTFSVGVVYSLL
CCCCCCCCCCEEEHHHHEECC
>Mature Secondary Structure
MRSKTIAAMLLTAGLPAVSVAAQDAAADKGSEVSKWSGDIGVGLLFKRGNTNSDSTNANV
CCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHCCCCCCEEEEEECCCCCCCCCCCEE
NMARDSEKWRHTFKADANNEKEEDPDTEEYNRTDENYFASYKLDRKLGEDAKNYLFNVLT
EECCCCHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCEEEEEEEHHHHCHHHHHHHHHHHE
YQKDNFSGYHYEASYAIGVGRRWVDSDRQTLDAEIGPGYRIKCLEPQDSYMSCHDSEENA
EECCCCCCEEEEEEEEEECCCHHHCCCHHEECCCCCCCEEEEEECCCCCHHCCCCCCCCE
IARVGIKYELKVSDNTTFKEDLSTEVGGDGADTRAETSLTTAINSRFALRLRHLLESDSS
EEEEEEEEEEEECCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
APAGTNETDHTFSVGVVYSLL
CCCCCCCCCCEEEHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]