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The map label for this gene is clpS [H]

Identifier: 110834145

GI number: 110834145

Start: 1458367

End: 1458741

Strand: Direct

Name: clpS [H]

Synonym: ABO_1284

Alternate gene names: 110834145

Gene position: 1458367-1458741 (Clockwise)

Preceding gene: 110834143

Following gene: 110834146

Centisome position: 46.74

GC content: 54.13

Gene sequence:

>375_bases
ATGAATTGGCATCCGGTAATGATTGACGAAACAGGCTCGCTGCGTGGCGGGCCGGCAGATTCCTCCTCAGACCCGGATCG
GCACGGTGACCTTGCCGTCGAGGAGGCTAAGCCAAAGCTAAAGCCACCGTCCATGTACAAGGTGTTGATGCTCAATGATG
ACTACACGCCAATGGATTTTGTGGTAGAGATACTAGAAGACTTCTTCAATTTGGACCGTGAGCAGGCCACCCGTGTCATG
CTCACGGTTCACACTGAAGGAAAAGCGGTGTGCGGGGTTTACCCGCAAGACATCGCCGAAACAAAAGCCACGCAAGTGGT
GGAATACGCCCGGGAGAATCAGCATCCGTTGATGTGTCAGGTGGAACAGGCCTGA

Upstream 100 bases:

>100_bases
GGTAAATTGATTTACCTCAGGGGATTGAAAAAACACCGACCACCCATCATTTCTTCATTGCCTGCTGACGCCAGCAGGGT
TACAACCGTTTTGAGGCTTT

Downstream 100 bases:

>100_bases
CACTCTCCTTGCGGGCCCTGCAGTGAGGTAGCCTTATGCTCAGCAAAGAACTGGAAATGACGCTTAACGAGGCGTTTCGT
CACGCACGTGGCCATCGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MNWHPVMIDETGSLRGGPADSSSDPDRHGDLAVEEAKPKLKPPSMYKVLMLNDDYTPMDFVVEILEDFFNLDREQATRVM
LTVHTEGKAVCGVYPQDIAETKATQVVEYARENQHPLMCQVEQA

Sequences:

>Translated_124_residues
MNWHPVMIDETGSLRGGPADSSSDPDRHGDLAVEEAKPKLKPPSMYKVLMLNDDYTPMDFVVEILEDFFNLDREQATRVM
LTVHTEGKAVCGVYPQDIAETKATQVVEYARENQHPLMCQVEQA
>Mature_124_residues
MNWHPVMIDETGSLRGGPADSSSDPDRHGDLAVEEAKPKLKPPSMYKVLMLNDDYTPMDFVVEILEDFFNLDREQATRVM
LTVHTEGKAVCGVYPQDIAETKATQVVEYARENQHPLMCQVEQA

Specific function: Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation [H]

COG id: COG2127

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpS family [H]

Homologues:

Organism=Escherichia coli, GI1787108, Length=94, Percent_Identity=57.4468085106383, Blast_Score=127, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022935
- InterPro:   IPR003769
- InterPro:   IPR014719 [H]

Pfam domain/function: PF02617 ClpS [H]

EC number: NA

Molecular weight: Translated: 13980; Mature: 13980

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWHPVMIDETGSLRGGPADSSSDPDRHGDLAVEEAKPKLKPPSMYKVLMLNDDYTPMDF
CCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEECCCCCCHHH
VVEILEDFFNLDREQATRVMLTVHTEGKAVCGVYPQDIAETKATQVVEYARENQHPLMCQ
HHHHHHHHHCCCHHHCEEEEEEEECCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEE
VEQA
EECC
>Mature Secondary Structure
MNWHPVMIDETGSLRGGPADSSSDPDRHGDLAVEEAKPKLKPPSMYKVLMLNDDYTPMDF
CCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEECCCCCCHHH
VVEILEDFFNLDREQATRVMLTVHTEGKAVCGVYPQDIAETKATQVVEYARENQHPLMCQ
HHHHHHHHHCCCHHHCEEEEEEEECCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEE
VEQA
EECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA