| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is bolA [H]
Identifier: 110834113
GI number: 110834113
Start: 1427797
End: 1428156
Strand: Direct
Name: bolA [H]
Synonym: ABO_1252
Alternate gene names: 110834113
Gene position: 1427797-1428156 (Clockwise)
Preceding gene: 110834112
Following gene: 110834114
Centisome position: 45.76
GC content: 56.94
Gene sequence:
>360_bases ATGAGTGTAGCGACATTGATCGAGCGCAAGGTTTTCGAGGCGGTGCCTGTGGCACATTTCGCCCTGGAAAATGAAAGCCA CAAGCACAGCGTGCCGCCAAACTCGGAAACCCACTTCAAGCTGGTGCTGGTGAGCGAGGTGTTTGCCGGCATGATGCCGG TGCGTCGCCATCAGATGCTCTACAAAATTCTTGCTGAAGAGTTGGAGGGGCCTGTGCATGCGCTGGCATTGCACACCCAT ACGCCGGCGGAATGGCAGGCCAAGGGGGGCGAGATTTTGGCGTCACCGGACTGCCTGGGTGGCAGTAAACATGACCCGCA ATTCAGCAAGGGAGAATCAACGTTGGGAGAGAAGTCGTGA
Upstream 100 bases:
>100_bases CCCGTAGGGGGCGTTACGCCTTACGCACAGCTGATATAATCTCCCTATCCGCAGTACTTTCTGCAGTGCTTTTCTGAAAC GGTTCCGGCCGAGGTGGACT
Downstream 100 bases:
>100_bases GTACCCAGCATCGGGTGGAAACCCCACATAGTATTGTGGTGGCGGCGTTGTACAAATTTGTTCGGCTGTCTGGGTTCGAG CAATTGCAACAGCCGCTGCT
Product: bolA protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MSVATLIERKVFEAVPVAHFALENESHKHSVPPNSETHFKLVLVSEVFAGMMPVRRHQMLYKILAEELEGPVHALALHTH TPAEWQAKGGEILASPDCLGGSKHDPQFSKGESTLGEKS
Sequences:
>Translated_119_residues MSVATLIERKVFEAVPVAHFALENESHKHSVPPNSETHFKLVLVSEVFAGMMPVRRHQMLYKILAEELEGPVHALALHTH TPAEWQAKGGEILASPDCLGGSKHDPQFSKGESTLGEKS >Mature_118_residues SVATLIERKVFEAVPVAHFALENESHKHSVPPNSETHFKLVLVSEVFAGMMPVRRHQMLYKILAEELEGPVHALALHTHT PAEWQAKGGEILASPDCLGGSKHDPQFSKGESTLGEKS
Specific function: Plays An Important Role In General Stress Response (Heat Shock, Acidic Stress, Oxidative Stress, Carbon-Starvation Stress And Osmotic Shock). Involved In Morphogenetic Pathway. Has A Role Is The Induction Of The Expression Of Daca (Pbp5), Dacc (Pbp6) And
COG id: COG0271
COG function: function code T; Stress-induced morphogen (activity unknown)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bolA/yrbA family [H]
Homologues:
Organism=Homo sapiens, GI7705638, Length=101, Percent_Identity=47.5247524752475, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI87081740, Length=101, Percent_Identity=45.5445544554455, Blast_Score=92, Evalue=7e-21, Organism=Caenorhabditis elegans, GI17541430, Length=99, Percent_Identity=38.3838383838384, Blast_Score=72, Evalue=7e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002634 [H]
Pfam domain/function: PF01722 BolA [H]
EC number: NA
Molecular weight: Translated: 13061; Mature: 12930
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVATLIERKVFEAVPVAHFALENESHKHSVPPNSETHFKLVLVSEVFAGMMPVRRHQML CCHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHCCHHHHHHH YKILAEELEGPVHALALHTHTPAEWQAKGGEILASPDCLGGSKHDPQFSKGESTLGEKS HHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SVATLIERKVFEAVPVAHFALENESHKHSVPPNSETHFKLVLVSEVFAGMMPVRRHQML CHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHCCHHHHHHH YKILAEELEGPVHALALHTHTPAEWQAKGGEILASPDCLGGSKHDPQFSKGESTLGEKS HHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]