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The map label for this gene is ydiS [C]

Identifier: 110834110

GI number: 110834110

Start: 1423472

End: 1424560

Strand: Direct

Name: ydiS [C]

Synonym: ABO_1249

Alternate gene names: 110834110

Gene position: 1423472-1424560 (Clockwise)

Preceding gene: 110834108

Following gene: 110834112

Centisome position: 45.62

GC content: 61.8

Gene sequence:

>1089_bases
ATGAGCAACTGGGATGTGCTGGTTATCGGCGCCGGCCAGGCGGGCTGCGCGGCAGCATGGGATTTGGCCGCAGCGGGCCT
GCGTGTGGTGGTTATTTCCCGTGCCCAACCCCGTGCTAAGCCCTGTGCGGGCGGGGTTACCGAAAAGACGCTGGCTCGTT
ACCGGTTCAGTATTGCATCGGTGGTTCGCGAAACGGTGTCCACCCTAGCGGTGAGCCATACCTCTTCGCCCATTCGCCAC
CTAAGTGCCCAAGCACGGTTCTGTGTGATGACTGAACGGTCAGAATTGGATGCTCTTTGTCGCGCGAATGCTGAGCAACA
GGGCGCCGTGTTCTGCGACACCGCAGGACTACGATCACTTCATCAGGAGGCTAACGGGGTTTCTGTGCAGACCCGGGAAG
GTCAGCGCTTCACCGCCCCCTGGCTGGTCGCTGCGGATGGTGCCAACAGCGCTGTGGCGCGGATGCTGGGAGAGCGGCAT
CTGCGCGGTGCCATGGCCATCGAGGGGTGCGTACCCCGCAAGAACATACGTGATTACCCTCCCATGACGCTGGATTTTGG
TGCAATTCGCGGCGGCTATGGCTGGCTGTTTCCCAAGGGGGACCATGTGAACGTGGGGCTCTATGTATGGCGCCATGGGG
TGGCAGCGCCGGAGCGTTCCGCTCTGCAGCGTTACAGCCTTGCCCGTTTGGGCGCACAGGCCGAGCAGGTAGCGGGCTAT
CCTCTGGGGACGTGGCTGCCTAACACCCGGTTGGTTAATGGACGGGTGTTGTTTGTGGGCGATGCGGCAGGGTGCACGGA
AGCGTTGCTGGGAGAGGGGATTTACGGCGCGGTACTTAGTGGGCAAATGGCTGCCCAGGCGTTACTGAGCAGTGAGCCGG
AAATAGCCTACCCCGCCTCACTAGCAGGCTGGCGTGAAGAACTACACCAAGTCACTCGGCTTGGGCAGCTGTTCTATGGC
CTATTACCCATTTCTACACGGCTGCTGCAGAGCCGGTTGGGGGCGACACTGGTTGATGGTTTTGCCCAGGGGCTGACCCT
GGGGCAGTGCAAGCGCCAGTGGCGGGGGGCTCAGTTGTCGAAAGGCTGA

Upstream 100 bases:

>100_bases
AACCGAGAGGACCGCTGAGCAAGGTCAATGGGTCAGGGTCCATGACGGCGCGCATTATAAAGGACCCGACGGCTAATCGC
ACGGAATCAGAGGTATATAT

Downstream 100 bases:

>100_bases
TGGCCTTGATGGCTCCGGTATTGCACCGGTGTGATACTGAACCAGCGTTTGAAGGCGCGATTGAAGGCACTTTGCTCGGA
GTAGCCCAGATCTAGCGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 362; Mature: 361

Protein sequence:

>362_residues
MSNWDVLVIGAGQAGCAAAWDLAAAGLRVVVISRAQPRAKPCAGGVTEKTLARYRFSIASVVRETVSTLAVSHTSSPIRH
LSAQARFCVMTERSELDALCRANAEQQGAVFCDTAGLRSLHQEANGVSVQTREGQRFTAPWLVAADGANSAVARMLGERH
LRGAMAIEGCVPRKNIRDYPPMTLDFGAIRGGYGWLFPKGDHVNVGLYVWRHGVAAPERSALQRYSLARLGAQAEQVAGY
PLGTWLPNTRLVNGRVLFVGDAAGCTEALLGEGIYGAVLSGQMAAQALLSSEPEIAYPASLAGWREELHQVTRLGQLFYG
LLPISTRLLQSRLGATLVDGFAQGLTLGQCKRQWRGAQLSKG

Sequences:

>Translated_362_residues
MSNWDVLVIGAGQAGCAAAWDLAAAGLRVVVISRAQPRAKPCAGGVTEKTLARYRFSIASVVRETVSTLAVSHTSSPIRH
LSAQARFCVMTERSELDALCRANAEQQGAVFCDTAGLRSLHQEANGVSVQTREGQRFTAPWLVAADGANSAVARMLGERH
LRGAMAIEGCVPRKNIRDYPPMTLDFGAIRGGYGWLFPKGDHVNVGLYVWRHGVAAPERSALQRYSLARLGAQAEQVAGY
PLGTWLPNTRLVNGRVLFVGDAAGCTEALLGEGIYGAVLSGQMAAQALLSSEPEIAYPASLAGWREELHQVTRLGQLFYG
LLPISTRLLQSRLGATLVDGFAQGLTLGQCKRQWRGAQLSKG
>Mature_361_residues
SNWDVLVIGAGQAGCAAAWDLAAAGLRVVVISRAQPRAKPCAGGVTEKTLARYRFSIASVVRETVSTLAVSHTSSPIRHL
SAQARFCVMTERSELDALCRANAEQQGAVFCDTAGLRSLHQEANGVSVQTREGQRFTAPWLVAADGANSAVARMLGERHL
RGAMAIEGCVPRKNIRDYPPMTLDFGAIRGGYGWLFPKGDHVNVGLYVWRHGVAAPERSALQRYSLARLGAQAEQVAGYP
LGTWLPNTRLVNGRVLFVGDAAGCTEALLGEGIYGAVLSGQMAAQALLSSEPEIAYPASLAGWREELHQVTRLGQLFYGL
LPISTRLLQSRLGATLVDGFAQGLTLGQCKRQWRGAQLSKG

Specific function: Probably Accepts Electrons From Ydiq/Ydir And Reduces A Quinone. [C]

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the geranylgeranyl reductase family. ChlP subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787991, Length=308, Percent_Identity=28.8961038961039, Blast_Score=62, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011777
- InterPro:   IPR002938
- InterPro:   IPR003042 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: 1.5.5.- [C]

Molecular weight: Translated: 38754; Mature: 38623

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNWDVLVIGAGQAGCAAAWDLAAAGLRVVVISRAQPRAKPCAGGVTEKTLARYRFSIAS
CCCCCEEEEECCCCCHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
VVRETVSTLAVSHTSSPIRHLSAQARFCVMTERSELDALCRANAEQQGAVFCDTAGLRSL
HHHHHHHHHHHHCCCCHHHHHHCCCEEEEEECHHHHHHHHHCCCCCCCCEEECHHHHHHH
HQEANGVSVQTREGQRFTAPWLVAADGANSAVARMLGERHLRGAMAIEGCVPRKNIRDYP
HHHCCCCEEEECCCCEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PMTLDFGAIRGGYGWLFPKGDHVNVGLYVWRHGVAAPERSALQRYSLARLGAQAEQVAGY
CCEEECCCEECCCEEECCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHCCC
PLGTWLPNTRLVNGRVLFVGDAAGCTEALLGEGIYGAVLSGQMAAQALLSSEPEIAYPAS
CCCCCCCCCEEECCEEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHH
LAGWREELHQVTRLGQLFYGLLPISTRLLQSRLGATLVDGFAQGLTLGQCKRQWRGAQLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC
KG
CC
>Mature Secondary Structure 
SNWDVLVIGAGQAGCAAAWDLAAAGLRVVVISRAQPRAKPCAGGVTEKTLARYRFSIAS
CCCCEEEEECCCCCHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
VVRETVSTLAVSHTSSPIRHLSAQARFCVMTERSELDALCRANAEQQGAVFCDTAGLRSL
HHHHHHHHHHHHCCCCHHHHHHCCCEEEEEECHHHHHHHHHCCCCCCCCEEECHHHHHHH
HQEANGVSVQTREGQRFTAPWLVAADGANSAVARMLGERHLRGAMAIEGCVPRKNIRDYP
HHHCCCCEEEECCCCEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PMTLDFGAIRGGYGWLFPKGDHVNVGLYVWRHGVAAPERSALQRYSLARLGAQAEQVAGY
CCEEECCCEECCCEEECCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHCCC
PLGTWLPNTRLVNGRVLFVGDAAGCTEALLGEGIYGAVLSGQMAAQALLSSEPEIAYPAS
CCCCCCCCCEEECCEEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCHH
LAGWREELHQVTRLGQLFYGLLPISTRLLQSRLGATLVDGFAQGLTLGQCKRQWRGAQLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC
KG
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9063468 [H]