| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is adhA [H]
Identifier: 110834092
GI number: 110834092
Start: 1402134
End: 1403126
Strand: Direct
Name: adhA [H]
Synonym: ABO_1231
Alternate gene names: 110834092
Gene position: 1402134-1403126 (Clockwise)
Preceding gene: 110834091
Following gene: 110834093
Centisome position: 44.94
GC content: 55.39
Gene sequence:
>993_bases ATGACATTTAAGGCATTACAGACCCGCGAAACCGAGGCCGGTTACAGTAACGTGCTGGTTGACCGCGAGCTAAGTGAGCT GGGCGAAGGCGGTGTATTGGTACGGGTGCAATGGTCGTCTCTGAATTACAAGGATGCACTGTCAGCCACCGGCAACAAAG GCGTTACCCGCCAATTCCCTCATACCCCAGGCATTGATGCGGTTGGCGTGGTTGAAGAGGCGAGTGATGGGCCTTTTAGT GCGGGCGATGCGGTGATTTGCACAGGCTATGATCTGGGGATGAACACGGATGGCGGTTATGCAGAATATATCCGCGTACC GGCTGAGTGGCTAGTGCCGCTACCAGAAGGCCTTGCGCCTCGCGATGCAATGTTGCTTGGTACGGCAGGGCTAACCGCAG CCTTGAGTGTTGAATCGTTGCTGGATACGGGCGTTAACCCGGATCAGGGGCCCGTGCTGGTGACTGGCGCGACTGGTGGC GTGGGCAGCATTAGTGTTGCGATACTGGCTAAGTTAGGTTTTGAGGTGGTGGCCGTTAGTGGCAAAGCAGACGCCCACGA ATGGCTCACTGAGCTTGGTGCATCACGCATCATTGATCGCAATGATTTTCTGGAAAGTGCCGCCAAGCCCATGGCCAAAG AGCAGTGGTCGGGCGCTGTGGATTGCGTGGGGGGTGAAATGCTGGCCGCTGCTCTGAAGGGTCTAAAGTACGGAGGTAGT GCCACTTGCTGTGGGTTAGCCGGTTCTCCCAAGCTTGAGATGACGGTTTTTCCATTCATTTTGCGCGGAGTAAATCTGTT AGGGGTAGATAGCGTTGAATTACCCTGTGAAATTAAGCAGCAAATGTGGCAGTTACTGGCGGATGAATGGATGCCGAAAG ACCTTTCACTGCTGGAAGCGGCGCAAACGGAGCTTTCTGGGGTGACCGATTGGGTGGATCGCATTCTGGCTGGAGGAGTT CGCGGGCGGGTCGTGGTTAAGCTGCCTGAGTAA
Upstream 100 bases:
>100_bases TAGAAGCAATGGCACATCGGGTGTTGGAAAAGTTTTGGCATCGTGGCAGCCAACGTCAGATTCATTAGTACCTTTACCGA ACACTGCAAAGGAGTAGCTC
Downstream 100 bases:
>100_bases TAGCTACAGGGTTTTGAGAGCAGCGCATACAGCACATTGTTTTCTCATCGTCGACAATCATTGTCCTCGTATTCCCTCGA TGCCCGCTTGATCAAGCGGG
Product: alcohol dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 330; Mature: 329
Protein sequence:
>330_residues MTFKALQTRETEAGYSNVLVDRELSELGEGGVLVRVQWSSLNYKDALSATGNKGVTRQFPHTPGIDAVGVVEEASDGPFS AGDAVICTGYDLGMNTDGGYAEYIRVPAEWLVPLPEGLAPRDAMLLGTAGLTAALSVESLLDTGVNPDQGPVLVTGATGG VGSISVAILAKLGFEVVAVSGKADAHEWLTELGASRIIDRNDFLESAAKPMAKEQWSGAVDCVGGEMLAAALKGLKYGGS ATCCGLAGSPKLEMTVFPFILRGVNLLGVDSVELPCEIKQQMWQLLADEWMPKDLSLLEAAQTELSGVTDWVDRILAGGV RGRVVVKLPE
Sequences:
>Translated_330_residues MTFKALQTRETEAGYSNVLVDRELSELGEGGVLVRVQWSSLNYKDALSATGNKGVTRQFPHTPGIDAVGVVEEASDGPFS AGDAVICTGYDLGMNTDGGYAEYIRVPAEWLVPLPEGLAPRDAMLLGTAGLTAALSVESLLDTGVNPDQGPVLVTGATGG VGSISVAILAKLGFEVVAVSGKADAHEWLTELGASRIIDRNDFLESAAKPMAKEQWSGAVDCVGGEMLAAALKGLKYGGS ATCCGLAGSPKLEMTVFPFILRGVNLLGVDSVELPCEIKQQMWQLLADEWMPKDLSLLEAAQTELSGVTDWVDRILAGGV RGRVVVKLPE >Mature_329_residues TFKALQTRETEAGYSNVLVDRELSELGEGGVLVRVQWSSLNYKDALSATGNKGVTRQFPHTPGIDAVGVVEEASDGPFSA GDAVICTGYDLGMNTDGGYAEYIRVPAEWLVPLPEGLAPRDAMLLGTAGLTAALSVESLLDTGVNPDQGPVLVTGATGGV GSISVAILAKLGFEVVAVSGKADAHEWLTELGASRIIDRNDFLESAAKPMAKEQWSGAVDCVGGEMLAAALKGLKYGGSA TCCGLAGSPKLEMTVFPFILRGVNLLGVDSVELPCEIKQQMWQLLADEWMPKDLSLLEAAQTELSGVTDWVDRILAGGVR GRVVVKLPE
Specific function: Unknown
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]
Homologues:
Organism=Homo sapiens, GI194239674, Length=305, Percent_Identity=22.9508196721311, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI13236495, Length=305, Percent_Identity=22.9508196721311, Blast_Score=67, Evalue=3e-11, Organism=Escherichia coli, GI1789651, Length=305, Percent_Identity=49.1803278688525, Blast_Score=279, Evalue=2e-76,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR011032 - InterPro: IPR016040 - InterPro: IPR014188 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: NA
Molecular weight: Translated: 34666; Mature: 34535
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFKALQTRETEAGYSNVLVDRELSELGEGGVLVRVQWSSLNYKDALSATGNKGVTRQFP CCCCCCCCCCCCCCCHHEEECCHHHHHCCCCEEEEEEECCCCHHHHHCCCCCCCCCCCCC HTPGIDAVGVVEEASDGPFSAGDAVICTGYDLGMNTDGGYAEYIRVPAEWLVPLPEGLAP CCCCCCCEEEEECCCCCCCCCCCEEEEECEECCCCCCCCHHHEEECCHHHCCCCCCCCCC RDAMLLGTAGLTAALSVESLLDTGVNPDQGPVLVTGATGGVGSISVAILAKLGFEVVAVS CCEEEEECCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCEEEEEEC GKADAHEWLTELGASRIIDRNDFLESAAKPMAKEQWSGAVDCVGGEMLAAALKGLKYGGS CCCHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHCCCCEECCCHHHHHHHHHHCCCCCC ATCCGLAGSPKLEMTVFPFILRGVNLLGVDSVELPCEIKQQMWQLLADEWMPKDLSLLEA CEEECCCCCCCEEEEHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHH AQTELSGVTDWVDRILAGGVRGRVVVKLPE HHHHHHHHHHHHHHHHHCCCCCEEEEECCC >Mature Secondary Structure TFKALQTRETEAGYSNVLVDRELSELGEGGVLVRVQWSSLNYKDALSATGNKGVTRQFP CCCCCCCCCCCCCCHHEEECCHHHHHCCCCEEEEEEECCCCHHHHHCCCCCCCCCCCCC HTPGIDAVGVVEEASDGPFSAGDAVICTGYDLGMNTDGGYAEYIRVPAEWLVPLPEGLAP CCCCCCCEEEEECCCCCCCCCCCEEEEECEECCCCCCCCHHHEEECCHHHCCCCCCCCCC RDAMLLGTAGLTAALSVESLLDTGVNPDQGPVLVTGATGGVGSISVAILAKLGFEVVAVS CCEEEEECCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCEEEEEEC GKADAHEWLTELGASRIIDRNDFLESAAKPMAKEQWSGAVDCVGGEMLAAALKGLKYGGS CCCHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHCCCCEECCCHHHHHHHHHHCCCCCC ATCCGLAGSPKLEMTVFPFILRGVNLLGVDSVELPCEIKQQMWQLLADEWMPKDLSLLEA CEEECCCCCCCEEEEHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHH AQTELSGVTDWVDRILAGGVRGRVVVKLPE HHHHHHHHHHHHHHHHHCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1370469; 9278503 [H]