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The map label for this gene is ybhB [H]

Identifier: 110834061

GI number: 110834061

Start: 1362238

End: 1362870

Strand: Direct

Name: ybhB [H]

Synonym: ABO_1200

Alternate gene names: 110834061

Gene position: 1362238-1362870 (Clockwise)

Preceding gene: 110834060

Following gene: 110834064

Centisome position: 43.66

GC content: 51.82

Gene sequence:

>633_bases
ATGCAGTTACTCAGCAACAGCCTCACCGATCAGGCGCCGATTCTGGAAAAATTTGCCTTTGCGACGATAAACCCGGACAC
CCATGTATCCTTAGCCAGTAATATTAACCCGCATTTAGCTTGGAAAGGTGCTCCTGAAGGGACGCGTTCCTTTGCCATTG
TGTGCGTGGACCCGGATGCGCCTAGTGCAGCAGATGATGTGAACAGGGATGACAGAGAGGTTCCGGCTGACTTGCCACGG
GTGGATTTTTATCACTGGACTCTGTTCAACATTCCTGCTGAACAGAGTGAAATTCGTGAGGGTAGCCACTGTAATAAAGT
GACTCCGAAAGGTAAACCTGGGCCCGCTGCGCCAGATGGTCAGCGCCATGGGCTAAATGATTACACGGGTTGGTTTGCAG
GTGATGCTGATATGGAAGGGCAATACTTTGGTTACGACGGCCCGTGCCCACCCTGGAATGACAGCATCGTCCACCGTTAT
GTTTTTACCGTTTATGCACTGGATGTGCCGGCGTTGCCTGAAGAGAAAGACCTGAGTGGTGCAGCGCTGGCTGAGCAGAT
TAAGTCTCACTCCTTGGATCAAGCGAGCCTTACGGTAAGTTACACACTGAACCCACGCTTAGCGCAGGGATAA

Upstream 100 bases:

>100_bases
TGGCTGCAGATGAGGCGCTTGGCTCCAGCAACTTGAAATAGCGGTTATTGCCCGCATGGCTGATACCGTAGGCATGTAGT
GCAACAAGGAGAGATTATCC

Downstream 100 bases:

>100_bases
ACATTTTTGCAGGATTTCAGAGTCTAGTCCTGAAATAGGTTGTCACCTATTTCGGCTCAACACGCCCGCTGTACTGCATC
GGGCGTGCTGTATTTCAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MQLLSNSLTDQAPILEKFAFATINPDTHVSLASNINPHLAWKGAPEGTRSFAIVCVDPDAPSAADDVNRDDREVPADLPR
VDFYHWTLFNIPAEQSEIREGSHCNKVTPKGKPGPAAPDGQRHGLNDYTGWFAGDADMEGQYFGYDGPCPPWNDSIVHRY
VFTVYALDVPALPEEKDLSGAALAEQIKSHSLDQASLTVSYTLNPRLAQG

Sequences:

>Translated_210_residues
MQLLSNSLTDQAPILEKFAFATINPDTHVSLASNINPHLAWKGAPEGTRSFAIVCVDPDAPSAADDVNRDDREVPADLPR
VDFYHWTLFNIPAEQSEIREGSHCNKVTPKGKPGPAAPDGQRHGLNDYTGWFAGDADMEGQYFGYDGPCPPWNDSIVHRY
VFTVYALDVPALPEEKDLSGAALAEQIKSHSLDQASLTVSYTLNPRLAQG
>Mature_210_residues
MQLLSNSLTDQAPILEKFAFATINPDTHVSLASNINPHLAWKGAPEGTRSFAIVCVDPDAPSAADDVNRDDREVPADLPR
VDFYHWTLFNIPAEQSEIREGSHCNKVTPKGKPGPAAPDGQRHGLNDYTGWFAGDADMEGQYFGYDGPCPPWNDSIVHRY
VFTVYALDVPALPEEKDLSGAALAEQIKSHSLDQASLTVSYTLNPRLAQG

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786990, Length=202, Percent_Identity=30.6930693069307, Blast_Score=97, Evalue=8e-22,
Organism=Escherichia coli, GI1786757, Length=204, Percent_Identity=26.9607843137255, Blast_Score=81, Evalue=6e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 22932; Mature: 22932

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLLSNSLTDQAPILEKFAFATINPDTHVSLASNINPHLAWKGAPEGTRSFAIVCVDPDA
CCCCHHHCCCCHHHHHHHEEEEECCCCEEEEECCCCCEEEECCCCCCCCEEEEEEECCCC
PSAADDVNRDDREVPADLPRVDFYHWTLFNIPAEQSEIREGSHCNKVTPKGKPGPAAPDG
CCCCHHCCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCC
QRHGLNDYTGWFAGDADMEGQYFGYDGPCPPWNDSIVHRYVFTVYALDVPALPEEKDLSG
CCCCCCCCCCEECCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHEECCCCCCCCCCCCH
AALAEQIKSHSLDQASLTVSYTLNPRLAQG
HHHHHHHHHCCCCCCEEEEEEEECCCCCCC
>Mature Secondary Structure
MQLLSNSLTDQAPILEKFAFATINPDTHVSLASNINPHLAWKGAPEGTRSFAIVCVDPDA
CCCCHHHCCCCHHHHHHHEEEEECCCCEEEEECCCCCEEEECCCCCCCCEEEEEEECCCC
PSAADDVNRDDREVPADLPRVDFYHWTLFNIPAEQSEIREGSHCNKVTPKGKPGPAAPDG
CCCCHHCCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCC
QRHGLNDYTGWFAGDADMEGQYFGYDGPCPPWNDSIVHRYVFTVYALDVPALPEEKDLSG
CCCCCCCCCCEECCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHEECCCCCCCCCCCCH
AALAEQIKSHSLDQASLTVSYTLNPRLAQG
HHHHHHHHHCCCCCCEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3058702; 9278503; 11439028 [H]