| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
Click here to switch to the map view.
The map label for this gene is yeaZ [H]
Identifier: 110833989
GI number: 110833989
Start: 1280873
End: 1281547
Strand: Direct
Name: yeaZ [H]
Synonym: ABO_1128
Alternate gene names: 110833989
Gene position: 1280873-1281547 (Clockwise)
Preceding gene: 110833988
Following gene: 110833990
Centisome position: 41.05
GC content: 58.81
Gene sequence:
>675_bases ATGACGCGACTACTTGCATTAGAAACCGCAGGAGAAACCTGCTCGGTGGCGCTGTTGGATAATGGCAGTGTAATCGAACG CTTTGAGCAAGCGCCTCGTCAGCAGACCGAGCGGGTATTGCCCATGGTTGAGGGGGTGCTGGCGGAGGCGGGTTTCCGGC TTGCCGATCTTGATGGCATTGCTTTCGGGCATGGTCCGGGTGCATTCACCGGTGTGCGGGTTGCGGCTGCTGTAACCCAG GGTTTGGCCTTCGCGGCGGATCTACCGGTGGTAGGGGTTTCCACTTTAGCGGCTTGTGCGCTGAGCGCGCAGGCACTGAA GGTGAATCCGCATGTTATTGCTTGTTTTGATGCGCGCATGGGCGAGCTTTACCTCGGCGCCTATGAGTGTGAGCCGGGCT CGGCTAATGCCGTGCTTTGTGATGGGCTGTTCAAGCCTGATGCTTTGCCAGAACTGCCGTGCGCTGAATGGATGATCGTT GGTTCCGGGTTGGTGTATCAAGACGCGCTGCGGGCGGCCTATGGCGCAAGCTTCTGCGTTGCTGACGCTCACCCCCGTGC GCAAGCTGTTGCGCAGCTGGCATTACCTGCATTCGAACGCGGAGAGGGTGTGAGTGCAGAACAGGCACAGCCGGTCTATC TGCGAGATCAAGTGATTCAGGGAGCAGTACGATGA
Upstream 100 bases:
>100_bases ACAGCCTGCCCAACATGACCCGTACCCGTAAGTTAGATGTGGTTCAGCGGTTTTTTGATTATCTGGCCGCTCAGGGCCAG GAAGCGGGAAAAATGGAATC
Downstream 100 bases:
>100_bases TCAACTGGGATCTTCCCAATGTGCATGAACTGACAGTGACCGTGCCTGCCGAAGCCATCGATGTGATGGGCCATGTGAAC AACACTGAATATCTGCGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MTRLLALETAGETCSVALLDNGSVIERFEQAPRQQTERVLPMVEGVLAEAGFRLADLDGIAFGHGPGAFTGVRVAAAVTQ GLAFAADLPVVGVSTLAACALSAQALKVNPHVIACFDARMGELYLGAYECEPGSANAVLCDGLFKPDALPELPCAEWMIV GSGLVYQDALRAAYGASFCVADAHPRAQAVAQLALPAFERGEGVSAEQAQPVYLRDQVIQGAVR
Sequences:
>Translated_224_residues MTRLLALETAGETCSVALLDNGSVIERFEQAPRQQTERVLPMVEGVLAEAGFRLADLDGIAFGHGPGAFTGVRVAAAVTQ GLAFAADLPVVGVSTLAACALSAQALKVNPHVIACFDARMGELYLGAYECEPGSANAVLCDGLFKPDALPELPCAEWMIV GSGLVYQDALRAAYGASFCVADAHPRAQAVAQLALPAFERGEGVSAEQAQPVYLRDQVIQGAVR >Mature_223_residues TRLLALETAGETCSVALLDNGSVIERFEQAPRQQTERVLPMVEGVLAEAGFRLADLDGIAFGHGPGAFTGVRVAAAVTQG LAFAADLPVVGVSTLAACALSAQALKVNPHVIACFDARMGELYLGAYECEPGSANAVLCDGLFKPDALPELPCAEWMIVG SGLVYQDALRAAYGASFCVADAHPRAQAVAQLALPAFERGEGVSAEQAQPVYLRDQVIQGAVR
Specific function: Unknown
COG id: COG1214
COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M22 family [H]
Homologues:
Organism=Escherichia coli, GI1788109, Length=223, Percent_Identity=39.0134529147982, Blast_Score=157, Evalue=8e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022496 - InterPro: IPR000905 [H]
Pfam domain/function: PF00814 Peptidase_M22 [H]
EC number: NA
Molecular weight: Translated: 23359; Mature: 23228
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRLLALETAGETCSVALLDNGSVIERFEQAPRQQTERVLPMVEGVLAEAGFRLADLDGI CCEEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCE AFGHGPGAFTGVRVAAAVTQGLAFAADLPVVGVSTLAACALSAQALKVNPHVIACFDARM EECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEECCCEEEEECCCC GELYLGAYECEPGSANAVLCDGLFKPDALPELPCAEWMIVGSGLVYQDALRAAYGASFCV CCEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCEEEE ADAHPRAQAVAQLALPAFERGEGVSAEQAQPVYLRDQVIQGAVR ECCCHHHHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure TRLLALETAGETCSVALLDNGSVIERFEQAPRQQTERVLPMVEGVLAEAGFRLADLDGI CEEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCE AFGHGPGAFTGVRVAAAVTQGLAFAADLPVVGVSTLAACALSAQALKVNPHVIACFDARM EECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEECCCEEEEECCCC GELYLGAYECEPGSANAVLCDGLFKPDALPELPCAEWMIVGSGLVYQDALRAAYGASFCV CCEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCEEEE ADAHPRAQAVAQLALPAFERGEGVSAEQAQPVYLRDQVIQGAVR ECCCHHHHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]