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The map label for this gene is yoaA [C]

Identifier: 110833988

GI number: 110833988

Start: 1278870

End: 1280876

Strand: Direct

Name: yoaA [C]

Synonym: ABO_1127

Alternate gene names: 110833988

Gene position: 1278870-1280876 (Clockwise)

Preceding gene: 110833986

Following gene: 110833989

Centisome position: 40.99

GC content: 57.05

Gene sequence:

>2007_bases
ATGTTAACAGCTTGTATTTTGCCCGCCCCGAGTGCAGACACGTTTCAGGGAAATTATGTGACTACCGCCCGTAATCATCT
TACCGATTTAGTGCGCTTTGCGCCGCTTCTGCCTGGGTATCAGCCCCGTGAACCGCAACTAGAAATGGCGGATGCGGTGG
AAGACGTGATTGGCAGTGGTGCCACGCTGTTAGTAGAAGCGGAAACGGGCACCGGTAAAACGCTAGCTTACCTAGTGCCT
GCACTGCTATCGGAAGGCCCGACGTTGGTGTCCACTGGCACCAAAAGCTTGCAGGATCAGCTGTTCTTTAAAGACCTGCC
CATGGTCAAGAAGGCACTGAACTTGCCGCGTAAAGTGGCGCTGCTAAAAGGGCGCGCTAACTACCTATGTCCGTATCGAT
TGGAGCTGCATCAAGAAGACGCCCGTTTTCTCACCCGTGAGACCGTCGGGCAGATGCAGATTGTGTCGCACTGGGCAGCG
CGCACTCGCACTGGTGATATCGCTGAGCTGCAACAGATTCCGGAAGATGCGCCAGTATGGCCCTGGGTAACCAGCACCGC
GGACAATTGCCTGGGAACGGAATGCCCCCGCTATAACGAATGCCCGTTGATGAAGGCACGTAAAGAGGCTCAAGAAGCAG
ACTTAGTGGTGGTTAACCACCACCTGTTTTTCGCCGATGCAGCGTTACGCGGCAATGGTGCCGCCTCGGAGTTGCTGCCC
ACCGCCAATACGGTGATTTTCGATGAAGCCCATCAGCTACCCGAAATCGCGGCGGCGTTTTTCGCCGACACATTGAGCAC
CAGACAGATTCAGGAATTGGGCCGCGATAGCCTGTCTGAAGCGGGCCATACCGCCGCGGATCTGGCGGAGCTAAATCGCC
TAGTGGCCGCCGTAGATAAAAGCAGCATGGATTTGCGTTTAAGTCTGGGGGACGGCGAGCGCCGTGAGCCCTGGACGGAA
GTGGCAGAGAATAAGGCGGTGATTGAGGCCGGAGAGGCACTGTTGCAGGCTTTGCAGGAGCTGGATGCATTTCTCGGACC
GCTGGCCAAGGCGAGCCGGGGGATGGATGCCTGCTCTCGGCGCGCCAGTGAACAGGTGGATTGCCTGGCCGCCTACCTGA
AAGGCGGGCAGCCGAATCGAGTGTACTGGTTTGAAACCTTCAAACGCTCTGTGGTCTTGCACAGCACGCCGTTGTCCGTG
GCGGCCCAGCTGCGAGCCCAGCGTGAGCGCAACCCGTGTAGCTGGATTCTCACCTCAGCCACGCTGTCGGTGGGCGGACG
CTTTGAACATATCCAGCACCGTTTGGGGCTGGATTCTGCCCGTACCCTTAGGTTGGAGAGCCCTTTCGATTTTAAGCGCC
AGGCCGTGTTCTATGCCCCGGAAGGGCTGCCGGCGCCGAATGATAGCGAGTACACGGCGCAACTCACCGCTGCCATGGTA
CCGGTCATTAATGCAGCCAGGGGCCGCACTTTTTTCCTGTTTACGAGTCACAGAGCGTTACGTGAAGCCGCGGCTATCCT
TCGCCAGAAGCTTGATTACCCTTTGTTGGTGCAGGGTGAGGCCGGGCGGCGTGAATTACTTGATGCGTTTAGGGAAAAGG
GCAATGCCGTGTTGTTGGGAACCAGCAGCTTCTGGGAAGGCATTGATGTACGTGGTGAAGCGCTCAGTTGTGTGATTATC
GATAAACTGCCATTTGGTTCACCCGGTGATCCGGTGGCGGCGGCGCGCATCGAGCATATTAACCGCAATGGCGGTAATGC
ATTTCGTGATTACCAGCTTCCCCAAGCGGTGCTGGCCCTGCGCCAGGGAGCCGGGCGGCTGATTCGTGACCCGAAAGATA
CCGGGTTGCTGGTAGTTGCAGACCCGCGTTTGCTGACGCGTAGTTATGGCAAGTTGTTCGTTAACAGCCTGCCCAACATG
ACCCGTACCCGTAAGTTAGATGTGGTTCAGCGGTTTTTTGATTATCTGGCCGCTCAGGGCCAGGAAGCGGGAAAAATGGA
ATCATGA

Upstream 100 bases:

>100_bases
CCAGAATGATTAAGGTATAGTCGACCATATTGCCTTCTCGTCGTGCTCTCGCGTTGGGTTCTAGGGGCGAATCGGCTATG
CTCTGCGCGCGCGTTGGGCG

Downstream 100 bases:

>100_bases
CGCGACTACTTGCATTAGAAACCGCAGGAGAAACCTGCTCGGTGGCGCTGTTGGATAATGGCAGTGTAATCGAACGCTTT
GAGCAAGCGCCTCGTCAGCA

Product: ATP-dependent helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 668; Mature: 668

Protein sequence:

>668_residues
MLTACILPAPSADTFQGNYVTTARNHLTDLVRFAPLLPGYQPREPQLEMADAVEDVIGSGATLLVEAETGTGKTLAYLVP
ALLSEGPTLVSTGTKSLQDQLFFKDLPMVKKALNLPRKVALLKGRANYLCPYRLELHQEDARFLTRETVGQMQIVSHWAA
RTRTGDIAELQQIPEDAPVWPWVTSTADNCLGTECPRYNECPLMKARKEAQEADLVVVNHHLFFADAALRGNGAASELLP
TANTVIFDEAHQLPEIAAAFFADTLSTRQIQELGRDSLSEAGHTAADLAELNRLVAAVDKSSMDLRLSLGDGERREPWTE
VAENKAVIEAGEALLQALQELDAFLGPLAKASRGMDACSRRASEQVDCLAAYLKGGQPNRVYWFETFKRSVVLHSTPLSV
AAQLRAQRERNPCSWILTSATLSVGGRFEHIQHRLGLDSARTLRLESPFDFKRQAVFYAPEGLPAPNDSEYTAQLTAAMV
PVINAARGRTFFLFTSHRALREAAAILRQKLDYPLLVQGEAGRRELLDAFREKGNAVLLGTSSFWEGIDVRGEALSCVII
DKLPFGSPGDPVAAARIEHINRNGGNAFRDYQLPQAVLALRQGAGRLIRDPKDTGLLVVADPRLLTRSYGKLFVNSLPNM
TRTRKLDVVQRFFDYLAAQGQEAGKMES

Sequences:

>Translated_668_residues
MLTACILPAPSADTFQGNYVTTARNHLTDLVRFAPLLPGYQPREPQLEMADAVEDVIGSGATLLVEAETGTGKTLAYLVP
ALLSEGPTLVSTGTKSLQDQLFFKDLPMVKKALNLPRKVALLKGRANYLCPYRLELHQEDARFLTRETVGQMQIVSHWAA
RTRTGDIAELQQIPEDAPVWPWVTSTADNCLGTECPRYNECPLMKARKEAQEADLVVVNHHLFFADAALRGNGAASELLP
TANTVIFDEAHQLPEIAAAFFADTLSTRQIQELGRDSLSEAGHTAADLAELNRLVAAVDKSSMDLRLSLGDGERREPWTE
VAENKAVIEAGEALLQALQELDAFLGPLAKASRGMDACSRRASEQVDCLAAYLKGGQPNRVYWFETFKRSVVLHSTPLSV
AAQLRAQRERNPCSWILTSATLSVGGRFEHIQHRLGLDSARTLRLESPFDFKRQAVFYAPEGLPAPNDSEYTAQLTAAMV
PVINAARGRTFFLFTSHRALREAAAILRQKLDYPLLVQGEAGRRELLDAFREKGNAVLLGTSSFWEGIDVRGEALSCVII
DKLPFGSPGDPVAAARIEHINRNGGNAFRDYQLPQAVLALRQGAGRLIRDPKDTGLLVVADPRLLTRSYGKLFVNSLPNM
TRTRKLDVVQRFFDYLAAQGQEAGKMES
>Mature_668_residues
MLTACILPAPSADTFQGNYVTTARNHLTDLVRFAPLLPGYQPREPQLEMADAVEDVIGSGATLLVEAETGTGKTLAYLVP
ALLSEGPTLVSTGTKSLQDQLFFKDLPMVKKALNLPRKVALLKGRANYLCPYRLELHQEDARFLTRETVGQMQIVSHWAA
RTRTGDIAELQQIPEDAPVWPWVTSTADNCLGTECPRYNECPLMKARKEAQEADLVVVNHHLFFADAALRGNGAASELLP
TANTVIFDEAHQLPEIAAAFFADTLSTRQIQELGRDSLSEAGHTAADLAELNRLVAAVDKSSMDLRLSLGDGERREPWTE
VAENKAVIEAGEALLQALQELDAFLGPLAKASRGMDACSRRASEQVDCLAAYLKGGQPNRVYWFETFKRSVVLHSTPLSV
AAQLRAQRERNPCSWILTSATLSVGGRFEHIQHRLGLDSARTLRLESPFDFKRQAVFYAPEGLPAPNDSEYTAQLTAAMV
PVINAARGRTFFLFTSHRALREAAAILRQKLDYPLLVQGEAGRRELLDAFREKGNAVLLGTSSFWEGIDVRGEALSCVII
DKLPFGSPGDPVAAARIEHINRNGGNAFRDYQLPQAVLALRQGAGRLIRDPKDTGLLVVADPRLLTRSYGKLFVNSLPNM
TRTRKLDVVQRFFDYLAAQGQEAGKMES

Specific function: Unknown

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1788110, Length=626, Percent_Identity=44.5686900958466, Blast_Score=512, Evalue=1e-146,
Organism=Escherichia coli, GI1787018, Length=677, Percent_Identity=29.0989660265879, Blast_Score=181, Evalue=1e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR014013
- InterPro:   IPR006555
- InterPro:   IPR001650
- InterPro:   IPR006935 [H]

Pfam domain/function: PF04851 ResIII [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 73427; Mature: 73427

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTACILPAPSADTFQGNYVTTARNHLTDLVRFAPLLPGYQPREPQLEMADAVEDVIGSG
CCEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCC
ATLLVEAETGTGKTLAYLVPALLSEGPTLVSTGTKSLQDQLFFKDLPMVKKALNLPRKVA
CEEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHH
LLKGRANYLCPYRLELHQEDARFLTRETVGQMQIVSHWAARTRTGDIAELQQIPEDAPVW
HCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCC
PWVTSTADNCLGTECPRYNECPLMKARKEAQEADLVVVNHHLFFADAALRGNGAASELLP
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEECEEEEEEHHHCCCCCHHHHCC
TANTVIFDEAHQLPEIAAAFFADTLSTRQIQELGRDSLSEAGHTAADLAELNRLVAAVDK
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHCC
SSMDLRLSLGDGERREPWTEVAENKAVIEAGEALLQALQELDAFLGPLAKASRGMDACSR
CCCEEEEEECCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
RASEQVDCLAAYLKGGQPNRVYWFETFKRSVVLHSTPLSVAAQLRAQRERNPCSWILTSA
HHHHHHHHHHHHHCCCCCCEEEEEEHHCCCEEEECCCHHHHHHHHHHHCCCCHHEEEEHH
TLSVGGRFEHIQHRLGLDSARTLRLESPFDFKRQAVFYAPEGLPAPNDSEYTAQLTAAMV
HHHCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHH
PVINAARGRTFFLFTSHRALREAAAILRQKLDYPLLVQGEAGRRELLDAFREKGNAVLLG
HHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCEEEEE
TSSFWEGIDVRGEALSCVIIDKLPFGSPGDPVAAARIEHINRNGGNAFRDYQLPQAVLAL
CCHHHCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
RQGAGRLIRDPKDTGLLVVADPRLLTRSYGKLFVNSLPNMTRTRKLDVVQRFFDYLAAQG
HHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
QEAGKMES
CCCCCCCC
>Mature Secondary Structure
MLTACILPAPSADTFQGNYVTTARNHLTDLVRFAPLLPGYQPREPQLEMADAVEDVIGSG
CCEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCC
ATLLVEAETGTGKTLAYLVPALLSEGPTLVSTGTKSLQDQLFFKDLPMVKKALNLPRKVA
CEEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHH
LLKGRANYLCPYRLELHQEDARFLTRETVGQMQIVSHWAARTRTGDIAELQQIPEDAPVW
HCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCC
PWVTSTADNCLGTECPRYNECPLMKARKEAQEADLVVVNHHLFFADAALRGNGAASELLP
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEECEEEEEEHHHCCCCCHHHHCC
TANTVIFDEAHQLPEIAAAFFADTLSTRQIQELGRDSLSEAGHTAADLAELNRLVAAVDK
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHHHHHHCC
SSMDLRLSLGDGERREPWTEVAENKAVIEAGEALLQALQELDAFLGPLAKASRGMDACSR
CCCEEEEEECCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
RASEQVDCLAAYLKGGQPNRVYWFETFKRSVVLHSTPLSVAAQLRAQRERNPCSWILTSA
HHHHHHHHHHHHHCCCCCCEEEEEEHHCCCEEEECCCHHHHHHHHHHHCCCCHHEEEEHH
TLSVGGRFEHIQHRLGLDSARTLRLESPFDFKRQAVFYAPEGLPAPNDSEYTAQLTAAMV
HHHCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHH
PVINAARGRTFFLFTSHRALREAAAILRQKLDYPLLVQGEAGRRELLDAFREKGNAVLLG
HHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCEEEEE
TSSFWEGIDVRGEALSCVIIDKLPFGSPGDPVAAARIEHINRNGGNAFRDYQLPQAVLAL
CCHHHCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
RQGAGRLIRDPKDTGLLVVADPRLLTRSYGKLFVNSLPNMTRTRKLDVVQRFFDYLAAQG
HHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
QEAGKMES
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]