| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
Click here to switch to the map view.
The map label for this gene is mtfA [H]
Identifier: 110833977
GI number: 110833977
Start: 1268675
End: 1269436
Strand: Direct
Name: mtfA [H]
Synonym: ABO_1116
Alternate gene names: 110833977
Gene position: 1268675-1269436 (Clockwise)
Preceding gene: 110833975
Following gene: 110833978
Centisome position: 40.66
GC content: 56.17
Gene sequence:
>762_bases ATGTTTGCAGCCTGGAAAAACTGGCGTGATGCCCGACGCGTTAAGAAAATGGGCTATACCCGCGAGGAGTGGGAGGCCGC TGTGGCGGACTGGCCATTAATGGTTCGATTTGAGGGGCAAGAGCGGCAGGCATTGTTTGATCTGTCGCTGCGTTTTCTGG CCCGCAAAAGCATTGCGTCTGGCGGCGGCTTTGCCTATACCGATGCCATGTGCCTGAAAGTGGCCACCATGGCTTGCGTG CCGATTCTCTACCTAGGGTTGGACTGGTATGACGGTTGGTACACGGTGATTTTGTATGAGGACGCGTTCATTCCTAATCG CCCTCATTTCAGTGAGGATGGCGTTGTTCATACTCGAGGTCCGGTGTTGGCTGGAGAGGCTTGGCACCAGGGGCCGGTTA TTCTCTCTTGGGACGCGATTGAGGAGGCTTGTGCCCCGAGCAATCAAGCCAGTAATGTGGTGATTCACGAGATGTCCCAC AAACTGGATATGCGCCGCAATGGTGCCAACGGCAGGCCGCCACTGCATACCGGGATGAACCCGAAGCAATGGCATGAAAC CTTTACCGCATGCTGGGAAGAGCTGCTGAGCGATTATCAGCACCACCGGCACATGCCGGTGGATGCCTATGCGTTGACCG GCCCGGGTGAATTTTTTGCGGTGTGTAGCGAGGCGTTTTTTGAAGGGCCGGATCAGCTTTACAAGGACTGGCCGGCGCTG TACCGCTTGTTGGCCCAGTTCTATCGGCAGGGAGAGCGATAA
Upstream 100 bases:
>100_bases CACAGGCGTGTTGGCGGGTAATGGCTGGTGAAATGTCGCTTTGATGGTCAGAGTAGGTGGCGTCGCACAACACAAATGAC CGATTGTACGAGGACAATGG
Downstream 100 bases:
>100_bases TGAAGTTTATATTCGAAGTGAGGGTGAAGCCTGGCTTTAGCGTGGATGAGTATGCTAAGGGTTGGGTGGAGGCCAGTGAA ATTATTCAGCAAAGTGCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: Mlc titration factor A [H]
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MFAAWKNWRDARRVKKMGYTREEWEAAVADWPLMVRFEGQERQALFDLSLRFLARKSIASGGGFAYTDAMCLKVATMACV PILYLGLDWYDGWYTVILYEDAFIPNRPHFSEDGVVHTRGPVLAGEAWHQGPVILSWDAIEEACAPSNQASNVVIHEMSH KLDMRRNGANGRPPLHTGMNPKQWHETFTACWEELLSDYQHHRHMPVDAYALTGPGEFFAVCSEAFFEGPDQLYKDWPAL YRLLAQFYRQGER
Sequences:
>Translated_253_residues MFAAWKNWRDARRVKKMGYTREEWEAAVADWPLMVRFEGQERQALFDLSLRFLARKSIASGGGFAYTDAMCLKVATMACV PILYLGLDWYDGWYTVILYEDAFIPNRPHFSEDGVVHTRGPVLAGEAWHQGPVILSWDAIEEACAPSNQASNVVIHEMSH KLDMRRNGANGRPPLHTGMNPKQWHETFTACWEELLSDYQHHRHMPVDAYALTGPGEFFAVCSEAFFEGPDQLYKDWPAL YRLLAQFYRQGER >Mature_253_residues MFAAWKNWRDARRVKKMGYTREEWEAAVADWPLMVRFEGQERQALFDLSLRFLARKSIASGGGFAYTDAMCLKVATMACV PILYLGLDWYDGWYTVILYEDAFIPNRPHFSEDGVVHTRGPVLAGEAWHQGPVILSWDAIEEACAPSNQASNVVIHEMSH KLDMRRNGANGRPPLHTGMNPKQWHETFTACWEELLSDYQHHRHMPVDAYALTGPGEFFAVCSEAFFEGPDQLYKDWPAL YRLLAQFYRQGER
Specific function: Involved in the regulation of ptsG expression by binding and inactivating mlc [H]
COG id: COG3228
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mtfA family [H]
Homologues:
Organism=Escherichia coli, GI87082014, Length=240, Percent_Identity=33.3333333333333, Blast_Score=130, Evalue=1e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010384 [H]
Pfam domain/function: PF06167 DUF980 [H]
EC number: NA
Molecular weight: Translated: 29124; Mature: 29124
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFAAWKNWRDARRVKKMGYTREEWEAAVADWPLMVRFEGQERQALFDLSLRFLARKSIAS CCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHCC GGGFAYTDAMCLKVATMACVPILYLGLDWYDGWYTVILYEDAFIPNRPHFSEDGVVHTRG CCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCEEEEEEEECCCCCCCCCCCCCCEEEECC PVLAGEAWHQGPVILSWDAIEEACAPSNQASNVVIHEMSHKLDMRRNGANGRPPLHTGMN CEEECCCCCCCCEEEEHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC PKQWHETFTACWEELLSDYQHHRHMPVDAYALTGPGEFFAVCSEAFFEGPDQLYKDWPAL HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHH YRLLAQFYRQGER HHHHHHHHHCCCC >Mature Secondary Structure MFAAWKNWRDARRVKKMGYTREEWEAAVADWPLMVRFEGQERQALFDLSLRFLARKSIAS CCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHCC GGGFAYTDAMCLKVATMACVPILYLGLDWYDGWYTVILYEDAFIPNRPHFSEDGVVHTRG CCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCEEEEEEEECCCCCCCCCCCCCCEEEECC PVLAGEAWHQGPVILSWDAIEEACAPSNQASNVVIHEMSHKLDMRRNGANGRPPLHTGMN CEEECCCCCCCCEEEEHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC PKQWHETFTACWEELLSDYQHHRHMPVDAYALTGPGEFFAVCSEAFFEGPDQLYKDWPAL HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHH YRLLAQFYRQGER HHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA