| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110833972
Identifier: 110833972
GI number: 110833972
Start: 1264273
End: 1265058
Strand: Direct
Name: 110833972
Synonym: ABO_1111
Alternate gene names: NA
Gene position: 1264273-1265058 (Clockwise)
Preceding gene: 110833970
Following gene: 110833973
Centisome position: 40.52
GC content: 54.58
Gene sequence:
>786_bases ATGACATTCGATGAGATTCTAGCCACGATTGATGGCCAGGGTAACGCCACGTTTCCAGAAGGGTGGGGGCAGGGCCGGAC CTTATTTGGTGGCCTGGTGGGGGCGGTGCTGTTTGAACATTTAGAAAAAACCGTGGCTCGCGGGAGGTTTCTACGTAGTT TTTCTCTCTCTTTTGTCGCCCCTGCGGTGCCGGGTCCGGTGGCACTAGACGAGACTGTGTTTCGGGAAGGCAAATCCGTT ATGCAGGCCATGGTCTCCGCCCGTCAAGGAGGGCAGGTGGTGGCGGTTATGTTGGCCAGCTTTGGGGCCAGTCGCCAATC CAGTGTAGTGGTAGAAGGGCCATCGGCCCCAGTGATGAAATCTCCAGAGCAGAGTATTTCGGTACCGTTTATCAAAGGAT TGACGCCGGATTTTTTTTCCCATTTTAATATCCATTACGCAGAAGGCATGCCGCCGTTCAGTGGCAGTTCTGAGCCCGAT TACGGTGGTTACATGGGGTTTACTGTGCCGCCGGAAACCATGAGCACCGCAGCGCTGATTGCATTGGTGGATACCTGGGC GCCTTCAGTTTTACCTCTGCTCAAAGGGCCAGCACCCGCCAGTTCCTTGACCTGGACCATGGAGCTCTTGGATGACCCTA GTGTCCACTCGCCGGAGACTTTATGGCAATATCGGGTAAACACGGACCAATGCAGTGATGGCTATGGTCAAAGTCAGGCG GTGGTTTGGGATGCTGCGGGTAAGGCTGTGGCGTTGAGTCGACAAACCTTTACGGTATTTGCATGA
Upstream 100 bases:
>100_bases CGCCGTTAATCCTCTTTGAGCCGGCATAATGACTTTTACTGGCTTCGCAGGAATGGTAAATAAAGCACCGCAAATTCAAA ACACGCAGAAGTGAGAGACC
Downstream 100 bases:
>100_bases AATCGGAACTGGTGCCACTCACGGCGCGGACTTTAGGTAAGCAAGTGCCTCGTCGTGGGCACTGGCTGTTGGCGGCGCTA GGGCGGCTGATTTTGACTGT
Product: tesB-like acyl-CoA thioesterase
Products: NA
Alternate protein names: TesB-Like Acyl-CoA Thioesterase; TesB Family Acyl-CoA Thioesterase; Acyl-CoA Thioesterase; Thioesterase-Like Protein; Thioesterase Superfamily Protein; Acyl-CoA Thioesterase TesB Family Protein; Acyl-CoA Thioesterase-Like Protein
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MTFDEILATIDGQGNATFPEGWGQGRTLFGGLVGAVLFEHLEKTVARGRFLRSFSLSFVAPAVPGPVALDETVFREGKSV MQAMVSARQGGQVVAVMLASFGASRQSSVVVEGPSAPVMKSPEQSISVPFIKGLTPDFFSHFNIHYAEGMPPFSGSSEPD YGGYMGFTVPPETMSTAALIALVDTWAPSVLPLLKGPAPASSLTWTMELLDDPSVHSPETLWQYRVNTDQCSDGYGQSQA VVWDAAGKAVALSRQTFTVFA
Sequences:
>Translated_261_residues MTFDEILATIDGQGNATFPEGWGQGRTLFGGLVGAVLFEHLEKTVARGRFLRSFSLSFVAPAVPGPVALDETVFREGKSV MQAMVSARQGGQVVAVMLASFGASRQSSVVVEGPSAPVMKSPEQSISVPFIKGLTPDFFSHFNIHYAEGMPPFSGSSEPD YGGYMGFTVPPETMSTAALIALVDTWAPSVLPLLKGPAPASSLTWTMELLDDPSVHSPETLWQYRVNTDQCSDGYGQSQA VVWDAAGKAVALSRQTFTVFA >Mature_260_residues TFDEILATIDGQGNATFPEGWGQGRTLFGGLVGAVLFEHLEKTVARGRFLRSFSLSFVAPAVPGPVALDETVFREGKSVM QAMVSARQGGQVVAVMLASFGASRQSSVVVEGPSAPVMKSPEQSISVPFIKGLTPDFFSHFNIHYAEGMPPFSGSSEPDY GGYMGFTVPPETMSTAALIALVDTWAPSVLPLLKGPAPASSLTWTMELLDDPSVHSPETLWQYRVNTDQCSDGYGQSQAV VWDAAGKAVALSRQTFTVFA
Specific function: Unknown
COG id: COG1946
COG function: function code I; Acyl-CoA thioesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27818; Mature: 27687
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFDEILATIDGQGNATFPEGWGQGRTLFGGLVGAVLFEHLEKTVARGRFLRSFSLSFVA CCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PAVPGPVALDETVFREGKSVMQAMVSARQGGQVVAVMLASFGASRQSSVVVEGPSAPVMK CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCC SPEQSISVPFIKGLTPDFFSHFNIHYAEGMPPFSGSSEPDYGGYMGFTVPPETMSTAALI CCCHHCCCCHHHCCCHHHHHHCCEEECCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHH ALVDTWAPSVLPLLKGPAPASSLTWTMELLDDPSVHSPETLWQYRVNTDQCSDGYGQSQA HHHHHCCHHHHHHHCCCCCCCHHEEEEEECCCCCCCCCHHHEEEECCCCCCCCCCCCCCE VVWDAAGKAVALSRQTFTVFA EEEECCCCEEEEECCEEEEEC >Mature Secondary Structure TFDEILATIDGQGNATFPEGWGQGRTLFGGLVGAVLFEHLEKTVARGRFLRSFSLSFVA CHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PAVPGPVALDETVFREGKSVMQAMVSARQGGQVVAVMLASFGASRQSSVVVEGPSAPVMK CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCC SPEQSISVPFIKGLTPDFFSHFNIHYAEGMPPFSGSSEPDYGGYMGFTVPPETMSTAALI CCCHHCCCCHHHCCCHHHHHHCCEEECCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHH ALVDTWAPSVLPLLKGPAPASSLTWTMELLDDPSVHSPETLWQYRVNTDQCSDGYGQSQA HHHHHCCHHHHHHHCCCCCCCHHEEEEEECCCCCCCCCHHHEEEECCCCCCCCCCCCCCE VVWDAAGKAVALSRQTFTVFA EEEECCCCEEEEECCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA