| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is acrR [C]
Identifier: 110833943
GI number: 110833943
Start: 1224580
End: 1225215
Strand: Direct
Name: acrR [C]
Synonym: ABO_1082
Alternate gene names: 110833943
Gene position: 1224580-1225215 (Clockwise)
Preceding gene: 110833940
Following gene: 110833944
Centisome position: 39.25
GC content: 49.06
Gene sequence:
>636_bases ATGGGTGATCTGGAAAAAGCCACGCGTAAAGCACAGGAATTTCGTCAGCGAGAACGTGAAATTCTCGATGCCGCTCTGGC CCTTTTTCTGGAAGAAGGCGAAGACCGAGTAACCGTGGAAATGATTGCGGACCGGGTAGGTATCGGCAAAGGAACCATCT ACAAGCATTTTGAAACCAAGAACGAAATTTACCTGTTGCTGATGCTGCGCTACGAAGAAGACTTGGCAGGGGTCTTTCAA AAGATTTCCGATGTCGATAATAAGGAAACGTTAGCCCGGGAGTATTTTCGTTTCCGGATATCTGATCCTAAGCGATACCA GTTGTTTGATCGGTTGGAAAACAAGGTGATCAAGGACCACGCGCTGCCGGAGTTGGTGGAGAAACTACACAGCATCCGCA AAGCCAACTTTGCTCGGCTCACCGAGATTGTGAAGGCGAGAATGGAAGAAGGGTCGCTGGAAGAGGTGCCGGCCATCTAT CACATTTGCTCTGCTTGGGCGCTGGCCCATGGTGCGGCGGCATTGATGGAATCACCGTTTTATCAAAAACTGATTGATGA CAAGGATGATTTTCTCGACTTCCTTATTGAAATTGGTATTCGTATGGGGAACAAAGGGCAGCGAGGTCCGCGATGA
Upstream 100 bases:
>100_bases TGAGAGGTTGCAGTGGGCTTAGCGGATAGGCGCGCAAAAGGGAATACGTTAGAATTGCGACTGTTCAGTCCGCTACGGAG GTGGACGCAAGGAGAAAAAG
Downstream 100 bases:
>100_bases AACAAGCCGAGGCGCTGCTTACGTTACTGGAAAAAGCGGCCGATGATGAAACCGGCCTGCCGCCGGTGCATCAATGGAAC CCGGAACGTCATGCGGACAT
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MGDLEKATRKAQEFRQREREILDAALALFLEEGEDRVTVEMIADRVGIGKGTIYKHFETKNEIYLLLMLRYEEDLAGVFQ KISDVDNKETLAREYFRFRISDPKRYQLFDRLENKVIKDHALPELVEKLHSIRKANFARLTEIVKARMEEGSLEEVPAIY HICSAWALAHGAAALMESPFYQKLIDDKDDFLDFLIEIGIRMGNKGQRGPR
Sequences:
>Translated_211_residues MGDLEKATRKAQEFRQREREILDAALALFLEEGEDRVTVEMIADRVGIGKGTIYKHFETKNEIYLLLMLRYEEDLAGVFQ KISDVDNKETLAREYFRFRISDPKRYQLFDRLENKVIKDHALPELVEKLHSIRKANFARLTEIVKARMEEGSLEEVPAIY HICSAWALAHGAAALMESPFYQKLIDDKDDFLDFLIEIGIRMGNKGQRGPR >Mature_210_residues GDLEKATRKAQEFRQREREILDAALALFLEEGEDRVTVEMIADRVGIGKGTIYKHFETKNEIYLLLMLRYEEDLAGVFQK ISDVDNKETLAREYFRFRISDPKRYQLFDRLENKVIKDHALPELVEKLHSIRKANFARLTEIVKARMEEGSLEEVPAIYH ICSAWALAHGAAALMESPFYQKLIDDKDDFLDFLIEIGIRMGNKGQRGPR
Specific function: Potential Regulator Protein For The Acrab Genes. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24524; Mature: 24392
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDLEKATRKAQEFRQREREILDAALALFLEEGEDRVTVEMIADRVGIGKGTIYKHFETK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHCCC NEIYLLLMLRYEEDLAGVFQKISDVDNKETLAREYFRFRISDPKRYQLFDRLENKVIKDH CCEEEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH ALPELVEKLHSIRKANFARLTEIVKARMEEGSLEEVPAIYHICSAWALAHGAAALMESPF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHH YQKLIDDKDDFLDFLIEIGIRMGNKGQRGPR HHHHHCCHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure GDLEKATRKAQEFRQREREILDAALALFLEEGEDRVTVEMIADRVGIGKGTIYKHFETK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHCCC NEIYLLLMLRYEEDLAGVFQKISDVDNKETLAREYFRFRISDPKRYQLFDRLENKVIKDH CCEEEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH ALPELVEKLHSIRKANFARLTEIVKARMEEGSLEEVPAIYHICSAWALAHGAAALMESPF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHH YQKLIDDKDDFLDFLIEIGIRMGNKGQRGPR HHHHHCCHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA