Click here to switch to the map view.

The map label for this gene is exbD1 [C]

Identifier: 110833915

GI number: 110833915

Start: 1195666

End: 1196091

Strand: Direct

Name: exbD1 [C]

Synonym: ABO_1054

Alternate gene names: 110833915

Gene position: 1195666-1196091 (Clockwise)

Preceding gene: 110833914

Following gene: 110833916

Centisome position: 38.32

GC content: 49.53

Gene sequence:

>426_bases
GTGAAATTTCCCCGGCCCAGCCAGGAGGAAATTAGCGTTAACCTAACACCTTTGATTGATGTGGTGTTTTTGCTGCTAAT
TTTTTTCATGGTATCGACGACGTTCGATGATAAAACGCAACTGTCGATTACCCTGCCGGAAGCGGACGGGGTTCCCTTAG
CGCAGATAAATGATCAGGTTGAAGTGACCATTACCTCCACCGGCGATTACTTGGTGAACGGTGAGAGGCTTACTGCCAGT
GACAGCAATAGCCTACGCACTGCATTGTTACGGCTAGGCCAGGATAAAGTGAACTACCCCTTACAAATTTACGCGGATGC
CAATGTGGCCTATCAAGCGGTCGTGCGTGTTTATGACGTGGCCGGGCAACTGGGTTTTGTTAAGCTATCGCTCACCACTC
GCGAATCTCCTAACGAGGCACAATGA

Upstream 100 bases:

>100_bases
TACGTCGGGTGGAAGAAATCACTGTTGAGTTGGAGCAAAGCGCTGTTCACGTGGTGGATCTGGTGCACGGTGATCGTGAG
GCAGAACCGGGGGACAAGGC

Downstream 100 bases:

>100_bases
GTCAACCTATTCCCCCTGAGGACGTGTGGCCAACCTACAAGCGGCTACTGAGTTATGTTCGTCCTTACTGGTTTATGCTG
GTTATCAGCGTTATTGGCTA

Product: biopolymer transport protein ExbD

Products: NA

Alternate protein names: Biopolymer ExbD/lR Family Transporter; Transport Energizing Protein ExbD/lR Family; GTP Cyclohydrolase I; Biopolymer Transport Protein ExbD; ExbD/lR Family Protein; Biopolymer Transporter ExbD/lR Family Protein; Biopolymer Transport Exbd Protein

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MKFPRPSQEEISVNLTPLIDVVFLLLIFFMVSTTFDDKTQLSITLPEADGVPLAQINDQVEVTITSTGDYLVNGERLTAS
DSNSLRTALLRLGQDKVNYPLQIYADANVAYQAVVRVYDVAGQLGFVKLSLTTRESPNEAQ

Sequences:

>Translated_141_residues
MKFPRPSQEEISVNLTPLIDVVFLLLIFFMVSTTFDDKTQLSITLPEADGVPLAQINDQVEVTITSTGDYLVNGERLTAS
DSNSLRTALLRLGQDKVNYPLQIYADANVAYQAVVRVYDVAGQLGFVKLSLTTRESPNEAQ
>Mature_141_residues
MKFPRPSQEEISVNLTPLIDVVFLLLIFFMVSTTFDDKTQLSITLPEADGVPLAQINDQVEVTITSTGDYLVNGERLTAS
DSNSLRTALLRLGQDKVNYPLQIYADANVAYQAVVRVYDVAGQLGFVKLSLTTRESPNEAQ

Specific function: Involved In The Tonb-Dependent Energy-Dependent Transport Of Various Receptor-Bound Substrates. [C]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Type II Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15569; Mature: 15569

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFPRPSQEEISVNLTPLIDVVFLLLIFFMVSTTFDDKTQLSITLPEADGVPLAQINDQV
CCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEECCCEE
EVTITSTGDYLVNGERLTASDSNSLRTALLRLGQDKVNYPLQIYADANVAYQAVVRVYDV
EEEEEECCCEEEECCEEECCCCCHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHH
AGQLGFVKLSLTTRESPNEAQ
CCCCEEEEEEEEECCCCCCCC
>Mature Secondary Structure
MKFPRPSQEEISVNLTPLIDVVFLLLIFFMVSTTFDDKTQLSITLPEADGVPLAQINDQV
CCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEECCCEE
EVTITSTGDYLVNGERLTASDSNSLRTALLRLGQDKVNYPLQIYADANVAYQAVVRVYDV
EEEEEECCCEEEECCEEECCCCCHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHH
AGQLGFVKLSLTTRESPNEAQ
CCCCEEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA