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The map label for this gene is ynaI [H]

Identifier: 110833880

GI number: 110833880

Start: 1156919

End: 1158076

Strand: Direct

Name: ynaI [H]

Synonym: ABO_1019

Alternate gene names: 110833880

Gene position: 1156919-1158076 (Clockwise)

Preceding gene: 110833879

Following gene: 110833881

Centisome position: 37.08

GC content: 51.64

Gene sequence:

>1158_bases
ATGAACTGGGATTGGAATCAACTGCTGCAGTGGCCAACGGTCGAGACGCCAATGGATATCTGGCTGACTCAGCTGTTTAT
CATTGTGCTGTGCACTGTCTCCATCAATTTTATTTTGATGCGCAGCATCGACGTGGCTGAGCGGTTAATTGGAAAAACTG
AAACCCTGTGGGATGACGCCTTGCTGGAAGCCGTGCGAATTCCCGTGCGTTTGGTGTTCTGGGTCATTGGCTTGTCCGTG
TCCATGGAGCTGTTGCAGGCGGTTTCACAGGAAGACAACGTGCTGTTTGAAATGGTGCCACAGGCTCGTCGCATTGCCTT
TATTATCATTATTGCCATGTTCCTGAGCCGGTTTATTTCCTATACCGAAAAGAACCTGATTGATCCGGGCCGCATGCGTA
AACCCATGGATCAATCCACGGCGGCGGCGGTTGCCAAGTTGTTGCGGGTGTCGGTCATTATTACCTCCCTGCTGATTATT
TTGCAGACGTTGGGCTATAGCATTTCCGGTGTGCTGGCCTTTGGCGGTATTGGCGGCATGGCGGTAGCCTTTGCTGCCAA
GGATCTATTGGCCAACTTCTTCGGCGGCATGATGGTCTACCTGGATAAACCATTCCGGGTGGGGGATTGGGTGCGTTCAC
CGGATCGTTCCATCGAAGGTAGCGTGGAGGATATCGGTTGGCGCCTAACGCGCATCCGCACCTTTGATCAACGCCCGCTG
TATATTCCCAATGCCATGTTTACCTCCATCGTGCTGGAAAACCCGTCGCGGATGTACAACCGCCGAATCAATGAAAAAAT
CGGCATCCGTTATGATGATTGGCAGAAAATGCCCGCCATTGTGGCGGACGTTCGCACCATGCTGGTTGAACATGAAGATC
TGGAAACGGATAAGCGCACGTTGATCGTGAACTTCGATAGCTATGGAGCCTCTCACCTGGAGTTCTTTATTTATACGTTC
ACTAAAACCACGGAGTGGGTTCAGTATCATGAGATCAAACAAGATGTGCTGATGAAAATCATGAATATTGTCCATCAACA
CGGTGCCGAATTTGCGTTCCCCACACGCACGTTGCACCTGGTTGGCCAGAACGATGATGCCCCGGCAACGGGTTTGGAAG
ACAGCAACGCGGAGGAGCTCCAGCATGTCCAGCGCTGA

Upstream 100 bases:

>100_bases
GCGCCTGCCTATGGACGCACAGCGCAGGGCGGTGGCCGCTGATTTGGCTGCAGCATTACGTGAACACTGAATTGAACCGT
AAACGCGAAGGACAATATTA

Downstream 100 bases:

>100_bases
AGAACTGCAAAAGGAATTAATGACAGTTCGGCGTAACGCCATCGAACTGCATTCCTCTGATCAGGTACAGGAAGCCATCG
GTAAACTGGCCTTTGAAGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MNWDWNQLLQWPTVETPMDIWLTQLFIIVLCTVSINFILMRSIDVAERLIGKTETLWDDALLEAVRIPVRLVFWVIGLSV
SMELLQAVSQEDNVLFEMVPQARRIAFIIIIAMFLSRFISYTEKNLIDPGRMRKPMDQSTAAAVAKLLRVSVIITSLLII
LQTLGYSISGVLAFGGIGGMAVAFAAKDLLANFFGGMMVYLDKPFRVGDWVRSPDRSIEGSVEDIGWRLTRIRTFDQRPL
YIPNAMFTSIVLENPSRMYNRRINEKIGIRYDDWQKMPAIVADVRTMLVEHEDLETDKRTLIVNFDSYGASHLEFFIYTF
TKTTEWVQYHEIKQDVLMKIMNIVHQHGAEFAFPTRTLHLVGQNDDAPATGLEDSNAEELQHVQR

Sequences:

>Translated_385_residues
MNWDWNQLLQWPTVETPMDIWLTQLFIIVLCTVSINFILMRSIDVAERLIGKTETLWDDALLEAVRIPVRLVFWVIGLSV
SMELLQAVSQEDNVLFEMVPQARRIAFIIIIAMFLSRFISYTEKNLIDPGRMRKPMDQSTAAAVAKLLRVSVIITSLLII
LQTLGYSISGVLAFGGIGGMAVAFAAKDLLANFFGGMMVYLDKPFRVGDWVRSPDRSIEGSVEDIGWRLTRIRTFDQRPL
YIPNAMFTSIVLENPSRMYNRRINEKIGIRYDDWQKMPAIVADVRTMLVEHEDLETDKRTLIVNFDSYGASHLEFFIYTF
TKTTEWVQYHEIKQDVLMKIMNIVHQHGAEFAFPTRTLHLVGQNDDAPATGLEDSNAEELQHVQR
>Mature_385_residues
MNWDWNQLLQWPTVETPMDIWLTQLFIIVLCTVSINFILMRSIDVAERLIGKTETLWDDALLEAVRIPVRLVFWVIGLSV
SMELLQAVSQEDNVLFEMVPQARRIAFIIIIAMFLSRFISYTEKNLIDPGRMRKPMDQSTAAAVAKLLRVSVIITSLLII
LQTLGYSISGVLAFGGIGGMAVAFAAKDLLANFFGGMMVYLDKPFRVGDWVRSPDRSIEGSVEDIGWRLTRIRTFDQRPL
YIPNAMFTSIVLENPSRMYNRRINEKIGIRYDDWQKMPAIVADVRTMLVEHEDLETDKRTLIVNFDSYGASHLEFFIYTF
TKTTEWVQYHEIKQDVLMKIMNIVHQHGAEFAFPTRTLHLVGQNDDAPATGLEDSNAEELQHVQR

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mscS (TC 1.A.23) family [H]

Homologues:

Organism=Escherichia coli, GI1787591, Length=267, Percent_Identity=47.1910112359551, Blast_Score=263, Evalue=1e-71,
Organism=Escherichia coli, GI1789291, Length=263, Percent_Identity=25.8555133079848, Blast_Score=86, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010920
- InterPro:   IPR011066
- InterPro:   IPR006685
- InterPro:   IPR006686
- InterPro:   IPR011014 [H]

Pfam domain/function: PF00924 MS_channel [H]

EC number: NA

Molecular weight: Translated: 44198; Mature: 44198

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: PS01246 UPF0003

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWDWNQLLQWPTVETPMDIWLTQLFIIVLCTVSINFILMRSIDVAERLIGKTETLWDDA
CCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LLEAVRIPVRLVFWVIGLSVSMELLQAVSQEDNVLFEMVPQARRIAFIIIIAMFLSRFIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
YTEKNLIDPGRMRKPMDQSTAAAVAKLLRVSVIITSLLIILQTLGYSISGVLAFGGIGGM
HHHHCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHH
AVAFAAKDLLANFFGGMMVYLDKPFRVGDWVRSPDRSIEGSVEDIGWRLTRIRTFDQRPL
HHHHHHHHHHHHHHCCEEEEECCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHEECCCCCC
YIPNAMFTSIVLENPSRMYNRRINEKIGIRYDDWQKMPAIVADVRTMLVEHEDLETDKRT
CCCHHHHHHHHHCCHHHHHHHHCCHHCCCEECCHHHHHHHHHHHHHHHHHHCCCCCCCCE
LIVNFDSYGASHLEFFIYTFTKTTEWVQYHEIKQDVLMKIMNIVHQHGAEFAFPTRTLHL
EEEEECCCCCCHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
VGQNDDAPATGLEDSNAEELQHVQR
EECCCCCCCCCCCCCCHHHHHHHCC
>Mature Secondary Structure
MNWDWNQLLQWPTVETPMDIWLTQLFIIVLCTVSINFILMRSIDVAERLIGKTETLWDDA
CCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LLEAVRIPVRLVFWVIGLSVSMELLQAVSQEDNVLFEMVPQARRIAFIIIIAMFLSRFIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
YTEKNLIDPGRMRKPMDQSTAAAVAKLLRVSVIITSLLIILQTLGYSISGVLAFGGIGGM
HHHHCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHH
AVAFAAKDLLANFFGGMMVYLDKPFRVGDWVRSPDRSIEGSVEDIGWRLTRIRTFDQRPL
HHHHHHHHHHHHHHCCEEEEECCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHEECCCCCC
YIPNAMFTSIVLENPSRMYNRRINEKIGIRYDDWQKMPAIVADVRTMLVEHEDLETDKRT
CCCHHHHHHHHHCCHHHHHHHHCCHHCCCEECCHHHHHHHHHHHHHHHHHHCCCCCCCCE
LIVNFDSYGASHLEFFIYTFTKTTEWVQYHEIKQDVLMKIMNIVHQHGAEFAFPTRTLHL
EEEEECCCCCCHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
VGQNDDAPATGLEDSNAEELQHVQR
EECCCCCCCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]