The gene/protein map for NC_011884 is currently unavailable.
Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

Click here to switch to the map view.

The map label for this gene is 110833875

Identifier: 110833875

GI number: 110833875

Start: 1152370

End: 1153161

Strand: Direct

Name: 110833875

Synonym: ABO_1014

Alternate gene names: NA

Gene position: 1152370-1153161 (Clockwise)

Preceding gene: 110833874

Following gene: 110833876

Centisome position: 36.93

GC content: 54.92

Gene sequence:

>792_bases
ATGAACGTTCGTTTACTGCCTGCCGTTTTGTTTATCAGCTTGGCTGCGCCCACTGTGCTGGCCCAGAGCCCGGAAGAAAA
AGGGCTGCAAATCGCCCAGGAGGCGGATAGCCGTGGCGAGGGTTTCGGGGACTTCCAGGCGGACATGAAAATGGTGCTGA
TCAGTAAGAGCGGCCAGACCTCTGAGCGGGAGCTGCGAGTGAAAACGCTGGAAGGCACCGGCGAGGGGGAGGGCGACAAG
AGCTTGACCATTTTCGATACCCCCCGTGATGTACGTGGTACGGCCATGCTCACGTTCAGCTACAAAACCCGCGACGACGA
CCAGTGGCTGTATCTGCCCGCCCTCCGCCGGGTAAAGACCATCGCCTCGCGGAATAAATCCGGGCCTTTCATGGGCAGTG
AGTTTAGTTTTGAAGACATGCGCGGCCAGGAAGTGGAGAAATACACCTACGAATACCTGCGCGATGAGCCCTGCGGCGAG
CTGACCTGTTTTGTGGTAGCTCGTTACCCGCAAGATGAAGACTCCGGTTATATCCGTCAGGTTTCCTGGATCGATCAGCA
GGAATACCGTACCTGGAAAGTAGATTATTACGATCGCAAGGAAAGCCTGCTCAAGACACTGAAAGCCAGTGATTTTTCCC
AGTACCAGGACAAGTATTGGCAGCCTGGGAAGATGTCCATGGTCAACCACCAAACCGGAAAATCCACCGACCTATTCTGG
AGTAACTACCGCTACGGTACCGGGCTGGACGGTGCGGATTTCAACAAAAATAGCTTGAAACGCGCACGTTGA

Upstream 100 bases:

>100_bases
CTTTGAGCATCGCCGTTTTGGTTTAAATCGCTATCATGGTAAACACGCTGTTGCTTGCTTTGCCGGCATCGCCCCAGACA
TGTGTACCGTGAGGAACTCC

Downstream 100 bases:

>100_bases
TCTCGCGCGTTAGTACTATGAAAATCGGGTTGGTTACGGCTTCGCTGTTGACGATGCCATTGGCTTCCTTTGCGTGGGAA
TTTCGCGGTGAAGTGGGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MNVRLLPAVLFISLAAPTVLAQSPEEKGLQIAQEADSRGEGFGDFQADMKMVLISKSGQTSERELRVKTLEGTGEGEGDK
SLTIFDTPRDVRGTAMLTFSYKTRDDDQWLYLPALRRVKTIASRNKSGPFMGSEFSFEDMRGQEVEKYTYEYLRDEPCGE
LTCFVVARYPQDEDSGYIRQVSWIDQQEYRTWKVDYYDRKESLLKTLKASDFSQYQDKYWQPGKMSMVNHQTGKSTDLFW
SNYRYGTGLDGADFNKNSLKRAR

Sequences:

>Translated_263_residues
MNVRLLPAVLFISLAAPTVLAQSPEEKGLQIAQEADSRGEGFGDFQADMKMVLISKSGQTSERELRVKTLEGTGEGEGDK
SLTIFDTPRDVRGTAMLTFSYKTRDDDQWLYLPALRRVKTIASRNKSGPFMGSEFSFEDMRGQEVEKYTYEYLRDEPCGE
LTCFVVARYPQDEDSGYIRQVSWIDQQEYRTWKVDYYDRKESLLKTLKASDFSQYQDKYWQPGKMSMVNHQTGKSTDLFW
SNYRYGTGLDGADFNKNSLKRAR
>Mature_263_residues
MNVRLLPAVLFISLAAPTVLAQSPEEKGLQIAQEADSRGEGFGDFQADMKMVLISKSGQTSERELRVKTLEGTGEGEGDK
SLTIFDTPRDVRGTAMLTFSYKTRDDDQWLYLPALRRVKTIASRNKSGPFMGSEFSFEDMRGQEVEKYTYEYLRDEPCGE
LTCFVVARYPQDEDSGYIRQVSWIDQQEYRTWKVDYYDRKESLLKTLKASDFSQYQDKYWQPGKMSMVNHQTGKSTDLFW
SNYRYGTGLDGADFNKNSLKRAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30272; Mature: 30272

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVRLLPAVLFISLAAPTVLAQSPEEKGLQIAQEADSRGEGFGDFQADMKMVLISKSGQT
CCCCHHHHHHHHHHHCCHHHHCCCHHHCCHHHHHHCCCCCCCCCCCCCEEEEEEECCCCC
SERELRVKTLEGTGEGEGDKSLTIFDTPRDVRGTAMLTFSYKTRDDDQWLYLPALRRVKT
CCCEEEEEEECCCCCCCCCCEEEEEECCCCCCCEEEEEEEEECCCCCCEEEHHHHHHHHH
IASRNKSGPFMGSEFSFEDMRGQEVEKYTYEYLRDEPCGELTCFVVARYPQDEDSGYIRQ
HHHCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCEEEE
VSWIDQQEYRTWKVDYYDRKESLLKTLKASDFSQYQDKYWQPGKMSMVNHQTGKSTDLFW
EECCCCCCCEEEEEEEHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEECCCCCCCCEEE
SNYRYGTGLDGADFNKNSLKRAR
CCCCCCCCCCCCCCCHHHHCCCC
>Mature Secondary Structure
MNVRLLPAVLFISLAAPTVLAQSPEEKGLQIAQEADSRGEGFGDFQADMKMVLISKSGQT
CCCCHHHHHHHHHHHCCHHHHCCCHHHCCHHHHHHCCCCCCCCCCCCCEEEEEEECCCCC
SERELRVKTLEGTGEGEGDKSLTIFDTPRDVRGTAMLTFSYKTRDDDQWLYLPALRRVKT
CCCEEEEEEECCCCCCCCCCEEEEEECCCCCCCEEEEEEEEECCCCCCEEEHHHHHHHHH
IASRNKSGPFMGSEFSFEDMRGQEVEKYTYEYLRDEPCGELTCFVVARYPQDEDSGYIRQ
HHHCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCEEEE
VSWIDQQEYRTWKVDYYDRKESLLKTLKASDFSQYQDKYWQPGKMSMVNHQTGKSTDLFW
EECCCCCCCEEEEEEEHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEECCCCCCCCEEE
SNYRYGTGLDGADFNKNSLKRAR
CCCCCCCCCCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]