| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110833842
Identifier: 110833842
GI number: 110833842
Start: 1106161
End: 1107180
Strand: Direct
Name: 110833842
Synonym: ABO_0981
Alternate gene names: NA
Gene position: 1106161-1107180 (Clockwise)
Preceding gene: 110833840
Following gene: 110833843
Centisome position: 35.45
GC content: 53.63
Gene sequence:
>1020_bases ATGTCACTAGATTATCCCTTTACTGAGCTGCCGTTGGCGGGTCAACGCTTCAAGGTTGCCGAAGGTGTTTTCTGGCTGCG TTTTCCGTTGCCGTTTGCTCTTGACCATATCAATCTTTGGTTGCTTGAAGACACCCATGGCTGGGTCATCTTGGATACCG GTCTTGGGGTGCGGCGCAGTCGCGAAATTTGGCAGCAGTTGCTGGCTGAACAGCTCGACGGCAAACCCGTAACTCGGGTT ATTGTTACCCATTACCACCCTGACCATCTTGGCATGGCCGGTTGGCTTGAGCAGCATTGTGGGGTGCCGGTGACGATGAG TCATGGTGAGTGGCAGCTGGCTGACAGTATTTGTACTGCCTCTGATGCTCAAACTATTGAGCGTTTCAAAGCGTTTCTTG CCAGCCATGGACTATTGGGTGACGACCTGAACAAAGTGGCGGGTAAAGGTAATGGCTTTCGCCGCGTGGTTATGCCGCTG CCTAAATCCCCGGACTTTATCGGCGAGGGCGATTTGCTGCTTATTAATGGTGAGCCTTGGCAGGTGTATATTGGCCGTGG CCATTCGCCGGAGCATCTGTGCCTGTATCGCGAGAAAGACCACGTGTTACTCAGTGGCGACCAGGTGCTGCCGACTATTT CCAGTAACTTAATGGTACGTCCCACGGAGCCTGAGGCTAATCCGGTGATGGCATTTGTCGATAGCCTGACAGTGATACGC GATGCGCTTCCTAAAGACACCCTAGTGTTGCCCGCCCACGGGCTGCCATTTCGCGGGTTGCATGCGCGCATTAATGCGTT AGTGGATCATCATTCGCAGCAGCTGGAGCAGGTGCTGGTTGCCTGTGGGCAGCAGCCCCATAATGCTCACGATATGCTGC CGGTAATGTTTAAGCGCGAATTGGATGTGCAGCAAATGATGTTTGCAATGGGGGAAAGCATTGCGCATCTCAACTGCCTG CTGGAGCAAGGCAAAGTGCAGCGCGAAGAGCGTAACGGTATTTGGTATTTCGCAGCCTGA
Upstream 100 bases:
>100_bases CCTGTCGTTGTGCTCACAGACCAGTGGCACGGCAAAAGGTACTGGTTTTTTCTGTGTATCGAATGATCACCCCCTGTTCG CCAAAAACAAAAGGTCCCTT
Downstream 100 bases:
>100_bases TTAGGAGGAGGAGCTTAAAGCGACACACTACAAAGCGCGGGCGAGCCACGGATAAACAGCTAGGCGGTGTCTGTGTTACC GGTTTGATTGAAATACGTAG
Product: hypothetical protein
Products: NA
Alternate protein names: Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Beta-Lactamase-Like; Beta-Lactamase-Like Protein; Metallo-Beta-Lactamase Superfamily Protein; Zn-Dependent Hydrolase; Beta Lactamase; Metallo-Beta-Lactamase Superfamily; Metallo-Beta-Lactamase Domain Protein; Zinc Metallohydrolase; Metallo-Beta-Lactamase; Beta-Lactamase Class B; Zinc Metallohydrolase Glyoxalase II Family; Metal-Dependent Hydrolase; Zn-Dependent Hydrolase Glyoxylase; Metallo-Dependent Enzymatic Protein; AMP-Dependent Synthetase And Ligase; Metal Dependent Hydrolase; Metallo-Hydrolase/Oxidoreductase Superfamily Protein; Zn-Dependent Hydrolase Including Glyoxylase-Like Protein
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MSLDYPFTELPLAGQRFKVAEGVFWLRFPLPFALDHINLWLLEDTHGWVILDTGLGVRRSREIWQQLLAEQLDGKPVTRV IVTHYHPDHLGMAGWLEQHCGVPVTMSHGEWQLADSICTASDAQTIERFKAFLASHGLLGDDLNKVAGKGNGFRRVVMPL PKSPDFIGEGDLLLINGEPWQVYIGRGHSPEHLCLYREKDHVLLSGDQVLPTISSNLMVRPTEPEANPVMAFVDSLTVIR DALPKDTLVLPAHGLPFRGLHARINALVDHHSQQLEQVLVACGQQPHNAHDMLPVMFKRELDVQQMMFAMGESIAHLNCL LEQGKVQREERNGIWYFAA
Sequences:
>Translated_339_residues MSLDYPFTELPLAGQRFKVAEGVFWLRFPLPFALDHINLWLLEDTHGWVILDTGLGVRRSREIWQQLLAEQLDGKPVTRV IVTHYHPDHLGMAGWLEQHCGVPVTMSHGEWQLADSICTASDAQTIERFKAFLASHGLLGDDLNKVAGKGNGFRRVVMPL PKSPDFIGEGDLLLINGEPWQVYIGRGHSPEHLCLYREKDHVLLSGDQVLPTISSNLMVRPTEPEANPVMAFVDSLTVIR DALPKDTLVLPAHGLPFRGLHARINALVDHHSQQLEQVLVACGQQPHNAHDMLPVMFKRELDVQQMMFAMGESIAHLNCL LEQGKVQREERNGIWYFAA >Mature_338_residues SLDYPFTELPLAGQRFKVAEGVFWLRFPLPFALDHINLWLLEDTHGWVILDTGLGVRRSREIWQQLLAEQLDGKPVTRVI VTHYHPDHLGMAGWLEQHCGVPVTMSHGEWQLADSICTASDAQTIERFKAFLASHGLLGDDLNKVAGKGNGFRRVVMPLP KSPDFIGEGDLLLINGEPWQVYIGRGHSPEHLCLYREKDHVLLSGDQVLPTISSNLMVRPTEPEANPVMAFVDSLTVIRD ALPKDTLVLPAHGLPFRGLHARINALVDHHSQQLEQVLVACGQQPHNAHDMLPVMFKRELDVQQMMFAMGESIAHLNCLL EQGKVQREERNGIWYFAA
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38137; Mature: 38006
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLDYPFTELPLAGQRFKVAEGVFWLRFPLPFALDHINLWLLEDTHGWVILDTGLGVRRS CCCCCCCCCCCCCCCCEECCCCEEEEEECCCCEECCEEEEEEECCCCEEEEECCCCCHHH REIWQQLLAEQLDGKPVTRVIVTHYHPDHLGMAGWLEQHCGVPVTMSHGEWQLADSICTA HHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHCCCCEEECCCCEEEHHHHHCC SDAQTIERFKAFLASHGLLGDDLNKVAGKGNGFRRVVMPLPKSPDFIGEGDLLLINGEPW CCHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEEEECCCCCCCCCCCCEEEECCCCE QVYIGRGHSPEHLCLYREKDHVLLSGDQVLPTISSNLMVRPTEPEANPVMAFVDSLTVIR EEEEECCCCCCEEEEEECCCCEEEECCEECCCCCCCEEEECCCCCCCHHHHHHHHHHHHH DALPKDTLVLPAHGLPFRGLHARINALVDHHSQQLEQVLVACGQQPHNAHDMLPVMFKRE HCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHC LDVQQMMFAMGESIAHLNCLLEQGKVQREERNGIWYFAA CCHHHHHHHHCCHHHHHHHHHHHCCCHHHHCCCEEEEEC >Mature Secondary Structure SLDYPFTELPLAGQRFKVAEGVFWLRFPLPFALDHINLWLLEDTHGWVILDTGLGVRRS CCCCCCCCCCCCCCCEECCCCEEEEEECCCCEECCEEEEEEECCCCEEEEECCCCCHHH REIWQQLLAEQLDGKPVTRVIVTHYHPDHLGMAGWLEQHCGVPVTMSHGEWQLADSICTA HHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHCCCCEEECCCCEEEHHHHHCC SDAQTIERFKAFLASHGLLGDDLNKVAGKGNGFRRVVMPLPKSPDFIGEGDLLLINGEPW CCHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEEEECCCCCCCCCCCCEEEECCCCE QVYIGRGHSPEHLCLYREKDHVLLSGDQVLPTISSNLMVRPTEPEANPVMAFVDSLTVIR EEEEECCCCCCEEEEEECCCCEEEECCEECCCCCCCEEEECCCCCCCHHHHHHHHHHHHH DALPKDTLVLPAHGLPFRGLHARINALVDHHSQQLEQVLVACGQQPHNAHDMLPVMFKRE HCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHC LDVQQMMFAMGESIAHLNCLLEQGKVQREERNGIWYFAA CCHHHHHHHHCCHHHHHHHHHHHCCCHHHHCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA