| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110833836
Identifier: 110833836
GI number: 110833836
Start: 1101239
End: 1101559
Strand: Direct
Name: 110833836
Synonym: ABO_0975
Alternate gene names: NA
Gene position: 1101239-1101559 (Clockwise)
Preceding gene: 110833835
Following gene: 110833838
Centisome position: 35.29
GC content: 53.27
Gene sequence:
>321_bases ATGTCAGTTACATGGATTGTCGCGTCGGCACTACTCAGTTCTTTTTGTACTCTGCTGGTTGTCGGTGTATGGGCGAATTT TTATTTTCAGCCCCGTTTACGTGACAGCTTGCAACGGGAGCTGGATGAGCAGGTGGAAAAAGCGGCGCAGGTTCTTTCGG ATCGAGTGGAAGACGGGGTTCGACGAGGGCTGGCGGAAGGCGTGCGTAACTTGCCGTCTAAAGAGTTACTGGAAGGCGCT AGTCGTAACTTGGCACGTAGCAGTGCGGAAATGGTGGGTGAGCGCCTGGGGAATATTTTCGGACGCAAGGACAAACCCTG A
Upstream 100 bases:
>100_bases ATACTCTTATACAGCGCAACTTAACAATAATGCCGGCCCCCTTATACACGTGGTTGCTTTAGGCCGGGGCCTGAATCGGG ACCACGCAGAGGAAGAAATC
Downstream 100 bases:
>100_bases CCCGTACTTGGTTCGCTATGCCTATGTTTTATAATGTCCGGCTTTTAAGGGAGCCGTTTAGGAAGTAACCGGACCACCAA GCAGGCAATGCCAAGGCTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MSVTWIVASALLSSFCTLLVVGVWANFYFQPRLRDSLQRELDEQVEKAAQVLSDRVEDGVRRGLAEGVRNLPSKELLEGA SRNLARSSAEMVGERLGNIFGRKDKP
Sequences:
>Translated_106_residues MSVTWIVASALLSSFCTLLVVGVWANFYFQPRLRDSLQRELDEQVEKAAQVLSDRVEDGVRRGLAEGVRNLPSKELLEGA SRNLARSSAEMVGERLGNIFGRKDKP >Mature_105_residues SVTWIVASALLSSFCTLLVVGVWANFYFQPRLRDSLQRELDEQVEKAAQVLSDRVEDGVRRGLAEGVRNLPSKELLEGAS RNLARSSAEMVGERLGNIFGRKDKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11807; Mature: 11675
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVTWIVASALLSSFCTLLVVGVWANFYFQPRLRDSLQRELDEQVEKAAQVLSDRVEDGV CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRGLAEGVRNLPSKELLEGASRNLARSSAEMVGERLGNIFGRKDKP HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SVTWIVASALLSSFCTLLVVGVWANFYFQPRLRDSLQRELDEQVEKAAQVLSDRVEDGV CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRGLAEGVRNLPSKELLEGASRNLARSSAEMVGERLGNIFGRKDKP HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA