| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is apsK [H]
Identifier: 110833791
GI number: 110833791
Start: 1041962
End: 1042579
Strand: Direct
Name: apsK [H]
Synonym: ABO_0930
Alternate gene names: 110833791
Gene position: 1041962-1042579 (Clockwise)
Preceding gene: 110833790
Following gene: 110833792
Centisome position: 33.39
GC content: 53.72
Gene sequence:
>618_bases ATGTCTGAGAAGTCTCCGTACCAGGAAAAAGCGAACGACTCCAAAGCCCACGTGGTTTGGCATGAATCGAATGTATCGAA GGCCGACCGCGCCAAGGTTAAGGGGCAAAAGCCTAAGTGTATCTGGCTGACCGGGTTGTCTGGCTCTGGCAAATCCACGC TGGCCAATGCGTTGGAAGTGGCGCTGACCGAGAAGGGTAATCACACCTACTTGTTAGACGGTGACAATGTTCGCCATGGC TTGAACAAGAACCTGGGCATGAGCGATGAAGACCGTACCGAGAATATCCGTCGGGTGTCTGAAGTGGCTAAGTTGATGGT AGATGCGGGCTTGATTGTGGTGACGGCGTTTATCAGCCCGTTTCGTGCAGACCGTGATGCGGCCCGTGCATTGTTTGACG ACGGTGAGTTTGTGGAAGTGTTTGTGGATGCGCCGCTGGAAGAGTGCGAGAAGCGCGACCCCAAAGGCCTGTACCAGAAA GCGCGCCAGGGCATCATTAAGGAATTTACCGGTATCGACAGCCCTTACGAAGCCCCGAGCAAGCCGGAGCTTGTGGTGAA TACCGCTGAAAACGACATTGAAGCCTGTGTTAAGCAGTTGATTGCGGCCATTGTGTAA
Upstream 100 bases:
>100_bases CTGGCGGCTATGATCGAGGGCATACAGCATGGCTGAGCCCGGAAGTTGAGGGTTGTTCTTCTCAACTTTTAACGTGAACG TTCAATTGAAGGAATATTGC
Downstream 100 bases:
>100_bases GGGCTAGCTGATTGCGCAGAACGGATTAAGCATAACCGTAATGCGGTATTGTGCGGTGATCGGATTTGCCCCGGGCCAAG GAGGGCCTGCCTCGACATTG
Product: adenylylsulfate kinase
Products: NA
Alternate protein names: APS kinase; ATP adenosine-5'-phosphosulfate 3'-phosphotransferase; Adenosine-5'-phosphosulfate kinase [H]
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MSEKSPYQEKANDSKAHVVWHESNVSKADRAKVKGQKPKCIWLTGLSGSGKSTLANALEVALTEKGNHTYLLDGDNVRHG LNKNLGMSDEDRTENIRRVSEVAKLMVDAGLIVVTAFISPFRADRDAARALFDDGEFVEVFVDAPLEECEKRDPKGLYQK ARQGIIKEFTGIDSPYEAPSKPELVVNTAENDIEACVKQLIAAIV
Sequences:
>Translated_205_residues MSEKSPYQEKANDSKAHVVWHESNVSKADRAKVKGQKPKCIWLTGLSGSGKSTLANALEVALTEKGNHTYLLDGDNVRHG LNKNLGMSDEDRTENIRRVSEVAKLMVDAGLIVVTAFISPFRADRDAARALFDDGEFVEVFVDAPLEECEKRDPKGLYQK ARQGIIKEFTGIDSPYEAPSKPELVVNTAENDIEACVKQLIAAIV >Mature_204_residues SEKSPYQEKANDSKAHVVWHESNVSKADRAKVKGQKPKCIWLTGLSGSGKSTLANALEVALTEKGNHTYLLDGDNVRHGL NKNLGMSDEDRTENIRRVSEVAKLMVDAGLIVVTAFISPFRADRDAARALFDDGEFVEVFVDAPLEECEKRDPKGLYQKA RQGIIKEFTGIDSPYEAPSKPELVVNTAENDIEACVKQLIAAIV
Specific function: Catalyzes the synthesis of activated sulfate [H]
COG id: COG0529
COG function: function code P; Adenylylsulfate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the APS kinase family [H]
Homologues:
Organism=Homo sapiens, GI46094058, Length=192, Percent_Identity=53.125, Blast_Score=202, Evalue=2e-52, Organism=Homo sapiens, GI34447231, Length=201, Percent_Identity=51.2437810945274, Blast_Score=196, Evalue=9e-51, Organism=Homo sapiens, GI62912492, Length=201, Percent_Identity=51.2437810945274, Blast_Score=196, Evalue=9e-51, Organism=Escherichia coli, GI1789107, Length=184, Percent_Identity=58.695652173913, Blast_Score=215, Evalue=2e-57, Organism=Caenorhabditis elegans, GI17542422, Length=204, Percent_Identity=46.5686274509804, Blast_Score=188, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6322852, Length=183, Percent_Identity=55.1912568306011, Blast_Score=211, Evalue=6e-56, Organism=Drosophila melanogaster, GI24667040, Length=209, Percent_Identity=46.4114832535885, Blast_Score=187, Evalue=3e-48, Organism=Drosophila melanogaster, GI24667032, Length=195, Percent_Identity=47.6923076923077, Blast_Score=187, Evalue=4e-48, Organism=Drosophila melanogaster, GI24667028, Length=195, Percent_Identity=47.6923076923077, Blast_Score=187, Evalue=4e-48, Organism=Drosophila melanogaster, GI24667036, Length=195, Percent_Identity=47.6923076923077, Blast_Score=187, Evalue=4e-48, Organism=Drosophila melanogaster, GI116007838, Length=195, Percent_Identity=47.6923076923077, Blast_Score=187, Evalue=5e-48, Organism=Drosophila melanogaster, GI24667044, Length=195, Percent_Identity=47.6923076923077, Blast_Score=187, Evalue=5e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002891 [H]
Pfam domain/function: PF01583 APS_kinase [H]
EC number: =2.7.1.25 [H]
Molecular weight: Translated: 22558; Mature: 22426
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEKSPYQEKANDSKAHVVWHESNVSKADRAKVKGQKPKCIWLTGLSGSGKSTLANALEV CCCCCCCHHHCCCCCEEEEEECCCCCHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHH ALTEKGNHTYLLDGDNVRHGLNKNLGMSDEDRTENIRRVSEVAKLMVDAGLIVVTAFISP HEECCCCEEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FRADRDAARALFDDGEFVEVFVDAPLEECEKRDPKGLYQKARQGIIKEFTGIDSPYEAPS HHCCHHHHHHHHCCCCEEEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC KPELVVNTAENDIEACVKQLIAAIV CCCEEEECCCHHHHHHHHHHHHHHC >Mature Secondary Structure SEKSPYQEKANDSKAHVVWHESNVSKADRAKVKGQKPKCIWLTGLSGSGKSTLANALEV CCCCCCHHHCCCCCEEEEEECCCCCHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHH ALTEKGNHTYLLDGDNVRHGLNKNLGMSDEDRTENIRRVSEVAKLMVDAGLIVVTAFISP HEECCCCEEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FRADRDAARALFDDGEFVEVFVDAPLEECEKRDPKGLYQKARQGIIKEFTGIDSPYEAPS HHCCHHHHHHHHCCCCEEEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC KPELVVNTAENDIEACVKQLIAAIV CCCEEEECCCHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA