Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110833754

Identifier: 110833754

GI number: 110833754

Start: 991797

End: 993131

Strand: Direct

Name: 110833754

Synonym: ABO_0893

Alternate gene names: NA

Gene position: 991797-993131 (Clockwise)

Preceding gene: 110833753

Following gene: 110833755

Centisome position: 31.79

GC content: 55.96

Gene sequence:

>1335_bases
ATGTTGGAGCACCTCAGCAACGGTAGGCTGGCGGGGCTGTTTATGCCGCAGCCGAGAGTGCTCTGGTCGATGTGCGAAGC
GATCATTCTGACCGCCCTGGCGGTTGGTTTGGGCCTCTGGTTACGTTATGACGATCCGTTGACGCTTATCGGAACTTTCC
GTTGGGTGCTGCTAGTGCCTATCCTGTTGGCGCTTCGTTACGGCAGCCTGCTCGGTGTGTTTGGCATGCTGTGCTTGGTC
AGTAGCTGGTTTATTCTCAGGTTTTTCGGCTTTTACCCCAGTTTGCCCTTTCCTGAATCCACCATGCTCGGTGGCTTCGT
TATTATTCTGATCTGCGGCGAGTTTGCCGATATGTGGCGGGTCAAACTGATGCGCGCCGACAGTGCTTCCAGTTATGCGT
TGGAGCGCCTGCAGAATCTTACGCAGCGCTATGTGTTGTTGCGTTTGTCCCATGACCGCCTGGAAGAGAATCTACTCGTT
AAACCCTACACCGTGCGCGATGCGCTGGCGCGGTTGCGCGAGCTGACCTTAGATGAAAGTGACAGCATTCGGCTGCCTGC
AGCGGATGATCTGGTGCATCTTCTGGCAGAGTATTGCCAGCTACAGCGTTGTGCCTTGTACCGCGTTGTTAATGGCCGGA
TTGATGACGAGCCGGCGGCCCTGTTGGGAGAAAATGGCCCCCTGGACCGAGATAACGAACTCCTTCAGCACGCGCTAGAT
CATCGGCTATTGGCCCACGTTCAGCAGCAAGGCCACGACAGCAATTACCATGGCCAATATTTGGTGGCTGCGCCTATCAT
CAACAGCGGTGGAGACCTCATCGGGATGATGGTGATTGAGCGCCTGCCATTCCTCTCGATCAACTATGAAAATCTGCAGT
TGCTGTCTGTGCTGCTGAACTTTTATGCGGATATCGTGCACGCCGGCGATGAAGTGGATGAGATGTTGGATCGCTGGCCG
ACCATGCCCTTCCGTATTGCCAGCGAGCTGGCTGCCTTGGTGCGTTTGCGTGAAGGTGGCCGAGTAGATACTTCCCTGAC
CCTATTTGTGGCCGATGAAAGCGAGCAGGCCGGGCTAATTCTGGATGCTCTGGCGCGTGGCCTGCGTAGCCTCGACTTGG
CATGGTGGATCAGCGATAGGGTACTGATGATCATGATGCCTATGACCGGGGAATCCAGTCTGGAGGGCTATGTTCTGCGT
ACGGAAAAATGGCTGCAAGAGGAGTACGTCTTCATGAGCCTACGCCAGGCGGGCATACAGTTCTTTTACCGGCACCTGGA
CCAGCGAGACCCCGAGGTGCAGATCGCCAGGTTGCTGGAGGCAGCCGGTGTCTAG

Upstream 100 bases:

>100_bases
TTTATAGCGGCACCGGCTCGCGCGCGGGCTGGGCCCGCCAGTCGCTCAGTGAAGTCGGCCAGAAAGTGATCGATAAACTG
ATCTCGCCGGTGGTGCAGTA

Downstream 100 bases:

>100_bases
CCTCAAGCTAATTATTTATGCCGTCGCTGCAGAAATCGCATCGCTAATGCTGTTGTTGAGCAAGCAGGCGGATTTATCGA
TTTTCTTGTTGTATCTGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: Polysaccharide Transporter Component Transmembrane Protein

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MLEHLSNGRLAGLFMPQPRVLWSMCEAIILTALAVGLGLWLRYDDPLTLIGTFRWVLLVPILLALRYGSLLGVFGMLCLV
SSWFILRFFGFYPSLPFPESTMLGGFVIILICGEFADMWRVKLMRADSASSYALERLQNLTQRYVLLRLSHDRLEENLLV
KPYTVRDALARLRELTLDESDSIRLPAADDLVHLLAEYCQLQRCALYRVVNGRIDDEPAALLGENGPLDRDNELLQHALD
HRLLAHVQQQGHDSNYHGQYLVAAPIINSGGDLIGMMVIERLPFLSINYENLQLLSVLLNFYADIVHAGDEVDEMLDRWP
TMPFRIASELAALVRLREGGRVDTSLTLFVADESEQAGLILDALARGLRSLDLAWWISDRVLMIMMPMTGESSLEGYVLR
TEKWLQEEYVFMSLRQAGIQFFYRHLDQRDPEVQIARLLEAAGV

Sequences:

>Translated_444_residues
MLEHLSNGRLAGLFMPQPRVLWSMCEAIILTALAVGLGLWLRYDDPLTLIGTFRWVLLVPILLALRYGSLLGVFGMLCLV
SSWFILRFFGFYPSLPFPESTMLGGFVIILICGEFADMWRVKLMRADSASSYALERLQNLTQRYVLLRLSHDRLEENLLV
KPYTVRDALARLRELTLDESDSIRLPAADDLVHLLAEYCQLQRCALYRVVNGRIDDEPAALLGENGPLDRDNELLQHALD
HRLLAHVQQQGHDSNYHGQYLVAAPIINSGGDLIGMMVIERLPFLSINYENLQLLSVLLNFYADIVHAGDEVDEMLDRWP
TMPFRIASELAALVRLREGGRVDTSLTLFVADESEQAGLILDALARGLRSLDLAWWISDRVLMIMMPMTGESSLEGYVLR
TEKWLQEEYVFMSLRQAGIQFFYRHLDQRDPEVQIARLLEAAGV
>Mature_444_residues
MLEHLSNGRLAGLFMPQPRVLWSMCEAIILTALAVGLGLWLRYDDPLTLIGTFRWVLLVPILLALRYGSLLGVFGMLCLV
SSWFILRFFGFYPSLPFPESTMLGGFVIILICGEFADMWRVKLMRADSASSYALERLQNLTQRYVLLRLSHDRLEENLLV
KPYTVRDALARLRELTLDESDSIRLPAADDLVHLLAEYCQLQRCALYRVVNGRIDDEPAALLGENGPLDRDNELLQHALD
HRLLAHVQQQGHDSNYHGQYLVAAPIINSGGDLIGMMVIERLPFLSINYENLQLLSVLLNFYADIVHAGDEVDEMLDRWP
TMPFRIASELAALVRLREGGRVDTSLTLFVADESEQAGLILDALARGLRSLDLAWWISDRVLMIMMPMTGESSLEGYVLR
TEKWLQEEYVFMSLRQAGIQFFYRHLDQRDPEVQIARLLEAAGV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50481; Mature: 50481

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEHLSNGRLAGLFMPQPRVLWSMCEAIILTALAVGLGLWLRYDDPLTLIGTFRWVLLVP
CCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHH
ILLALRYGSLLGVFGMLCLVSSWFILRFFGFYPSLPFPESTMLGGFVIILICGEFADMWR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
VKLMRADSASSYALERLQNLTQRYVLLRLSHDRLEENLLVKPYTVRDALARLRELTLDES
HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHCCCCC
DSIRLPAADDLVHLLAEYCQLQRCALYRVVNGRIDDEPAALLGENGPLDRDNELLQHALD
CCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCHHHHHHHHHH
HRLLAHVQQQGHDSNYHGQYLVAAPIINSGGDLIGMMVIERLPFLSINYENLQLLSVLLN
HHHHHHHHHCCCCCCCCCCEEEEECEECCCCHHHHHHHHHHCCCEEECCCHHHHHHHHHH
FYADIVHAGDEVDEMLDRWPTMPFRIASELAALVRLREGGRVDTSLTLFVADESEQAGLI
HHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHH
LDALARGLRSLDLAWWISDRVLMIMMPMTGESSLEGYVLRTEKWLQEEYVFMSLRQAGIQ
HHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHH
FFYRHLDQRDPEVQIARLLEAAGV
HHHHHHCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MLEHLSNGRLAGLFMPQPRVLWSMCEAIILTALAVGLGLWLRYDDPLTLIGTFRWVLLVP
CCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHH
ILLALRYGSLLGVFGMLCLVSSWFILRFFGFYPSLPFPESTMLGGFVIILICGEFADMWR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
VKLMRADSASSYALERLQNLTQRYVLLRLSHDRLEENLLVKPYTVRDALARLRELTLDES
HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHCCCCC
DSIRLPAADDLVHLLAEYCQLQRCALYRVVNGRIDDEPAALLGENGPLDRDNELLQHALD
CCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCHHHHHHHHHH
HRLLAHVQQQGHDSNYHGQYLVAAPIINSGGDLIGMMVIERLPFLSINYENLQLLSVLLN
HHHHHHHHHCCCCCCCCCCEEEEECEECCCCHHHHHHHHHHCCCEEECCCHHHHHHHHHH
FYADIVHAGDEVDEMLDRWPTMPFRIASELAALVRLREGGRVDTSLTLFVADESEQAGLI
HHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHH
LDALARGLRSLDLAWWISDRVLMIMMPMTGESSLEGYVLRTEKWLQEEYVFMSLRQAGIQ
HHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHH
FFYRHLDQRDPEVQIARLLEAAGV
HHHHHHCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA