| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is gpmA
Identifier: 110833738
GI number: 110833738
Start: 972953
End: 973624
Strand: Direct
Name: gpmA
Synonym: ABO_0877
Alternate gene names: NA
Gene position: 972953-973624 (Clockwise)
Preceding gene: 110833736
Following gene: 110833739
Centisome position: 31.18
GC content: 58.78
Gene sequence:
>672_bases ATGGCGCGCCTACACCCGCGATTGCTGGAAGCCCTCAACCTGTTGCCGCAGGACAAACCCGTTCATTTGCTGACGCGCCA CTCCGTGCGTGAATTGGCCAAAAACGGTTTTGCGGACTATCGGTTGCCTCTGACGCCGGAAGGCATTGATATGGCGCGCG AATGGGGTGGCCGGTTGGCGCGCCCGGTGGATGCGTTCTTTTCGAGTCCGGTGGGGCGTTGTGTGAACACCGCTAAAGCC ATGGCTGAAGGTGCTCGCAAAGCTGGGCTGCTTGAGGCGATTCCCGAGATCACCACAGATACCACTTTGGTGGAGCCGGG CTGCTATGTAGAAGACCTAAATCAGGTTGGCCCTACGTTCTTGAAAATGGGCGCGTTTAAATTCATTAATCGGCACCTGC AGCAACCCTTCGATGGCATGCTGTCGCCGGCAGAGGGACGCGCAAAGCTGGCGCGTTATCTAGGCGAGCGTGAACCGGCG CCCGGCCACCTTAATGTGCACGTGACCCATGACACCATTCTTGCTGTGCTGGTGGCGGAGCTGCACGGGCATCGGCGTAT TACCGAAGACGACTGGCCCTGGATGATGGAAGGTCTGTGGCTGTGGTTCAGTGGAGGCCAACTTCACTGGGTGTGGCGTG GTGATCACGGACACCGTGCGTTGGGTAACTGA
Upstream 100 bases:
>100_bases CTTCTTCGCTGACTTGCCCGTGTATTGCGAAATTCATTCTCATGATTTGCTTTCGCTACGGCGCTCCGTACACTAAGGCT TCACCGAAAGTGAAGAGACT
Downstream 100 bases:
>100_bases CCACGCTGACAGCCTTTTTCTCCGTTTACCGATTTCTCATGAGGTGTGCCTTGTCCGCACTGACAATTCGCAATTTGACC AAAACCTATGCCAATGGCGT
Product: phosphoglycerate mutase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MARLHPRLLEALNLLPQDKPVHLLTRHSVRELAKNGFADYRLPLTPEGIDMAREWGGRLARPVDAFFSSPVGRCVNTAKA MAEGARKAGLLEAIPEITTDTTLVEPGCYVEDLNQVGPTFLKMGAFKFINRHLQQPFDGMLSPAEGRAKLARYLGEREPA PGHLNVHVTHDTILAVLVAELHGHRRITEDDWPWMMEGLWLWFSGGQLHWVWRGDHGHRALGN
Sequences:
>Translated_223_residues MARLHPRLLEALNLLPQDKPVHLLTRHSVRELAKNGFADYRLPLTPEGIDMAREWGGRLARPVDAFFSSPVGRCVNTAKA MAEGARKAGLLEAIPEITTDTTLVEPGCYVEDLNQVGPTFLKMGAFKFINRHLQQPFDGMLSPAEGRAKLARYLGEREPA PGHLNVHVTHDTILAVLVAELHGHRRITEDDWPWMMEGLWLWFSGGQLHWVWRGDHGHRALGN >Mature_222_residues ARLHPRLLEALNLLPQDKPVHLLTRHSVRELAKNGFADYRLPLTPEGIDMAREWGGRLARPVDAFFSSPVGRCVNTAKAM AEGARKAGLLEAIPEITTDTTLVEPGCYVEDLNQVGPTFLKMGAFKFINRHLQQPFDGMLSPAEGRAKLARYLGEREPAP GHLNVHVTHDTILAVLVAELHGHRRITEDDWPWMMEGLWLWFSGGQLHWVWRGDHGHRALGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25054; Mature: 24923
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARLHPRLLEALNLLPQDKPVHLLTRHSVRELAKNGFADYRLPLTPEGIDMAREWGGRLA CCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHH RPVDAFFSSPVGRCVNTAKAMAEGARKAGLLEAIPEITTDTTLVEPGCYVEDLNQVGPTF HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHCHHH LKMGAFKFINRHLQQPFDGMLSPAEGRAKLARYLGEREPAPGHLNVHVTHDTILAVLVAE HHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEHHHHHHHHHHH LHGHRRITEDDWPWMMEGLWLWFSGGQLHWVWRGDHGHRALGN HHCCCCCCCCCCHHHHHHEEEEEECCEEEEEEECCCCCCCCCC >Mature Secondary Structure ARLHPRLLEALNLLPQDKPVHLLTRHSVRELAKNGFADYRLPLTPEGIDMAREWGGRLA CCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCHHH RPVDAFFSSPVGRCVNTAKAMAEGARKAGLLEAIPEITTDTTLVEPGCYVEDLNQVGPTF HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHCHHH LKMGAFKFINRHLQQPFDGMLSPAEGRAKLARYLGEREPAPGHLNVHVTHDTILAVLVAE HHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEHHHHHHHHHHH LHGHRRITEDDWPWMMEGLWLWFSGGQLHWVWRGDHGHRALGN HHCCCCCCCCCCHHHHHHEEEEEECCEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA