Click here to switch to the map view.

The map label for this gene is nasT [H]

Identifier: 110833720

GI number: 110833720

Start: 957040

End: 957690

Strand: Direct

Name: nasT [H]

Synonym: ABO_0859

Alternate gene names: 110833720

Gene position: 957040-957690 (Clockwise)

Preceding gene: 110833719

Following gene: 110833721

Centisome position: 30.67

GC content: 58.83

Gene sequence:

>651_bases
ATGACTGGCACAACCGTTGCAGAACACTTCAATAATTCCATTTGTTCGGATGCGCCAGACATTATGGCTCTGACAATTAT
GCTGGTAGATGACCAGCCCCCCCGCGCGGCGATCCTCGAGCGGGCCCTCATTGATGAGGGCCACAAGATTCTGTGCCGGC
TCACCAGCGCTGCCGGCCTTGCCGAGAAAGTGCGCTCCAGTAACCCGGATGTGGTGATTGTGGACATGGATGCGCCGGAC
CGCGATACCCTGGAAAGCATGGCGTTGGTGCAGCGTGACATGCCACGCCCCATGGTCATGTTTTGCCATCAGGACGATGA
GGATCTGGTGGTTGCCGCATTGCGCGCGGGTGTTAGCGCCTACGTGGCCGGCGAAACAGACCTGACCCGGGTGCGTGGGG
TAATGCGTGTGGCGACCGCGCGTTTTCGGGAATATCAGGCGTTACGTGAAGAGCTGGAAGAAACCCGTGAAGCGTTGGCC
GAACGCAAAATTATCGAGCGGGCTAAAGGGCTGCTGATGCAGCGTCGTCGGCTTAACGAACAGGATGCCTACAGCACCCT
GCGTCGCCAGGCCATGAACAGCGGGCAACCGTTGATTCAGGTGGCCCGATCGGTGCTCGATTATGCCGAAATGCTCAAGG
CGCAAGGGTAG

Upstream 100 bases:

>100_bases
GGCCATTTTGGCACCTGGATTTGCACCACAATGGCTCGCTTTTGGGGTGCCTTATTCATGGAAAATAAAATAGACCATAA
AACAATGGGTTAGAAAGAGT

Downstream 100 bases:

>100_bases
AAAGACTAGCGCTTAATGCCCAAAGGATAATGTTGAACAGGAGATAGCATGCGACGAGTGATGCCCTTGATGAAGGCGCG
AAGCCTTATGGATATGTCGG

Product: nitrogen assimilation response regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MTGTTVAEHFNNSICSDAPDIMALTIMLVDDQPPRAAILERALIDEGHKILCRLTSAAGLAEKVRSSNPDVVIVDMDAPD
RDTLESMALVQRDMPRPMVMFCHQDDEDLVVAALRAGVSAYVAGETDLTRVRGVMRVATARFREYQALREELEETREALA
ERKIIERAKGLLMQRRRLNEQDAYSTLRRQAMNSGQPLIQVARSVLDYAEMLKAQG

Sequences:

>Translated_216_residues
MTGTTVAEHFNNSICSDAPDIMALTIMLVDDQPPRAAILERALIDEGHKILCRLTSAAGLAEKVRSSNPDVVIVDMDAPD
RDTLESMALVQRDMPRPMVMFCHQDDEDLVVAALRAGVSAYVAGETDLTRVRGVMRVATARFREYQALREELEETREALA
ERKIIERAKGLLMQRRRLNEQDAYSTLRRQAMNSGQPLIQVARSVLDYAEMLKAQG
>Mature_215_residues
TGTTVAEHFNNSICSDAPDIMALTIMLVDDQPPRAAILERALIDEGHKILCRLTSAAGLAEKVRSSNPDVVIVDMDAPDR
DTLESMALVQRDMPRPMVMFCHQDDEDLVVAALRAGVSAYVAGETDLTRVRGVMRVATARFREYQALREELEETREALAE
RKIIERAKGLLMQRRRLNEQDAYSTLRRQAMNSGQPLIQVARSVLDYAEMLKAQG

Specific function: Member of the two-component regulatory system pdtaR/pdtaS [H]

COG id: COG3707

COG function: function code T; Response regulator with putative antiterminator output domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005561
- InterPro:   IPR011006
- InterPro:   IPR008327
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03861 ANTAR; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 24143; Mature: 24012

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: PS50921 ANTAR ; PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGTTVAEHFNNSICSDAPDIMALTIMLVDDQPPRAAILERALIDEGHKILCRLTSAAGL
CCCCHHHHHHCCHHCCCCCHHHHEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
AEKVRSSNPDVVIVDMDAPDRDTLESMALVQRDMPRPMVMFCHQDDEDLVVAALRAGVSA
HHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCHHH
YVAGETDLTRVRGVMRVATARFREYQALREELEETREALAERKIIERAKGLLMQRRRLNE
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
QDAYSTLRRQAMNSGQPLIQVARSVLDYAEMLKAQG
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TGTTVAEHFNNSICSDAPDIMALTIMLVDDQPPRAAILERALIDEGHKILCRLTSAAGL
CCCHHHHHHCCHHCCCCCHHHHEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
AEKVRSSNPDVVIVDMDAPDRDTLESMALVQRDMPRPMVMFCHQDDEDLVVAALRAGVSA
HHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCHHH
YVAGETDLTRVRGVMRVATARFREYQALREELEETREALAERKIIERAKGLLMQRRRLNE
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
QDAYSTLRRQAMNSGQPLIQVARSVLDYAEMLKAQG
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]