Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

Click here to switch to the map view.

The map label for this gene is 110833677

Identifier: 110833677

GI number: 110833677

Start: 911043

End: 911357

Strand: Direct

Name: 110833677

Synonym: ABO_0816

Alternate gene names: NA

Gene position: 911043-911357 (Clockwise)

Preceding gene: 110833676

Following gene: 110833679

Centisome position: 29.2

GC content: 54.92

Gene sequence:

>315_bases
ATGACGTATGTGCGTGAGTATGAGGATGAGAGCATTACCCGCGAGCAGCTGGATGAGAGTGCCGGGCTGAGGGTTATTGA
GTTTGGCGCCAATTGGTGTGGCTACTGCATTGCCGCACAACCGGATATCGAAGCGGCGCTAGCGGAACACCCTGAGCTCA
AGCATGAAAAGATAGCAGACGGGCCGGGTAGGCCCCTGGGCCGCAGTTTCCGTGTGAAGTTATGGCCAACATTGATAGCG
ATTCGTGATGGTGAGGAAATAAACCGGGTGGTGCGGCCAGAGAGTGCTGATCAGGTTCGCCAACTTTTCTTGTAG

Upstream 100 bases:

>100_bases
GGGTTCTCTGGCCGCGAAATCATGACAGAGAAATTATCTAAGCATAAGATTGGCCGGTATCTCTCCTGCGGCATAGCCGT
CTAGAGAGTTGGAGAAAGTG

Downstream 100 bases:

>100_bases
CGCTTTCCCCGGGGATTGCGTATGAGCTATTGAGGCACTTCAAGAACCACCTTGCCCACGGATTGACCCGATTGCAGTAG
TGCTAAGGCGGCATGGGCAT

Product: thioredoxin

Products: NA

Alternate protein names: Thioredoxin Domain-Containing Protein; Thioredoxin Domain Protein; Thioredoxin Domain; Thioredoxin-Disulfide Reductase; Thioredoxin Related Protein; Thioredoxin-Related; Thiol-Disulfide Isomerase/Thioredoxin; Thiol-Disulfide Isomerase And Thioredoxins

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MTYVREYEDESITREQLDESAGLRVIEFGANWCGYCIAAQPDIEAALAEHPELKHEKIADGPGRPLGRSFRVKLWPTLIA
IRDGEEINRVVRPESADQVRQLFL

Sequences:

>Translated_104_residues
MTYVREYEDESITREQLDESAGLRVIEFGANWCGYCIAAQPDIEAALAEHPELKHEKIADGPGRPLGRSFRVKLWPTLIA
IRDGEEINRVVRPESADQVRQLFL
>Mature_103_residues
TYVREYEDESITREQLDESAGLRVIEFGANWCGYCIAAQPDIEAALAEHPELKHEKIADGPGRPLGRSFRVKLWPTLIAI
RDGEEINRVVRPESADQVRQLFL

Specific function: Unknown

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11853; Mature: 11721

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYVREYEDESITREQLDESAGLRVIEFGANWCGYCIAAQPDIEAALAEHPELKHEKIAD
CCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCEEEECCCCHHHHHHCCCCCCCCCCCC
GPGRPLGRSFRVKLWPTLIAIRDGEEINRVVRPESADQVRQLFL
CCCCCCCCCEEEEECEEEEEEECCHHHHHHCCCCCHHHHHHHCC
>Mature Secondary Structure 
TYVREYEDESITREQLDESAGLRVIEFGANWCGYCIAAQPDIEAALAEHPELKHEKIAD
CCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCEEEECCCCHHHHHHCCCCCCCCCCCC
GPGRPLGRSFRVKLWPTLIAIRDGEEINRVVRPESADQVRQLFL
CCCCCCCCCEEEEECEEEEEEECCHHHHHHCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA