| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
Click here to switch to the map view.
The map label for this gene is 110833675
Identifier: 110833675
GI number: 110833675
Start: 908399
End: 909103
Strand: Direct
Name: 110833675
Synonym: ABO_0814
Alternate gene names: NA
Gene position: 908399-909103 (Clockwise)
Preceding gene: 110833674
Following gene: 110833676
Centisome position: 29.11
GC content: 55.04
Gene sequence:
>705_bases ATGTTAGAGAGGCGAAAAAGAAGATTTGAGATTATGCCAATAGAACAGGAAAGAGTAGGGCTTAAGGCCCTGCATGAACG GCTGCATCGTGTGCTGCCGACGGTGTCTTTGTCGTGCCAGCCTTTGCCGCAAACACCGGCCCTGCGCCTGTGGTTGCTCG ATGAGTTGTTCCCTGAGCAAGCTCTGGCTCCAGAGATTGTTAATGCAATTATGGAAGAGCCCCCGTATTGGTCGTTCTGC TGGGCTTCGGGCCAGGTACTGGCGCGATATCTACTGGATAACCCCAGTTGTGTAGCTGGACGCTGTGTGGTGGACGTCGG CCCGGGTTCAGGGGTGGTTGCGATTGCCGCCGCCATGGCTGGGGCGCGTAAGGTGATTGCCTGTGATTTGGATGAGGATG CGCTCACTGCCACGGCCATGAACGCCCGGGAAAACGGTGTTGATGTGAGCTTGAGTAATGATCTCAGTGCGGCCCTACAA GAAGCAGATTTAACCACCGCCGCTGATATCCTTTATGACCGAGATAATCTGCCGTTACTGGCCCAGTTGCAGTTGGCCAG TGCGGTGCTGTTGGCGGACTCTCGGGTGCCAGACCTGAACCCGCCAGGTTACCGTTTACTAGGAGAATGGGAATCTTGTA CTTGGCCGGACTTAGGGGAATCGCAAGAGTATAACCACGTTCGTCTGTTTGCTTCGGAACCGTAG
Upstream 100 bases:
>100_bases TTTCGCGTGCGTAGCAGAGGGGGCGCTAGTAACGCTGACGAGCAGCGTAATCAAACCAATTCATCCCTGTCTGACAGTCA TTTTGTGATTCTTTTTAAGG
Downstream 100 bases:
>100_bases CGGATTGTTCTGGTCAGAAAAAAGTGGGTGACCCCCAATCCTTAGTGCCCGCTTTGTGCTACAAGCATTTCTGGGTGTCA TCCGCTACTGCCTTTAGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: Methyltransferase; Methyltransferase Protein; Methyltransferase Type; Methyltransferase Small; C12orf72 Protein
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MLERRKRRFEIMPIEQERVGLKALHERLHRVLPTVSLSCQPLPQTPALRLWLLDELFPEQALAPEIVNAIMEEPPYWSFC WASGQVLARYLLDNPSCVAGRCVVDVGPGSGVVAIAAAMAGARKVIACDLDEDALTATAMNARENGVDVSLSNDLSAALQ EADLTTAADILYDRDNLPLLAQLQLASAVLLADSRVPDLNPPGYRLLGEWESCTWPDLGESQEYNHVRLFASEP
Sequences:
>Translated_234_residues MLERRKRRFEIMPIEQERVGLKALHERLHRVLPTVSLSCQPLPQTPALRLWLLDELFPEQALAPEIVNAIMEEPPYWSFC WASGQVLARYLLDNPSCVAGRCVVDVGPGSGVVAIAAAMAGARKVIACDLDEDALTATAMNARENGVDVSLSNDLSAALQ EADLTTAADILYDRDNLPLLAQLQLASAVLLADSRVPDLNPPGYRLLGEWESCTWPDLGESQEYNHVRLFASEP >Mature_234_residues MLERRKRRFEIMPIEQERVGLKALHERLHRVLPTVSLSCQPLPQTPALRLWLLDELFPEQALAPEIVNAIMEEPPYWSFC WASGQVLARYLLDNPSCVAGRCVVDVGPGSGVVAIAAAMAGARKVIACDLDEDALTATAMNARENGVDVSLSNDLSAALQ EADLTTAADILYDRDNLPLLAQLQLASAVLLADSRVPDLNPPGYRLLGEWESCTWPDLGESQEYNHVRLFASEP
Specific function: Unknown
COG id: COG3897
COG function: function code R; Predicted methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI209529731, Length=104, Percent_Identity=42.3076923076923, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI209529729, Length=104, Percent_Identity=42.3076923076923, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI28603834, Length=104, Percent_Identity=42.3076923076923, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI115533699, Length=73, Percent_Identity=42.4657534246575, Blast_Score=75, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25745; Mature: 25745
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLERRKRRFEIMPIEQERVGLKALHERLHRVLPTVSLSCQPLPQTPALRLWLLDELFPEQ CCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCHH ALAPEIVNAIMEEPPYWSFCWASGQVLARYLLDNPSCVAGRCVVDVGPGSGVVAIAAAMA CCCHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCCEECEEEEEECCCCCHHHHHHHHH GARKVIACDLDEDALTATAMNARENGVDVSLSNDLSAALQEADLTTAADILYDRDNLPLL CCCEEEEEECCCHHHHHHHHCCCCCCEEEEECCHHHHHHHHHCCHHHHHHEECCCCCCCE AQLQLASAVLLADSRVPDLNPPGYRLLGEWESCTWPDLGESQEYNHVRLFASEP EHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEECCC >Mature Secondary Structure MLERRKRRFEIMPIEQERVGLKALHERLHRVLPTVSLSCQPLPQTPALRLWLLDELFPEQ CCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCHH ALAPEIVNAIMEEPPYWSFCWASGQVLARYLLDNPSCVAGRCVVDVGPGSGVVAIAAAMA CCCHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCCEECEEEEEECCCCCHHHHHHHHH GARKVIACDLDEDALTATAMNARENGVDVSLSNDLSAALQEADLTTAADILYDRDNLPLL CCCEEEEEECCCHHHHHHHHCCCCCCEEEEECCHHHHHHHHHCCHHHHHHEECCCCCCCE AQLQLASAVLLADSRVPDLNPPGYRLLGEWESCTWPDLGESQEYNHVRLFASEP EHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA