| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110833672
Identifier: 110833672
GI number: 110833672
Start: 905161
End: 905634
Strand: Direct
Name: 110833672
Synonym: ABO_0811
Alternate gene names: NA
Gene position: 905161-905634 (Clockwise)
Preceding gene: 110833671
Following gene: 110833674
Centisome position: 29.01
GC content: 56.54
Gene sequence:
>474_bases ATGACGGCGGTTGGATATTTTCGGCCCGGTGAATCGTCGGCCAAGGATAGTGAGCTGCCGGATCTGGATTGTCGGGAAAA TATTGATGCCATGGTCCACGGGTTTTATCAGCGCTTGCTGAATGATCCAGTCATGGCGCCGGTATTTTTGGCGGTGGCGG GTATCGACCTGCAGCAGCACCTGCCGACCATCTGCCAGTACTGGTACAAAATGCTACTCGGTGAACAGGGTTATCAGCGG CACATGATGGCCAAGCATCGGGCGCTGGATGATCGTGAGCCGCTGACCGGGGAGCATCACGAACGGTGGCTGGGGCATTT TATGGCGAACCTGGACGGCAACTTTCACGGGCCGATGACTGACCGTGCTCGCTTGATTGCCCAGCGCGTCATGAATAATC TCTATAGCCAGCTCAGTGCCCGCCGGGCCAGCGGCTTCCTAGAACAGGGGAATGATGAAGTTACCCACGAGTAA
Upstream 100 bases:
>100_bases GGTGATTTCGTCATGTTCAAAGATATTCTCACCGGGCGGATTGAGTGGTAGAGGGCGTAACCACAGGCAACAGGCTGGAC GCTCGCCCGAGGAAAGCAGA
Downstream 100 bases:
>100_bases GCTCGCACCACTCAGGTAGCAGCTGGTAATCAAAATTGGATCTGAACCCAGTGCCTCTCGACGCAAATGAAAATACACGC CAGCCCCCAGCAATCCTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: Sec-Independent Protein Translocase Protein TatC; SEC-Independent Protein Translocase Protein TATC
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MTAVGYFRPGESSAKDSELPDLDCRENIDAMVHGFYQRLLNDPVMAPVFLAVAGIDLQQHLPTICQYWYKMLLGEQGYQR HMMAKHRALDDREPLTGEHHERWLGHFMANLDGNFHGPMTDRARLIAQRVMNNLYSQLSARRASGFLEQGNDEVTHE
Sequences:
>Translated_157_residues MTAVGYFRPGESSAKDSELPDLDCRENIDAMVHGFYQRLLNDPVMAPVFLAVAGIDLQQHLPTICQYWYKMLLGEQGYQR HMMAKHRALDDREPLTGEHHERWLGHFMANLDGNFHGPMTDRARLIAQRVMNNLYSQLSARRASGFLEQGNDEVTHE >Mature_156_residues TAVGYFRPGESSAKDSELPDLDCRENIDAMVHGFYQRLLNDPVMAPVFLAVAGIDLQQHLPTICQYWYKMLLGEQGYQRH MMAKHRALDDREPLTGEHHERWLGHFMANLDGNFHGPMTDRARLIAQRVMNNLYSQLSARRASGFLEQGNDEVTHE
Specific function: Unknown
COG id: COG2346
COG function: function code R; Truncated hemoglobins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18029; Mature: 17897
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAVGYFRPGESSAKDSELPDLDCRENIDAMVHGFYQRLLNDPVMAPVFLAVAGIDLQQH CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHH LPTICQYWYKMLLGEQGYQRHMMAKHRALDDREPLTGEHHERWLGHFMANLDGNFHGPMT HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHH DRARLIAQRVMNNLYSQLSARRASGFLEQGNDEVTHE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TAVGYFRPGESSAKDSELPDLDCRENIDAMVHGFYQRLLNDPVMAPVFLAVAGIDLQQH CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHH LPTICQYWYKMLLGEQGYQRHMMAKHRALDDREPLTGEHHERWLGHFMANLDGNFHGPMT HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHH DRARLIAQRVMNNLYSQLSARRASGFLEQGNDEVTHE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA