Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110833628

Identifier: 110833628

GI number: 110833628

Start: 860892

End: 862184

Strand: Direct

Name: 110833628

Synonym: ABO_0767

Alternate gene names: NA

Gene position: 860892-862184 (Clockwise)

Preceding gene: 110833627

Following gene: 110833629

Centisome position: 27.59

GC content: 53.21

Gene sequence:

>1293_bases
ATGAGTCAGCGTATTGCTATTGTTGGAGCCGGTATTAGTGGGCTTAGCACCGCTTGGTATCTGTCAAAAGCGGGTCATCA
GGTCGATGTATTTGAAGCCAATGATTATCTGGGTGGGCATACCTGTACGATTCCGGTATCTCGACCCCATGGTGATTACG
CTATTGATGTAGGGTTTATTGTATTCAACGATCGAACCTACCCGAATTACCTTCGTTTGTTGGAGGAGCTTGGCTTGCAG
GGCCAACCCACTCCTATGGGGTTTGCGGTCAGTGATGAGAAGAACGGGCTGGAATACTGCGGCGATGGGCTGGGGGGCAT
GTTTGCCCAGAAACGCAATTTGCTGAACTTTTCACACTGGCGTTTCATTCGCGACATCTTGCGCTTCAATAAGCAGGCAC
CGGCTTTGCTTAATAGCGCCAAGGGAGATCTTCCTTTGGGGCAGTATCTGCGTGAGCAGGGTTACGGTGAACGCTTTGCC
CGGGATTATATTCTCGCCATGGGTGGGGCTATCTGGTCTTGTTCGCTGGAGCAGATGGAAGTTTTTCCTGCTCGGTTTTT
TATCCGGTTTTTCCAGAATCATGGTTTATTGTCGTTGAATGATCGGCCTCAGTGGTTCGTGGTGCCTGGTGGTTCCAATC
AATACGTGAAACCTCTGGTGGACGGTTGCAACGCTACCTTTCATACCCGCACCCCGGTGCAGTCGATACGACGGGGCTCA
GCGGGAGTGGGCGTAGAGGCTGGTGTCGGTGTCACCGTCACCGTAGGCGGGACAGAGCGGCATTACGATCAGGTTGTGCT
GGCGTGCCACAGCGACCAGGCGCTGGCATTACTCAGTGACCCAGACGAACGGGAAGAAGCGAACCTGTCGCAATTGGGTT
ACCAGGACAATGAAGTGGTCCTGCATACGGATACAGCATTGCTACCGCGTCGGGAACGGGTATGGTCAAGCTGGAATGCC
ATGTTGTATGCGCAGGATCAGGAACGGGTTCAAGTGACCTATAACATGAATATTCTGCAGGGTATTGCTGCCCCGGAAAC
CTTCTGTGTCACGCTGAACGCCAGTGACCGAATTGATACTAAAAAGGTACTCGCCCGTTACCATTTTGCGCATCCGTTAT
TCACACCGCAGACGGTGGCGGCCCGGGAACAATTACTGAAAGACAACGGCAAAAATGCCACCTGGTTTGCCGGTGCCTGG
TGTCGCAATGGTTTCCATGAAGATGGTGTGGTGTCTGCGTTGAACGTGGTGGCAGGGATCACTGGCAAGGCGCAGGAAGG
GGGCGTTGCGTGA

Upstream 100 bases:

>100_bases
TAGCGTTCAAGGCGGCTAAAAGCCGGTTTGATAAAACCTCTTAGGATCAGCAACACCCCGTGTCGCCGCCGGCCATGGGC
AATAGTAGGAAGGGAAAGAC

Downstream 100 bases:

>100_bases
TGGAGGCTTCGGTCAATGACCCGTTGACGCCCTATGCTATTGCGCGCGGGCGCGTCTGGCATCAACGGTTGCAACCGTTT
ACCTACAGCTTTGATTACCC

Product: amine-oxidase

Products: NA

Alternate protein names: FAD Dependent Oxidoreductase; Amine Oxidase Flavin-Containing; Dehydrogenase; Amine Oxidoreductase; Flavin Containing Amine Oxidoreductase; Flavin-Containing Amine Oxidase; Amino-Oxidase; Oxidoreductase; Amine Oxidase Flavin-Containing Superfamily; FAD-Dependent Oxidoreductase; Amino Oxidase; Flavin Containing Amine Oxidoreductase Protein; Amine Oxidase Flavin-Containing Protein; Amine Oxidase Protein; Amine OxidaseFAD Dependent Oxidoreductase; Amine-Oxidase; Fad Dependent Oxidoreductase; Flavin Containing Amine Oxidoreductas

Number of amino acids: Translated: 430; Mature: 429

Protein sequence:

>430_residues
MSQRIAIVGAGISGLSTAWYLSKAGHQVDVFEANDYLGGHTCTIPVSRPHGDYAIDVGFIVFNDRTYPNYLRLLEELGLQ
GQPTPMGFAVSDEKNGLEYCGDGLGGMFAQKRNLLNFSHWRFIRDILRFNKQAPALLNSAKGDLPLGQYLREQGYGERFA
RDYILAMGGAIWSCSLEQMEVFPARFFIRFFQNHGLLSLNDRPQWFVVPGGSNQYVKPLVDGCNATFHTRTPVQSIRRGS
AGVGVEAGVGVTVTVGGTERHYDQVVLACHSDQALALLSDPDEREEANLSQLGYQDNEVVLHTDTALLPRRERVWSSWNA
MLYAQDQERVQVTYNMNILQGIAAPETFCVTLNASDRIDTKKVLARYHFAHPLFTPQTVAAREQLLKDNGKNATWFAGAW
CRNGFHEDGVVSALNVVAGITGKAQEGGVA

Sequences:

>Translated_430_residues
MSQRIAIVGAGISGLSTAWYLSKAGHQVDVFEANDYLGGHTCTIPVSRPHGDYAIDVGFIVFNDRTYPNYLRLLEELGLQ
GQPTPMGFAVSDEKNGLEYCGDGLGGMFAQKRNLLNFSHWRFIRDILRFNKQAPALLNSAKGDLPLGQYLREQGYGERFA
RDYILAMGGAIWSCSLEQMEVFPARFFIRFFQNHGLLSLNDRPQWFVVPGGSNQYVKPLVDGCNATFHTRTPVQSIRRGS
AGVGVEAGVGVTVTVGGTERHYDQVVLACHSDQALALLSDPDEREEANLSQLGYQDNEVVLHTDTALLPRRERVWSSWNA
MLYAQDQERVQVTYNMNILQGIAAPETFCVTLNASDRIDTKKVLARYHFAHPLFTPQTVAAREQLLKDNGKNATWFAGAW
CRNGFHEDGVVSALNVVAGITGKAQEGGVA
>Mature_429_residues
SQRIAIVGAGISGLSTAWYLSKAGHQVDVFEANDYLGGHTCTIPVSRPHGDYAIDVGFIVFNDRTYPNYLRLLEELGLQG
QPTPMGFAVSDEKNGLEYCGDGLGGMFAQKRNLLNFSHWRFIRDILRFNKQAPALLNSAKGDLPLGQYLREQGYGERFAR
DYILAMGGAIWSCSLEQMEVFPARFFIRFFQNHGLLSLNDRPQWFVVPGGSNQYVKPLVDGCNATFHTRTPVQSIRRGSA
GVGVEAGVGVTVTVGGTERHYDQVVLACHSDQALALLSDPDEREEANLSQLGYQDNEVVLHTDTALLPRRERVWSSWNAM
LYAQDQERVQVTYNMNILQGIAAPETFCVTLNASDRIDTKKVLARYHFAHPLFTPQTVAAREQLLKDNGKNATWFAGAWC
RNGFHEDGVVSALNVVAGITGKAQEGGVA

Specific function: Unknown

COG id: COG2907

COG function: function code R; Predicted NAD/FAD-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47552; Mature: 47421

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQRIAIVGAGISGLSTAWYLSKAGHQVDVFEANDYLGGHTCTIPVSRPHGDYAIDVGFI
CCCEEEEEECCCCHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEECCCCCCCEEEEEEEE
VFNDRTYPNYLRLLEELGLQGQPTPMGFAVSDEKNGLEYCGDGLGGMFAQKRNLLNFSHW
EECCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHCCCHHHHHHHHHCCCCHHHH
RFIRDILRFNKQAPALLNSAKGDLPLGQYLREQGYGERFARDYILAMGGAIWSCSLEQME
HHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCHHEECCHHHHH
VFPARFFIRFFQNHGLLSLNDRPQWFVVPGGSNQYVKPLVDGCNATFHTRTPVQSIRRGS
HHHHHHHHHHHHCCCEEEECCCCCEEEEECCCCCHHHHHHHCCCCEEECCCCHHHHHCCC
AGVGVEAGVGVTVTVGGTERHYDQVVLACHSDQALALLSDPDEREEANLSQLGYQDNEVV
CCCCEECCCCEEEEECCCCCCCCEEEEEECCCCEEEEECCCCCHHHCCHHHCCCCCCEEE
LHTDTALLPRRERVWSSWNAMLYAQDQERVQVTYNMNILQGIAAPETFCVTLNASDRIDT
EEECCCCCCCHHHHHHCCCEEEEEECCCEEEEEEECHHHHHCCCCCEEEEEECCCCCCCH
KKVLARYHFAHPLFTPQTVAAREQLLKDNGKNATWFAGAWCRNGFHEDGVVSALNVVAGI
HHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHHCCCCCCHHHHHHHHHHCC
TGKAQEGGVA
CCCCCCCCCC
>Mature Secondary Structure 
SQRIAIVGAGISGLSTAWYLSKAGHQVDVFEANDYLGGHTCTIPVSRPHGDYAIDVGFI
CCEEEEEECCCCHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEECCCCCCCEEEEEEEE
VFNDRTYPNYLRLLEELGLQGQPTPMGFAVSDEKNGLEYCGDGLGGMFAQKRNLLNFSHW
EECCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHCCCHHHHHHHHHCCCCHHHH
RFIRDILRFNKQAPALLNSAKGDLPLGQYLREQGYGERFARDYILAMGGAIWSCSLEQME
HHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCHHEECCHHHHH
VFPARFFIRFFQNHGLLSLNDRPQWFVVPGGSNQYVKPLVDGCNATFHTRTPVQSIRRGS
HHHHHHHHHHHHCCCEEEECCCCCEEEEECCCCCHHHHHHHCCCCEEECCCCHHHHHCCC
AGVGVEAGVGVTVTVGGTERHYDQVVLACHSDQALALLSDPDEREEANLSQLGYQDNEVV
CCCCEECCCCEEEEECCCCCCCCEEEEEECCCCEEEEECCCCCHHHCCHHHCCCCCCEEE
LHTDTALLPRRERVWSSWNAMLYAQDQERVQVTYNMNILQGIAAPETFCVTLNASDRIDT
EEECCCCCCCHHHHHHCCCEEEEEECCCEEEEEEECHHHHHCCCCCEEEEEECCCCCCCH
KKVLARYHFAHPLFTPQTVAAREQLLKDNGKNATWFAGAWCRNGFHEDGVVSALNVVAGI
HHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHHCCCCCCHHHHHHHHHHCC
TGKAQEGGVA
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA