| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
Click here to switch to the map view.
The map label for this gene is tolQ [H]
Identifier: 110833616
GI number: 110833616
Start: 850533
End: 851219
Strand: Direct
Name: tolQ [H]
Synonym: ABO_0755
Alternate gene names: 110833616
Gene position: 850533-851219 (Clockwise)
Preceding gene: 110833615
Following gene: 110833617
Centisome position: 27.26
GC content: 56.91
Gene sequence:
>687_bases ATGGTTGAGGCATCCAGCATGTCTGTCGTCAGTTTGATCAGCAACGCCACCGTGGTGGTGCAGCTGGTGATGGCGCTATT GATTCTGGCGTCGCTGACGTCCTGGTACATGATTGTTGGCCGTTTCCGGGTGCTTGGGCGTGCTCAACGGGCGGGCCGTG CCTTTGAGGGAAAATTCTGGTCCAGCGATGACCTGGCCTCCCTCTACAACCAGAGCCGCAAAGAGCCGGATCTAGATTCC GGCAGCGAGGCGATTTTTCGCGCGGGCTTTCAGGAGTTTGTCCGGCTTTCTAAAAGCGCACGTGGCGGAGAGGCGGTGAT GGATGGCGCCCAGCGTGCCATGCGGGTTGCCTTGCAGCGCGAACAGACCCGCCTTACCAAGCATTTACCTTTTCTTGCCA CAGTTGGTTCTACCAGCCCTTACGTTGGGTTGTTCGGCACAGTTTGGGGCATCATGAATTCTTTTATGGCGTTGGCGAAC GTGAAACAGGCTACGCTCAGCGTGGTTGCCCCGGGTATTGCCGAGGCGCTGATCGCCACCGCCATTGGCTTGTTTGCCGC GATTCCGGCGGTCATGGCTTATAACCGTTTCTCGGCTCAGAGTGATGCGTTACTGACGGAAAATGAAATGTTCGCGGAAG AGTTTTCTTCCGTACTTCACCGTCAAGCCCATGGGCGCGGAGCATAA
Upstream 100 bases:
>100_bases ATTAAGGTGGCTTGCGTGAGAGCCGATACCCTCAAGCCGGCGGCTATCCCGACGGCACTGTATAAAAAATTTAGCGCGGC CAGCAAAGGAGAAGGGCTAC
Downstream 100 bases:
>100_bases TCATGAGCGGCGTAAAGATACGGGTGCCGCGCAAGCTCGTCGCCGAGATGAACGTGGTGCCTTACATCGATGTGATGCTG GTACTGCTGGTGATCTTCAT
Product: biopolymer transport protein TolQ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MVEASSMSVVSLISNATVVVQLVMALLILASLTSWYMIVGRFRVLGRAQRAGRAFEGKFWSSDDLASLYNQSRKEPDLDS GSEAIFRAGFQEFVRLSKSARGGEAVMDGAQRAMRVALQREQTRLTKHLPFLATVGSTSPYVGLFGTVWGIMNSFMALAN VKQATLSVVAPGIAEALIATAIGLFAAIPAVMAYNRFSAQSDALLTENEMFAEEFSSVLHRQAHGRGA
Sequences:
>Translated_228_residues MVEASSMSVVSLISNATVVVQLVMALLILASLTSWYMIVGRFRVLGRAQRAGRAFEGKFWSSDDLASLYNQSRKEPDLDS GSEAIFRAGFQEFVRLSKSARGGEAVMDGAQRAMRVALQREQTRLTKHLPFLATVGSTSPYVGLFGTVWGIMNSFMALAN VKQATLSVVAPGIAEALIATAIGLFAAIPAVMAYNRFSAQSDALLTENEMFAEEFSSVLHRQAHGRGA >Mature_228_residues MVEASSMSVVSLISNATVVVQLVMALLILASLTSWYMIVGRFRVLGRAQRAGRAFEGKFWSSDDLASLYNQSRKEPDLDS GSEAIFRAGFQEFVRLSKSARGGEAVMDGAQRAMRVALQREQTRLTKHLPFLATVGSTSPYVGLFGTVWGIMNSFMALAN VKQATLSVVAPGIAEALIATAIGLFAAIPAVMAYNRFSAQSDALLTENEMFAEEFSSVLHRQAHGRGA
Specific function: Involved in the tonB-independent uptake of proteins [H]
COG id: COG0811
COG function: function code U; Biopolymer transport proteins
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the exbB/tolQ family [H]
Homologues:
Organism=Escherichia coli, GI1786958, Length=220, Percent_Identity=55, Blast_Score=235, Evalue=2e-63, Organism=Escherichia coli, GI1789381, Length=214, Percent_Identity=37.8504672897196, Blast_Score=112, Evalue=1e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002898 - InterPro: IPR014163 [H]
Pfam domain/function: PF01618 MotA_ExbB [H]
EC number: NA
Molecular weight: Translated: 24631; Mature: 24631
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEASSMSVVSLISNATVVVQLVMALLILASLTSWYMIVGRFRVLGRAQRAGRAFEGKFW CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC SSDDLASLYNQSRKEPDLDSGSEAIFRAGFQEFVRLSKSARGGEAVMDGAQRAMRVALQR CCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH EQTRLTKHLPFLATVGSTSPYVGLFGTVWGIMNSFMALANVKQATLSVVAPGIAEALIAT HHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIGLFAAIPAVMAYNRFSAQSDALLTENEMFAEEFSSVLHRQAHGRGA HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MVEASSMSVVSLISNATVVVQLVMALLILASLTSWYMIVGRFRVLGRAQRAGRAFEGKFW CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC SSDDLASLYNQSRKEPDLDSGSEAIFRAGFQEFVRLSKSARGGEAVMDGAQRAMRVALQR CCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH EQTRLTKHLPFLATVGSTSPYVGLFGTVWGIMNSFMALANVKQATLSVVAPGIAEALIAT HHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIGLFAAIPAVMAYNRFSAQSDALLTENEMFAEEFSSVLHRQAHGRGA HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8955385; 10984043 [H]