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The map label for this gene is ruvB

Identifier: 110833614

GI number: 110833614

Start: 849076

End: 850104

Strand: Direct

Name: ruvB

Synonym: ABO_0753

Alternate gene names: 110833614

Gene position: 849076-850104 (Clockwise)

Preceding gene: 110833613

Following gene: 110833615

Centisome position: 27.21

GC content: 56.17

Gene sequence:

>1029_bases
ATGGATAACGAACGAGTCATTACCGCGGTTGCCGTTGGTAGCCAAGAAGAACAGCAAGACAGGGCGATTCGCCCGGCCAG
CTTGGCGGATTATCATGGGCAGCCGAAAGTCAGCGAGCGCATGGAAATCTTTATTGATGCCGCCCGCGGACGCAATGAGG
CCCTTGATCATACTTTAATTTTCGGCCCGCCCGGTCTCGGCAAGACGACGCTTGCCCATATCATTGCCCGAGAAATGGGC
TGCGATCTCAAGTCCACCTCTGGTCCGGTGCTGGAAAAGGCAGGCGATTTGGCGGCCATCCTGACCAACCTGGAAGAGGG
CGATGTGCTTTTTGTGGATGAAATTCACCGCCTGTCTCCGGTGGTAGAGGAAATCCTTTATCCGGCTATGGAAGATTACC
AGTTGGATATCATGATCGGTGAAGGGCCGGCCGCCCGTTCCATCAAACTGGATCTTCCGCCGTTTACTCTTGTCGGTGCG
ACCACCCGAGCCGGTTTGCTTACCGCTCCGTTGCGTGATCGTTTTGGTATTGTGCAGCGCCTCGAATTCTATTCTGTAGA
TGACTTGTCCGGCATTGTTAGCCGCGCCTGCGATATTCTTGCTATTCCTATCGAAGCGGCCGGTGCCATGGAAGTGGCGC
GCCGCGCACGTGGTACCCCGCGTATTGCCAATCGCCTGCTGCGCCGCGTGCGCGATTACGCCGAAGTGAAGGGCGATGGG
CGGATTACTGAAGAGATCGCCCAGCGAGCCTTGGACATGCTGGAGGTGGACAGTTGTGGTCTGGACGGCACTGACCGGCG
CCTGCTGGATATGATCATGCACAAATTTGATGGTGGGCCGGTGGGACTGGAATCCTTGGCAGCAGCACTCAATGAAGACT
CCGGAACCTTGGAAGAGGTGGTGGAGCCTTACCTGATACAGCAAGGCTTTATTCAACGCACCCCGCGTGGGCGGGCAGTG
ACTAACCATGCTTGGCGTCATTTTGGTTTGCAGCGCCCGCGTCAAGACGGTGATTTGTTTAATGATTGA

Upstream 100 bases:

>100_bases
CAGAGTTGCATAACACTTTGTGATAACAGTAATGGCAGTACGGTATCAGGGTACGATACGCTAGCGACTCCCACGATATA
GAGGCAAGCCCGCTGCAGGC

Downstream 100 bases:

>100_bases
AAAAAATCAACAAAACGGGGAATTTACCCTGCCTGTGCGCGTCTACATCGAAGACACTGATGCAGGTGGCATAGTCTATT
ACGTGAATTACCTGAAATTC

Product: Holliday junction DNA helicase RuvB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MDNERVITAVAVGSQEEQQDRAIRPASLADYHGQPKVSERMEIFIDAARGRNEALDHTLIFGPPGLGKTTLAHIIAREMG
CDLKSTSGPVLEKAGDLAAILTNLEEGDVLFVDEIHRLSPVVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGA
TTRAGLLTAPLRDRFGIVQRLEFYSVDDLSGIVSRACDILAIPIEAAGAMEVARRARGTPRIANRLLRRVRDYAEVKGDG
RITEEIAQRALDMLEVDSCGLDGTDRRLLDMIMHKFDGGPVGLESLAAALNEDSGTLEEVVEPYLIQQGFIQRTPRGRAV
TNHAWRHFGLQRPRQDGDLFND

Sequences:

>Translated_342_residues
MDNERVITAVAVGSQEEQQDRAIRPASLADYHGQPKVSERMEIFIDAARGRNEALDHTLIFGPPGLGKTTLAHIIAREMG
CDLKSTSGPVLEKAGDLAAILTNLEEGDVLFVDEIHRLSPVVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGA
TTRAGLLTAPLRDRFGIVQRLEFYSVDDLSGIVSRACDILAIPIEAAGAMEVARRARGTPRIANRLLRRVRDYAEVKGDG
RITEEIAQRALDMLEVDSCGLDGTDRRLLDMIMHKFDGGPVGLESLAAALNEDSGTLEEVVEPYLIQQGFIQRTPRGRAV
TNHAWRHFGLQRPRQDGDLFND
>Mature_342_residues
MDNERVITAVAVGSQEEQQDRAIRPASLADYHGQPKVSERMEIFIDAARGRNEALDHTLIFGPPGLGKTTLAHIIAREMG
CDLKSTSGPVLEKAGDLAAILTNLEEGDVLFVDEIHRLSPVVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGA
TTRAGLLTAPLRDRFGIVQRLEFYSVDDLSGIVSRACDILAIPIEAAGAMEVARRARGTPRIANRLLRRVRDYAEVKGDG
RITEEIAQRALDMLEVDSCGLDGTDRRLLDMIMHKFDGGPVGLESLAAALNEDSGTLEEVVEPYLIQQGFIQRTPRGRAV
TNHAWRHFGLQRPRQDGDLFND

Specific function: The ruvA-ruvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is an helicase that mediates the Holliday

COG id: COG2255

COG function: function code L; Holliday junction resolvasome, helicase subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ruvB family

Homologues:

Organism=Escherichia coli, GI1788167, Length=333, Percent_Identity=69.0690690690691, Blast_Score=460, Evalue=1e-131,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RUVB_ALCBS (Q0VRJ7)

Other databases:

- EMBL:   AM286690
- RefSeq:   YP_692473.1
- ProteinModelPortal:   Q0VRJ7
- SMR:   Q0VRJ7
- STRING:   Q0VRJ7
- GeneID:   4212638
- GenomeReviews:   AM286690_GR
- KEGG:   abo:ABO_0753
- NMPDR:   fig|393595.12.peg.757
- eggNOG:   COG2255
- HOGENOM:   HBG339960
- OMA:   EKFDGGP
- PhylomeDB:   Q0VRJ7
- ProtClustDB:   PRK00080
- BioCyc:   ABOR393595:ABO_0753-MONOMER
- HAMAP:   MF_00016
- InterPro:   IPR003593
- InterPro:   IPR004605
- InterPro:   IPR008823
- InterPro:   IPR008824
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10
- ProDom:   PD005323
- SMART:   SM00382
- TIGRFAMs:   TIGR00635

Pfam domain/function: PF05491 RuvB_C; PF05496 RuvB_N

EC number: =3.6.4.12

Molecular weight: Translated: 37630; Mature: 37630

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNERVITAVAVGSQEEQQDRAIRPASLADYHGQPKVSERMEIFIDAARGRNEALDHTLI
CCCCEEEEEEECCCCHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEE
FGPPGLGKTTLAHIIAREMGCDLKSTSGPVLEKAGDLAAILTNLEEGDVLFVDEIHRLSP
ECCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHCHHHHHHHCCCCCCEEEHHHHHHHHH
VVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGLLTAPLRDRFGIVQR
HHHHHHHCCCCCCEEEEEECCCCCCCEEEECCCCEEEECCCHHCCEEECCHHHHHHHHHH
LEFYSVDDLSGIVSRACDILAIPIEAAGAMEVARRARGTPRIANRLLRRVRDYAEVKGDG
HHHCCCHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC
RITEEIAQRALDMLEVDSCGLDGTDRRLLDMIMHKFDGGPVGLESLAAALNEDSGTLEEV
CHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHH
VEPYLIQQGFIQRTPRGRAVTNHAWRHFGLQRPRQDGDLFND
HHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MDNERVITAVAVGSQEEQQDRAIRPASLADYHGQPKVSERMEIFIDAARGRNEALDHTLI
CCCCEEEEEEECCCCHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEE
FGPPGLGKTTLAHIIAREMGCDLKSTSGPVLEKAGDLAAILTNLEEGDVLFVDEIHRLSP
ECCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHCHHHHHHHCCCCCCEEEHHHHHHHHH
VVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGLLTAPLRDRFGIVQR
HHHHHHHCCCCCCEEEEEECCCCCCCEEEECCCCEEEECCCHHCCEEECCHHHHHHHHHH
LEFYSVDDLSGIVSRACDILAIPIEAAGAMEVARRARGTPRIANRLLRRVRDYAEVKGDG
HHHCCCHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC
RITEEIAQRALDMLEVDSCGLDGTDRRLLDMIMHKFDGGPVGLESLAAALNEDSGTLEEV
CHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHH
VEPYLIQQGFIQRTPRGRAVTNHAWRHFGLQRPRQDGDLFND
HHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA