| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110833599
Identifier: 110833599
GI number: 110833599
Start: 830800
End: 831837
Strand: Direct
Name: 110833599
Synonym: ABO_0738
Alternate gene names: NA
Gene position: 830800-831837 (Clockwise)
Preceding gene: 110833597
Following gene: 110833601
Centisome position: 26.63
GC content: 53.95
Gene sequence:
>1038_bases GTGAGCGCGACAGCCAACAAATGCTATCAAGCCTTTATCAGCGCCACGTTTCCCGATATGCGGGGAGCGCGCCAGGCGTT GATGCCGCCCATGTTGGCTAGTGGCCTGATTCCCACCGGATTGGACAGTGCTGCTGCAGAATGTAATACGCTGTTGCCGG TCATCCAGACGCTGATTGATAGCAGTGATTATTTCATTCTGATTGTGGGAGGTCGTTACGGAACGCTCTCTCCTATGGGC TTGAGTGAGATACATCGCGAGTACATTTTCGCCGCGACTAAACGCAAACCTATCATCGCGTTTATTCATGATAATCCTTC TGAGCTGTCGGAAGCACAACGCGAGCCCACCCGTGAAGGGCAGGTGCGACGAGACGATTTTGTTCGCCTGCTAGAAGAAA AAGTGGTCTGTTATCGGTGGAGTACCGAAGCGGGCTTGAATGCGCTTGCTGGTAAGGTTATCCCTAACTTTATTCGGGAT CACCAAGCGGTGGGGTGGGTACGTGCCGATCAGGTTGGTGAGGGCCTCGGCGCCTCGAGTGAAGCGCTGAAGGCGCGTAT TGAAATGCTCGAAAAAGAGCGGGAAGAGGCCTTTAACCAAGCACGCCCACCATTGAGGACTCTAGCCCGAGGTGGGGACC GGGTGGCACTGGATTATTCTTGTAATGTTTATGAGGGCGGTGACTGTAAGCTGGCCACGGTGACTACTAAAATTAGCTGG GACCAGGCGTTTTCTTGTGTGGCGCCACTAATGCTGAACCCGGTGGCTGAGTCGGTGTTACAGAAGGCTCTGGAAGGTTT TATTGGCCGTAAAGCATTGGGGGATGTGCAGGCAGATTTTCCGCGAGCTCATGCGGTACGCAACGTGGTGCTGGCAACGC ATGCTTTTAATCAGGTGAAAATTCATCTGCGAGCACTGGGGCTGATTAACCGCTCCGCGGAAAAAGATAGCCGAGGCCTA CCGCTCTGGCAATTGACGGCCCACGGCGACAATACCATGAGCCAAGTGATGGCGGTAAAGCGGAGCGTTAAGGTCTAG
Upstream 100 bases:
>100_bases TACCAGGCTGGCTTGTGATCGGGGCAGTCAGGCGTTTTAATAACCATCCGCCGACCGAACCCAATGGGCCGGAATTACAA AGAATGAGGTCATGATCAGG
Downstream 100 bases:
>100_bases CTGATAATTGATAACAGCGCGAATGGGCCGTTGGTGATTCTCAAAAGCAAAGAGGCCGCGCCCATTCTATGGGCGCGGCC TCTTTGCTTTTCGAGGAATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 345; Mature: 344
Protein sequence:
>345_residues MSATANKCYQAFISATFPDMRGARQALMPPMLASGLIPTGLDSAAAECNTLLPVIQTLIDSSDYFILIVGGRYGTLSPMG LSEIHREYIFAATKRKPIIAFIHDNPSELSEAQREPTREGQVRRDDFVRLLEEKVVCYRWSTEAGLNALAGKVIPNFIRD HQAVGWVRADQVGEGLGASSEALKARIEMLEKEREEAFNQARPPLRTLARGGDRVALDYSCNVYEGGDCKLATVTTKISW DQAFSCVAPLMLNPVAESVLQKALEGFIGRKALGDVQADFPRAHAVRNVVLATHAFNQVKIHLRALGLINRSAEKDSRGL PLWQLTAHGDNTMSQVMAVKRSVKV
Sequences:
>Translated_345_residues MSATANKCYQAFISATFPDMRGARQALMPPMLASGLIPTGLDSAAAECNTLLPVIQTLIDSSDYFILIVGGRYGTLSPMG LSEIHREYIFAATKRKPIIAFIHDNPSELSEAQREPTREGQVRRDDFVRLLEEKVVCYRWSTEAGLNALAGKVIPNFIRD HQAVGWVRADQVGEGLGASSEALKARIEMLEKEREEAFNQARPPLRTLARGGDRVALDYSCNVYEGGDCKLATVTTKISW DQAFSCVAPLMLNPVAESVLQKALEGFIGRKALGDVQADFPRAHAVRNVVLATHAFNQVKIHLRALGLINRSAEKDSRGL PLWQLTAHGDNTMSQVMAVKRSVKV >Mature_344_residues SATANKCYQAFISATFPDMRGARQALMPPMLASGLIPTGLDSAAAECNTLLPVIQTLIDSSDYFILIVGGRYGTLSPMGL SEIHREYIFAATKRKPIIAFIHDNPSELSEAQREPTREGQVRRDDFVRLLEEKVVCYRWSTEAGLNALAGKVIPNFIRDH QAVGWVRADQVGEGLGASSEALKARIEMLEKEREEAFNQARPPLRTLARGGDRVALDYSCNVYEGGDCKLATVTTKISWD QAFSCVAPLMLNPVAESVLQKALEGFIGRKALGDVQADFPRAHAVRNVVLATHAFNQVKIHLRALGLINRSAEKDSRGLP LWQLTAHGDNTMSQVMAVKRSVKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37892; Mature: 37761
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATANKCYQAFISATFPDMRGARQALMPPMLASGLIPTGLDSAAAECNTLLPVIQTLID CCCCHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHC SSDYFILIVGGRYGTLSPMGLSEIHREYIFAATKRKPIIAFIHDNPSELSEAQREPTREG CCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHCCCCCCC QVRRDDFVRLLEEKVVCYRWSTEAGLNALAGKVIPNFIRDHQAVGWVRADQVGEGLGASS CCCHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHCEEEHHHHCCCCCCCH EALKARIEMLEKEREEAFNQARPPLRTLARGGDRVALDYSCNVYEGGDCKLATVTTKISW HHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEEEEECCEEECCCEEEEEEEEECCH DQAFSCVAPLMLNPVAESVLQKALEGFIGRKALGDVQADFPRAHAVRNVVLATHAFNQVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHH IHLRALGLINRSAEKDSRGLPLWQLTAHGDNTMSQVMAVKRSVKV HHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCC >Mature Secondary Structure SATANKCYQAFISATFPDMRGARQALMPPMLASGLIPTGLDSAAAECNTLLPVIQTLID CCCHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHC SSDYFILIVGGRYGTLSPMGLSEIHREYIFAATKRKPIIAFIHDNPSELSEAQREPTREG CCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHCCCCCCC QVRRDDFVRLLEEKVVCYRWSTEAGLNALAGKVIPNFIRDHQAVGWVRADQVGEGLGASS CCCHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHCEEEHHHHCCCCCCCH EALKARIEMLEKEREEAFNQARPPLRTLARGGDRVALDYSCNVYEGGDCKLATVTTKISW HHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEEEEECCEEECCCEEEEEEEEECCH DQAFSCVAPLMLNPVAESVLQKALEGFIGRKALGDVQADFPRAHAVRNVVLATHAFNQVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHH IHLRALGLINRSAEKDSRGLPLWQLTAHGDNTMSQVMAVKRSVKV HHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA