| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is chrA
Identifier: 110833597
GI number: 110833597
Start: 828485
End: 829636
Strand: Direct
Name: chrA
Synonym: ABO_0736
Alternate gene names: NA
Gene position: 828485-829636 (Clockwise)
Preceding gene: 110833594
Following gene: 110833599
Centisome position: 26.55
GC content: 58.85
Gene sequence:
>1152_bases GTGCAGTTAATGACCGATATTTTTCGGCAGTTTTTGTTGTTGGGTTTGATCAGCTTTGGCGGGCCGGCGGCGCACGTGGG CTATTTCCATCAGCGTTTCGTGGTGCAACTGCAATGGCTGAATGACGAGGATTTTGCGCGCTTGTTGGCGCTTACCCAGT TTCTACCGGGGCCGGCATCCAGCCAGTTGGGCTTTGCTATCGGTCGGTTACGGGGTGGGGTGGCTGGCGCTTTTGTGGCG TTTATAGGCTTTACGCTTCCGTCTTTTCTCTTGATGGGGTTGCTGGCCCTTTATGCCAACGCATTGCCGCTCTGGCTGCA GGGGGGAGTGATCAGCGGGCTTAAGTGGCTGGCGGTGGTCGTGGTTGCTGATGCGGTATGGAATATGGGGCGGCGCTTCT GTACCCATAAATTGACCCGGTGTTTGGCAATGGTGGTGGCGTTACTGTTAATCGGTTGGCCTACCCTCTACGGGCAAGTG ATCGCGTTGCTGTTAGCGGCGATTGTGGGGGGGCGTTGGTTGCGCCCAGTGCTAGCCGGCCCAGCTGTGGGCAAGCCCGT GCTACGGCGGCGTCCTTTGGTGCTGTTTGGGCTATTAGTGGTGGCGGCGCTGTTAACTGACGGACCGTTGCTGGCGCTGT GGAATGATTTCTTCACCGCCGGCGCCTTGGTTTTCGGCGGCGGCCATGTGGTTCTCCCCTTGCTGCAGGAATTGGTGGGC TCACGGCTGAGCCCGGATGCCTTCCTCACCGGCTACGCCGCCGCGCAAGCGGTGCCCGGGCCGATGTTCTCATTGGCCTC CTACTTAGGGGCTGTGTTATTGCCGGCTAGCCCGTGGTGGGGCGCATTGATTGCCACCCTGGCCATTTTTTTGCCCGGTT TCTTACTGGTGTTGGGGTTGATGGACGCTTGGCAGTGGTTGTCTTCTCGTCCTGCACTAGCCGGGGCGGTGGCGGGCATC AATGCGGCAGTGGTTGGGTTGCTGTTGGCGGCGCTTTATCAGCCTGTGTTTGTTTCCGCGGTGCATGATGTTTGGGATCT GTTGGCGGTGTTGACTGGTTTATTGTTGCTGTACAGCGGCAAGGTGCCGCTATGGGGGATGGTGCTGTGCATGACGATGC TGGGCGTGCTGGCACAGACCATGCTGAACTAA
Upstream 100 bases:
>100_bases GGATTGCATGGTCGGGAGTATACCTGCAGGGCGGAAACGATGACATCCGTCTGACACTACGGTGTGGTAGCGTTTTGGGT ACAACTGATAATAGGTGTGA
Downstream 100 bases:
>100_bases GCTTTTTTCTGGCGCCACATTGGTGCCCTTGGGACTTGTCCTCGGGGCTACCAAGTAAGGAGAGGTTCGCCTCTCACGAA AAGCCCCCCCCGCCTAGAGA
Product: chromate transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 383; Mature: 383
Protein sequence:
>383_residues MQLMTDIFRQFLLLGLISFGGPAAHVGYFHQRFVVQLQWLNDEDFARLLALTQFLPGPASSQLGFAIGRLRGGVAGAFVA FIGFTLPSFLLMGLLALYANALPLWLQGGVISGLKWLAVVVVADAVWNMGRRFCTHKLTRCLAMVVALLLIGWPTLYGQV IALLLAAIVGGRWLRPVLAGPAVGKPVLRRRPLVLFGLLVVAALLTDGPLLALWNDFFTAGALVFGGGHVVLPLLQELVG SRLSPDAFLTGYAAAQAVPGPMFSLASYLGAVLLPASPWWGALIATLAIFLPGFLLVLGLMDAWQWLSSRPALAGAVAGI NAAVVGLLLAALYQPVFVSAVHDVWDLLAVLTGLLLLYSGKVPLWGMVLCMTMLGVLAQTMLN
Sequences:
>Translated_383_residues MQLMTDIFRQFLLLGLISFGGPAAHVGYFHQRFVVQLQWLNDEDFARLLALTQFLPGPASSQLGFAIGRLRGGVAGAFVA FIGFTLPSFLLMGLLALYANALPLWLQGGVISGLKWLAVVVVADAVWNMGRRFCTHKLTRCLAMVVALLLIGWPTLYGQV IALLLAAIVGGRWLRPVLAGPAVGKPVLRRRPLVLFGLLVVAALLTDGPLLALWNDFFTAGALVFGGGHVVLPLLQELVG SRLSPDAFLTGYAAAQAVPGPMFSLASYLGAVLLPASPWWGALIATLAIFLPGFLLVLGLMDAWQWLSSRPALAGAVAGI NAAVVGLLLAALYQPVFVSAVHDVWDLLAVLTGLLLLYSGKVPLWGMVLCMTMLGVLAQTMLN >Mature_383_residues MQLMTDIFRQFLLLGLISFGGPAAHVGYFHQRFVVQLQWLNDEDFARLLALTQFLPGPASSQLGFAIGRLRGGVAGAFVA FIGFTLPSFLLMGLLALYANALPLWLQGGVISGLKWLAVVVVADAVWNMGRRFCTHKLTRCLAMVVALLLIGWPTLYGQV IALLLAAIVGGRWLRPVLAGPAVGKPVLRRRPLVLFGLLVVAALLTDGPLLALWNDFFTAGALVFGGGHVVLPLLQELVG SRLSPDAFLTGYAAAQAVPGPMFSLASYLGAVLLPASPWWGALIATLAIFLPGFLLVLGLMDAWQWLSSRPALAGAVAGI NAAVVGLLLAALYQPVFVSAVHDVWDLLAVLTGLLLLYSGKVPLWGMVLCMTMLGVLAQTMLN
Specific function: Unknown
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003370 - InterPro: IPR014047 [H]
Pfam domain/function: PF02417 Chromate_transp [H]
EC number: NA
Molecular weight: Translated: 40801; Mature: 40801
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLMTDIFRQFLLLGLISFGGPAAHVGYFHQRFVVQLQWLNDEDFARLLALTQFLPGPAS CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHCCCCCC SQLGFAIGRLRGGVAGAFVAFIGFTLPSFLLMGLLALYANALPLWLQGGVISGLKWLAVV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHH VVADAVWNMGRRFCTHKLTRCLAMVVALLLIGWPTLYGQVIALLLAAIVGGRWLRPVLAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHCC PAVGKPVLRRRPLVLFGLLVVAALLTDGPLLALWNDFFTAGALVFGGGHVVLPLLQELVG CCCCCHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC SRLSPDAFLTGYAAAQAVPGPMFSLASYLGAVLLPASPWWGALIATLAIFLPGFLLVLGL CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH MDAWQWLSSRPALAGAVAGINAAVVGLLLAALYQPVFVSAVHDVWDLLAVLTGLLLLYSG HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KVPLWGMVLCMTMLGVLAQTMLN CCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQLMTDIFRQFLLLGLISFGGPAAHVGYFHQRFVVQLQWLNDEDFARLLALTQFLPGPAS CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHCCCCCC SQLGFAIGRLRGGVAGAFVAFIGFTLPSFLLMGLLALYANALPLWLQGGVISGLKWLAVV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHH VVADAVWNMGRRFCTHKLTRCLAMVVALLLIGWPTLYGQVIALLLAAIVGGRWLRPVLAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHCC PAVGKPVLRRRPLVLFGLLVVAALLTDGPLLALWNDFFTAGALVFGGGHVVLPLLQELVG CCCCCHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC SRLSPDAFLTGYAAAQAVPGPMFSLASYLGAVLLPASPWWGALIATLAIFLPGFLLVLGL CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH MDAWQWLSSRPALAGAVAGINAAVVGLLLAALYQPVFVSAVHDVWDLLAVLTGLLLLYSG HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KVPLWGMVLCMTMLGVLAQTMLN CCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]