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The map label for this gene is petA [H]

Identifier: 110833439

GI number: 110833439

Start: 636314

End: 636901

Strand: Direct

Name: petA [H]

Synonym: ABO_0578

Alternate gene names: 110833439

Gene position: 636314-636901 (Clockwise)

Preceding gene: 110833438

Following gene: 110833440

Centisome position: 20.39

GC content: 55.61

Gene sequence:

>588_bases
ATGAGCAACGACGGTGTTAATAGCAGCCGCCGCACTTTCCTGATCGGTTTAACTTCGGCAATTGGTGCCGCAGGAGCCGT
TGGCGTGGCTGTACCTTTCGTGAAGTCCTGGCAACCCAGTGCCAAAGCCAAGAATGCCGGTGCGCCGGTAAAAGTGGATA
TTGGTCGGCTGGAAGCAGGACAGCGCGTAGTAGAAGAATGGCGGGGCCAGCCCATCTGGGTGGTGCGTCGCACGGAAAAT
ATGCTGGATACTCTGCCTCAGCTGGATGAAAAGCTGCGTGACCCTGCGTCAGAAGTGGATCAGCAGCCTGATTACGCCAG
GAACGAATGGCGTTCAATTAAAAAAGAATACTTGGTGCTTGTGGGTACCTGTACTCACCTGGGCTGTTCTCCTTTGTTTG
AGGAACAGCCTACGGTCGAGCTGGAATTCGGGGGCTTCTTCTGCCCGTGCCATGGCTCCAAGTTTGATTTCGCTGGCCGG
GTTTACAAGGGTGTTCCTGCGCCGACCAACCTGGTGGTGCCGCCACATTCGTACCTGAGCGAAGCTGTCGTTATCGTCGG
CTCTGAGGAAGGGGAGACTAAGGCATGA

Upstream 100 bases:

>100_bases
TTCTTTACCATTTGCGCCGCCTTACTCCGCCCGTAACGCGAGGATAAACCTCGAGTCTCGGACTAACCCCGAGCGTGGGA
TCTAAGGGGAGAACATCTCA

Downstream 100 bases:

>100_bases
TGGGAATGGTGAATCGCGTTGTCGATTGGGTAGATGCCCGTCTGCCCGTGGTGGACTCTTATAAGCGGCACATGTCCGAA
TACTATGCGCCGAAGAACTT

Product: ubiquinol--cytochrome c reductase, iron-sulfur subunit

Products: NA

Alternate protein names: Rieske iron-sulfur protein; RISP [H]

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MSNDGVNSSRRTFLIGLTSAIGAAGAVGVAVPFVKSWQPSAKAKNAGAPVKVDIGRLEAGQRVVEEWRGQPIWVVRRTEN
MLDTLPQLDEKLRDPASEVDQQPDYARNEWRSIKKEYLVLVGTCTHLGCSPLFEEQPTVELEFGGFFCPCHGSKFDFAGR
VYKGVPAPTNLVVPPHSYLSEAVVIVGSEEGETKA

Sequences:

>Translated_195_residues
MSNDGVNSSRRTFLIGLTSAIGAAGAVGVAVPFVKSWQPSAKAKNAGAPVKVDIGRLEAGQRVVEEWRGQPIWVVRRTEN
MLDTLPQLDEKLRDPASEVDQQPDYARNEWRSIKKEYLVLVGTCTHLGCSPLFEEQPTVELEFGGFFCPCHGSKFDFAGR
VYKGVPAPTNLVVPPHSYLSEAVVIVGSEEGETKA
>Mature_194_residues
SNDGVNSSRRTFLIGLTSAIGAAGAVGVAVPFVKSWQPSAKAKNAGAPVKVDIGRLEAGQRVVEEWRGQPIWVVRRTENM
LDTLPQLDEKLRDPASEVDQQPDYARNEWRSIKKEYLVLVGTCTHLGCSPLFEEQPTVELEFGGFFCPCHGSKFDFAGRV
YKGVPAPTNLVVPPHSYLSEAVVIVGSEEGETKA

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG0723

COG function: function code C; Rieske Fe-S protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Homo sapiens, GI163644321, Length=178, Percent_Identity=35.3932584269663, Blast_Score=109, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17540418, Length=156, Percent_Identity=34.6153846153846, Blast_Score=99, Evalue=9e-22,
Organism=Saccharomyces cerevisiae, GI6320811, Length=174, Percent_Identity=33.3333333333333, Blast_Score=112, Evalue=5e-26,
Organism=Drosophila melanogaster, GI24580896, Length=156, Percent_Identity=38.4615384615385, Blast_Score=108, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR014349
- InterPro:   IPR005805
- InterPro:   IPR019470
- InterPro:   IPR006317 [H]

Pfam domain/function: PF00355 Rieske; PF10399 UCR_Fe-S_N [H]

EC number: =1.10.2.2 [H]

Molecular weight: Translated: 21257; Mature: 21126

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: PS00199 RIESKE_1 ; PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNDGVNSSRRTFLIGLTSAIGAAGAVGVAVPFVKSWQPSAKAKNAGAPVKVDIGRLEAG
CCCCCCCCCCCEEEEEEHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHH
QRVVEEWRGQPIWVVRRTENMLDTLPQLDEKLRDPASEVDQQPDYARNEWRSIKKEYLVL
HHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHEEEE
VGTCTHLGCSPLFEEQPTVELEFGGFFCPCHGSKFDFAGRVYKGVPAPTNLVVPPHSYLS
EECCCCCCCCCCCCCCCCEEEECCCEEECCCCCCCCCCCHHCCCCCCCCEEEECCHHHHC
EAVVIVGSEEGETKA
CEEEEEECCCCCCCC
>Mature Secondary Structure 
SNDGVNSSRRTFLIGLTSAIGAAGAVGVAVPFVKSWQPSAKAKNAGAPVKVDIGRLEAG
CCCCCCCCCCEEEEEEHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHH
QRVVEEWRGQPIWVVRRTENMLDTLPQLDEKLRDPASEVDQQPDYARNEWRSIKKEYLVL
HHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHEEEE
VGTCTHLGCSPLFEEQPTVELEFGGFFCPCHGSKFDFAGRVYKGVPAPTNLVVPPHSYLS
EECCCCCCCCCCCCCCCCEEEECCCEEECCCCCCCCCCCHHCCCCCCCCEEEECCHHHHC
EAVVIVGSEEGETKA
CEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA