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The map label for this gene is ybgI [C]

Identifier: 110833427

GI number: 110833427

Start: 625040

End: 625834

Strand: Direct

Name: ybgI [C]

Synonym: ABO_0566

Alternate gene names: 110833427

Gene position: 625040-625834 (Clockwise)

Preceding gene: 110833425

Following gene: 110833428

Centisome position: 20.03

GC content: 54.97

Gene sequence:

>795_bases
GTGACCATATTTATACTTTCCGACCTTCCGGTAGGTGCCATGCTCAAGCGCGATTACATGTTGTCTCTGCTCGACCAGGA
ACTGGCGGTGGACTGTTTTCAGGATTACTGCCCTAATGGTTTGCAGGTGGAGGGCCGCGAGCAGATCCACCGTGTGGTAT
CCGGGGTGACGGCCTGCCAAGCACTCATTGATGCTGCCATAGTAGAAGAAGCGGATGCGATTCTGGTGCATCATGGCTAT
TTCTGGAAAGGGGAAAGCCAGCAGATTCGAGGCATGAAGAAACAGCGGCTGCAAACCCTGCTACGGCATGATATCAACGT
GTTTGCGTACCATTTGCCATTGGATGCCCATCCGACGCTGGGTAACAATGCGCAGCTGGCTCGACGGTTGGGTCTGACCA
CCGAGGGAGGGCTCGATGACTCTCCTCGACCTATCGGCAATGTGGGGCGGTTGGATAGCCCTATGAGCGCGTCGGAATTC
GCGGCCCATGTGGAAGCGGTGCTGGGGCGTACACCACTGCATATTGGTGATCCTGGGGATGAAATTGAAACCATCGGCTG
GTGCACTGGCGGAGCCCAGGGGTTTATCGAAAAGGCTCAGAGCAAGGGCGTGGATGCTTACCTGAGTGGCGAAATTTCAG
AACCGACCACCCATTTTGCCCGGGAAACCGGGATGCACTATTTTGCCTGTGGTCACCATGCCACCGAGCGTTATGGCGCC
ATGGCGCTAGGGCAGTGGCTTAGTGATCATTATGGTATCGAGCATACCTTTATTGATATCGATAACCCGGCTTGA

Upstream 100 bases:

>100_bases
GCCCCCTATTGCTATGCTCTCGACAGCACATAGTCATAGATTAGCTTACACCGTGCAGCCGATGATCGGGTTGGCGCGGT
GATCGACGATCACGGGTTCT

Downstream 100 bases:

>100_bases
ACCGGGAGTAGTACGAGGGTTTCCTGTCTGATGAAAGTCACTGTGATTTATAACCCGGCTGCCGGCGGCGGAAGGGAAGC
GCTGCTTTACCGATTTGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MTIFILSDLPVGAMLKRDYMLSLLDQELAVDCFQDYCPNGLQVEGREQIHRVVSGVTACQALIDAAIVEEADAILVHHGY
FWKGESQQIRGMKKQRLQTLLRHDINVFAYHLPLDAHPTLGNNAQLARRLGLTTEGGLDDSPRPIGNVGRLDSPMSASEF
AAHVEAVLGRTPLHIGDPGDEIETIGWCTGGAQGFIEKAQSKGVDAYLSGEISEPTTHFARETGMHYFACGHHATERYGA
MALGQWLSDHYGIEHTFIDIDNPA

Sequences:

>Translated_264_residues
MTIFILSDLPVGAMLKRDYMLSLLDQELAVDCFQDYCPNGLQVEGREQIHRVVSGVTACQALIDAAIVEEADAILVHHGY
FWKGESQQIRGMKKQRLQTLLRHDINVFAYHLPLDAHPTLGNNAQLARRLGLTTEGGLDDSPRPIGNVGRLDSPMSASEF
AAHVEAVLGRTPLHIGDPGDEIETIGWCTGGAQGFIEKAQSKGVDAYLSGEISEPTTHFARETGMHYFACGHHATERYGA
MALGQWLSDHYGIEHTFIDIDNPA
>Mature_263_residues
TIFILSDLPVGAMLKRDYMLSLLDQELAVDCFQDYCPNGLQVEGREQIHRVVSGVTACQALIDAAIVEEADAILVHHGYF
WKGESQQIRGMKKQRLQTLLRHDINVFAYHLPLDAHPTLGNNAQLARRLGLTTEGGLDDSPRPIGNVGRLDSPMSASEFA
AHVEAVLGRTPLHIGDPGDEIETIGWCTGGAQGFIEKAQSKGVDAYLSGEISEPTTHFARETGMHYFACGHHATERYGAM
ALGQWLSDHYGIEHTFIDIDNPA

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Escherichia coli, GI1786928, Length=251, Percent_Identity=52.9880478087649, Blast_Score=276, Evalue=1e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 28978; Mature: 28847

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIFILSDLPVGAMLKRDYMLSLLDQELAVDCFQDYCPNGLQVEGREQIHRVVSGVTACQ
CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHH
ALIDAAIVEEADAILVHHGYFWKGESQQIRGMKKQRLQTLLRHDINVFAYHLPLDAHPTL
HHHHHHHHHCCCEEEEECCEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC
GNNAQLARRLGLTTEGGLDDSPRPIGNVGRLDSPMSASEFAAHVEAVLGRTPLHIGDPGD
CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEECCCCCC
EIETIGWCTGGAQGFIEKAQSKGVDAYLSGEISEPTTHFARETGMHYFACGHHATERYGA
CCCEEEEECCCHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHCCCEEEECCCHHHHHHHH
MALGQWLSDHYGIEHTFIDIDNPA
HHHHHHHHHHCCCEEEEEECCCCC
>Mature Secondary Structure 
TIFILSDLPVGAMLKRDYMLSLLDQELAVDCFQDYCPNGLQVEGREQIHRVVSGVTACQ
EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHH
ALIDAAIVEEADAILVHHGYFWKGESQQIRGMKKQRLQTLLRHDINVFAYHLPLDAHPTL
HHHHHHHHHCCCEEEEECCEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC
GNNAQLARRLGLTTEGGLDDSPRPIGNVGRLDSPMSASEFAAHVEAVLGRTPLHIGDPGD
CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEECCCCCC
EIETIGWCTGGAQGFIEKAQSKGVDAYLSGEISEPTTHFARETGMHYFACGHHATERYGA
CCCEEEEECCCHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHCCCEEEECCCHHHHHHHH
MALGQWLSDHYGIEHTFIDIDNPA
HHHHHHHHHHCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]