| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
Click here to switch to the map view.
The map label for this gene is maf-1 [C]
Identifier: 110833394
GI number: 110833394
Start: 585647
End: 586228
Strand: Direct
Name: maf-1 [C]
Synonym: ABO_0533
Alternate gene names: 110833394
Gene position: 585647-586228 (Clockwise)
Preceding gene: 110833393
Following gene: 110833395
Centisome position: 18.77
GC content: 58.42
Gene sequence:
>582_bases ATGATTCTTTACCTTGCCTCCGGTTCTCCTCGCCGTGCTGAATTGCTTCAGCAGATTGCGGTTCCCTTTACGGTGCTACC GGCGCCGTCCATTGATGAAACGCCTCGGTCGGCCGAGGCGGCAGTGGACTATGTGCGACGTATGGCCCGCGAAAAGGCAT TGGTGGGCCAGGCTCGTATGCCTACGCCTGGTGCTGTGTTGGGGGCTGATACGGCGGTGGTACTGGGAGACCAAATTCTG GGTAAGCCTGCCGATGATACAGAGGCGCTGGCCATGTTGACGCAGCTGAGTGGGACGTCTCATCAGGTTATCTCAGCGGT GTGTGTGTGCAGTGAAGGTCGGCAGGCTGTGCGTCACACGGTAACAACCGTACAATTTCGACCGTTTGAAGCCGCCCGGC TAGAGGTCTATGTGGCCACGGGTGAAGGGCGCGACAAAGCGGGCAGTTACGGCATTCAAGGGTTGGGTGGCGCACTGGTG GAGTCGTTGTCTGGCAGTTACAGTGGGGTGGTTGGCCTGCCGCTGGAGCAAACGGTGGAACTGCTTGAATGGGCCGACAT TCCTTACTGGCAAATCGACTAA
Upstream 100 bases:
>100_bases TTGATAACGAAACTGTCGTCATGCAGTGGGCGCAATGACGAGTAGTTAGAATTCTTCGCTATCCATTTTCCCTTATCAAT TATTCATTTTTTCTGGCCCT
Downstream 100 bases:
>100_bases CTTATGGTATTGACCCGCTTCGCACGCTGGCGCCGATTTTTTCCTTCCCTGTGGTGGACGGTCGCGACAGTTTTATTGCT GATGGCCGCTTACGTGGTGG
Product: maf protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MILYLASGSPRRAELLQQIAVPFTVLPAPSIDETPRSAEAAVDYVRRMAREKALVGQARMPTPGAVLGADTAVVLGDQIL GKPADDTEALAMLTQLSGTSHQVISAVCVCSEGRQAVRHTVTTVQFRPFEAARLEVYVATGEGRDKAGSYGIQGLGGALV ESLSGSYSGVVGLPLEQTVELLEWADIPYWQID
Sequences:
>Translated_193_residues MILYLASGSPRRAELLQQIAVPFTVLPAPSIDETPRSAEAAVDYVRRMAREKALVGQARMPTPGAVLGADTAVVLGDQIL GKPADDTEALAMLTQLSGTSHQVISAVCVCSEGRQAVRHTVTTVQFRPFEAARLEVYVATGEGRDKAGSYGIQGLGGALV ESLSGSYSGVVGLPLEQTVELLEWADIPYWQID >Mature_193_residues MILYLASGSPRRAELLQQIAVPFTVLPAPSIDETPRSAEAAVDYVRRMAREKALVGQARMPTPGAVLGADTAVVLGDQIL GKPADDTEALAMLTQLSGTSHQVISAVCVCSEGRQAVRHTVTTVQFRPFEAARLEVYVATGEGRDKAGSYGIQGLGGALV ESLSGSYSGVVGLPLEQTVELLEWADIPYWQID
Specific function: Unknown
COG id: COG0424
COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the maf family
Homologues:
Organism=Homo sapiens, GI117553627, Length=192, Percent_Identity=38.5416666666667, Blast_Score=114, Evalue=5e-26, Organism=Homo sapiens, GI291045183, Length=187, Percent_Identity=35.8288770053476, Blast_Score=97, Evalue=1e-20, Organism=Homo sapiens, GI291045181, Length=147, Percent_Identity=40.8163265306122, Blast_Score=95, Evalue=3e-20, Organism=Homo sapiens, GI310133124, Length=134, Percent_Identity=41.7910447761194, Blast_Score=93, Evalue=2e-19, Organism=Escherichia coli, GI1789646, Length=180, Percent_Identity=48.8888888888889, Blast_Score=147, Evalue=3e-37, Organism=Escherichia coli, GI87081830, Length=183, Percent_Identity=33.3333333333333, Blast_Score=82, Evalue=3e-17, Organism=Caenorhabditis elegans, GI193202443, Length=182, Percent_Identity=30.7692307692308, Blast_Score=80, Evalue=9e-16, Organism=Drosophila melanogaster, GI78706856, Length=182, Percent_Identity=36.2637362637363, Blast_Score=101, Evalue=3e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y533_ALCBS (Q0VS67)
Other databases:
- EMBL: AM286690 - RefSeq: YP_692253.1 - ProteinModelPortal: Q0VS67 - SMR: Q0VS67 - STRING: Q0VS67 - GeneID: 4211495 - GenomeReviews: AM286690_GR - KEGG: abo:ABO_0533 - NMPDR: fig|393595.12.peg.530 - eggNOG: COG0424 - HOGENOM: HBG414045 - OMA: VVGLPLC - PhylomeDB: Q0VS67 - BioCyc: ABOR393595:ABO_0533-MONOMER - GO: GO:0005737 - HAMAP: MF_00528 - InterPro: IPR003697 - PIRSF: PIRSF006305 - TIGRFAMs: TIGR00172
Pfam domain/function: PF02545 Maf
EC number: NA
Molecular weight: Translated: 20497; Mature: 20497
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: ACT_SITE 33-33
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILYLASGSPRRAELLQQIAVPFTVLPAPSIDETPRSAEAAVDYVRRMAREKALVGQARM CEEEEECCCCHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC PTPGAVLGADTAVVLGDQILGKPADDTEALAMLTQLSGTSHQVISAVCVCSEGRQAVRHT CCCCCEECCCCCEEECHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHH VTTVQFRPFEAARLEVYVATGEGRDKAGSYGIQGLGGALVESLSGSYSGVVGLPLEQTVE HHEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEECCHHHHHH LLEWADIPYWQID HHHHCCCCEEECC >Mature Secondary Structure MILYLASGSPRRAELLQQIAVPFTVLPAPSIDETPRSAEAAVDYVRRMAREKALVGQARM CEEEEECCCCHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC PTPGAVLGADTAVVLGDQILGKPADDTEALAMLTQLSGTSHQVISAVCVCSEGRQAVRHT CCCCCEECCCCCEEECHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHH VTTVQFRPFEAARLEVYVATGEGRDKAGSYGIQGLGGALVESLSGSYSGVVGLPLEQTVE HHEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEECCHHHHHH LLEWADIPYWQID HHHHCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA