| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is ilvB-1 [H]
Identifier: 110833342
GI number: 110833342
Start: 523056
End: 524777
Strand: Direct
Name: ilvB-1 [H]
Synonym: ABO_0481
Alternate gene names: 110833342
Gene position: 523056-524777 (Clockwise)
Preceding gene: 110833340
Following gene: 110833343
Centisome position: 16.76
GC content: 57.43
Gene sequence:
>1722_bases GTGGAAATGTTATCCGGCGCGGAAATGGTGGTCCGTGCGCTGCAAGACGAGGGAGTGGAGTACATCTTCGGGTATCCCGG AGGGTCCGTACTGCACATTTATGATGCGCTGTTCCAGCAGGACAAGGTCAACCATATTCTGGTCCGCCATGAGCAGGCGG CCACCCATGCGGCCGACGGCTATGCCCGTGCCACCGGCAAGGCCGGTGTGGTCATGGTGACGTCCGGGCCAGGCGCGACT AATGCGATCACTGGCTTGGCTACGGCCTTTATGGATTCGATTCCTATGGTAGTGCTGTCCGGGCAAGTGCGTTCTGACTG GATTGGTGATGATGCCTTCCAGGAAACGGACATGATTGGTGTGTCCCGTCCGGTGGTGAAGCACAGTTTCATGGTTCGTG ATGCCAAAGACATTCCCGAAATCATGAAGAAGGCCTTCTACATCGCCACCACCGGCCGTCCCGGCCCGGTGCTGGTGGAT ATTCCTAAGGATCAGACGGCACCGAACGTCAAGAATCCCTACGAGTATCCCAAGAAAGTGAAGATGCGCTCTTACTCTCC GGTGAGCCGCGGCCATTCCGGGCAGATCCGTAAGGCGCTGGACGAGTTGATGAAAGCCAAGCGCCCGGTGATTTATGCCG GCGGTGGCGTGGTGCAGGGTGAAGGCAGCGAGTTGCTGACCCAGTTGGCCCACCGGCTTAATTTCCCGGTGACCAATACC CTGATGGGACTGGGGGGCTTTCCCGGTACCGACCGTCAGAACGTGGGTATGCTGGGCATGCACGGCACCTATGAAGCCAA CATGACCATGCATAACTCGGATGTGATTTTGGCTGTGGGTGCCCGTCTGGACGACCGGGTGACTAACAATGTGAAGAAGT TCTGCCCGGGCGCCAAGATCATTCACATCGATATCGACCCGGCGACTATCTCTAAAAACATCATGGCGCACATCCCCATC GTGGGCCCGGTGCAGCAGGTGCTGGAAGAGATGCTGGCGGCGCTGGATGAGCACGGTGGCGAGCCGGACCGCAAGGCGCT TGAGCGCTGGTGGGAAGAGATCGACGGCTGGCGCAAGGTGCATGGCATGCGTTATGAGATCAACGAAGATGGTCCCATGA AGCCCCAGCAGGTGGTGCAGGCGCTATATAAGGCAACCAAAGGTGATGCCTATGTGACTTCCGATGTGGGTCAGCACCAG ATGTTCGCAGCCCAGTACTATCAGTACGACAAGCCTCGCCGCTGGATCAACTCCGGTGGCCTGGGGACTATGGGCTTCGG CTTGCCGGCGGCCATGGGGGTGCAGTTTGCGTTCCCCGAGGCGACGGTGGCCTGTGTGACGGGCGAAGGCTCTATTCAGA TGAATATCCAAGAACTGTCCACCTGCCTGCAGTATGGCTTGCCGGTGAAAATCATCAACATTAATAACCAGGCGCTGGGC ATGGTTCGCCAATGGCAGGACATGCAGTACGGCGGCCGTCACAGCCAGTCATACATGGAGTCCCTGCCGGACTTCGTCAA GCTGGCCGAATCTTATGGCCATGTGGGCATGAAGATCACCAAGATCGAGGATCTGGACGCGGCTATGGACGAAGCCTTTG CCCTGAAAGACCGTTTGGTATTCATGGATATTTATGTTGATTCCACCGAGCACGTATACCCTATGCAGATTGCAGACGGT TCCATGCGTGATATGTGGTTGAGCAAGACGGAGCGGACCTGA
Upstream 100 bases:
>100_bases CGGTGCTTTCCGCAGGCAGCAAGCTAGCAGGCTGTTCAACAGCCACACCGTCCCGCTGCGTGGCAGTGGGTAGTATGCAT TTAAATTTGAGGTAGCAACC
Downstream 100 bases:
>100_bases TGCGTCGAATTATTTCTATTCTGATGGAAAACGAGCCGGGCGCACTGAGCCGGGTAATCGGTCTGTTCTCCCAGCGGGGG TACAACATTGAAACCCTTTC
Product: acetolactate synthase 3 catalytic subunit
Products: NA
Alternate protein names: AHAS; Acetohydroxy-acid synthase large subunit; ALS [H]
Number of amino acids: Translated: 573; Mature: 573
Protein sequence:
>573_residues MEMLSGAEMVVRALQDEGVEYIFGYPGGSVLHIYDALFQQDKVNHILVRHEQAATHAADGYARATGKAGVVMVTSGPGAT NAITGLATAFMDSIPMVVLSGQVRSDWIGDDAFQETDMIGVSRPVVKHSFMVRDAKDIPEIMKKAFYIATTGRPGPVLVD IPKDQTAPNVKNPYEYPKKVKMRSYSPVSRGHSGQIRKALDELMKAKRPVIYAGGGVVQGEGSELLTQLAHRLNFPVTNT LMGLGGFPGTDRQNVGMLGMHGTYEANMTMHNSDVILAVGARLDDRVTNNVKKFCPGAKIIHIDIDPATISKNIMAHIPI VGPVQQVLEEMLAALDEHGGEPDRKALERWWEEIDGWRKVHGMRYEINEDGPMKPQQVVQALYKATKGDAYVTSDVGQHQ MFAAQYYQYDKPRRWINSGGLGTMGFGLPAAMGVQFAFPEATVACVTGEGSIQMNIQELSTCLQYGLPVKIININNQALG MVRQWQDMQYGGRHSQSYMESLPDFVKLAESYGHVGMKITKIEDLDAAMDEAFALKDRLVFMDIYVDSTEHVYPMQIADG SMRDMWLSKTERT
Sequences:
>Translated_573_residues MEMLSGAEMVVRALQDEGVEYIFGYPGGSVLHIYDALFQQDKVNHILVRHEQAATHAADGYARATGKAGVVMVTSGPGAT NAITGLATAFMDSIPMVVLSGQVRSDWIGDDAFQETDMIGVSRPVVKHSFMVRDAKDIPEIMKKAFYIATTGRPGPVLVD IPKDQTAPNVKNPYEYPKKVKMRSYSPVSRGHSGQIRKALDELMKAKRPVIYAGGGVVQGEGSELLTQLAHRLNFPVTNT LMGLGGFPGTDRQNVGMLGMHGTYEANMTMHNSDVILAVGARLDDRVTNNVKKFCPGAKIIHIDIDPATISKNIMAHIPI VGPVQQVLEEMLAALDEHGGEPDRKALERWWEEIDGWRKVHGMRYEINEDGPMKPQQVVQALYKATKGDAYVTSDVGQHQ MFAAQYYQYDKPRRWINSGGLGTMGFGLPAAMGVQFAFPEATVACVTGEGSIQMNIQELSTCLQYGLPVKIININNQALG MVRQWQDMQYGGRHSQSYMESLPDFVKLAESYGHVGMKITKIEDLDAAMDEAFALKDRLVFMDIYVDSTEHVYPMQIADG SMRDMWLSKTERT >Mature_573_residues MEMLSGAEMVVRALQDEGVEYIFGYPGGSVLHIYDALFQQDKVNHILVRHEQAATHAADGYARATGKAGVVMVTSGPGAT NAITGLATAFMDSIPMVVLSGQVRSDWIGDDAFQETDMIGVSRPVVKHSFMVRDAKDIPEIMKKAFYIATTGRPGPVLVD IPKDQTAPNVKNPYEYPKKVKMRSYSPVSRGHSGQIRKALDELMKAKRPVIYAGGGVVQGEGSELLTQLAHRLNFPVTNT LMGLGGFPGTDRQNVGMLGMHGTYEANMTMHNSDVILAVGARLDDRVTNNVKKFCPGAKIIHIDIDPATISKNIMAHIPI VGPVQQVLEEMLAALDEHGGEPDRKALERWWEEIDGWRKVHGMRYEINEDGPMKPQQVVQALYKATKGDAYVTSDVGQHQ MFAAQYYQYDKPRRWINSGGLGTMGFGLPAAMGVQFAFPEATVACVTGEGSIQMNIQELSTCLQYGLPVKIININNQALG MVRQWQDMQYGGRHSQSYMESLPDFVKLAESYGHVGMKITKIEDLDAAMDEAFALKDRLVFMDIYVDSTEHVYPMQIADG SMRDMWLSKTERT
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI93004078, Length=564, Percent_Identity=25.886524822695, Blast_Score=176, Evalue=6e-44, Organism=Homo sapiens, GI21361361, Length=559, Percent_Identity=25.0447227191413, Blast_Score=146, Evalue=4e-35, Organism=Escherichia coli, GI87081685, Length=575, Percent_Identity=63.1304347826087, Blast_Score=782, Evalue=0.0, Organism=Escherichia coli, GI1790104, Length=554, Percent_Identity=39.5306859205776, Blast_Score=404, Evalue=1e-113, Organism=Escherichia coli, GI1786717, Length=547, Percent_Identity=34.3692870201097, Blast_Score=310, Evalue=2e-85, Organism=Escherichia coli, GI1787096, Length=555, Percent_Identity=28.1081081081081, Blast_Score=190, Evalue=2e-49, Organism=Escherichia coli, GI1788716, Length=540, Percent_Identity=25.3703703703704, Blast_Score=158, Evalue=9e-40, Organism=Caenorhabditis elegans, GI17531299, Length=580, Percent_Identity=25.1724137931034, Blast_Score=166, Evalue=4e-41, Organism=Caenorhabditis elegans, GI17531301, Length=580, Percent_Identity=25.1724137931034, Blast_Score=166, Evalue=5e-41, Organism=Caenorhabditis elegans, GI17542570, Length=582, Percent_Identity=24.914089347079, Blast_Score=127, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6323755, Length=586, Percent_Identity=43.0034129692833, Blast_Score=455, Evalue=1e-128, Organism=Saccharomyces cerevisiae, GI6320816, Length=490, Percent_Identity=22.6530612244898, Blast_Score=104, Evalue=3e-23, Organism=Drosophila melanogaster, GI19922626, Length=600, Percent_Identity=25.6666666666667, Blast_Score=189, Evalue=4e-48,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 63287; Mature: 63287
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEMLSGAEMVVRALQDEGVEYIFGYPGGSVLHIYDALFQQDKVNHILVRHEQAATHAADG CCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEECHHHHHHHCCC YARATGKAGVVMVTSGPGATNAITGLATAFMDSIPMVVLSGQVRSDWIGDDAFQETDMIG HHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCHHCCCCCCCHHHHCCCCC VSRPVVKHSFMVRDAKDIPEIMKKAFYIATTGRPGPVLVDIPKDQTAPNVKNPYEYPKKV CCCHHHHHHHHHCCHHHHHHHHHHHEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCHHH KMRSYSPVSRGHSGQIRKALDELMKAKRPVIYAGGGVVQGEGSELLTQLAHRLNFPVTNT CCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCEEEECCCHHHHHHHHHHCCCCHHHH LMGLGGFPGTDRQNVGMLGMHGTYEANMTMHNSDVILAVGARLDDRVTNNVKKFCPGAKI HHHCCCCCCCCCCCCCEEECCCEEECCEEEECCCEEEEECCCCCHHHHHHHHHHCCCCEE IHIDIDPATISKNIMAHIPIVGPVQQVLEEMLAALDEHGGEPDRKALERWWEEIDGWRKV EEEECCHHHHCCCHHEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH HGMRYEINEDGPMKPQQVVQALYKATKGDAYVTSDVGQHQMFAAQYYQYDKPRRWINSGG CCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCHHHHCCCC LGTMGFGLPAAMGVQFAFPEATVACVTGEGSIQMNIQELSTCLQYGLPVKIININNQALG CCCCCCCCHHHHCEEEECCCCEEEEEECCCCEEEEHHHHHHHHHCCCCEEEEECCCHHHH MVRQWQDMQYGGRHSQSYMESLPDFVKLAESYGHVGMKITKIEDLDAAMDEAFALKDRLV HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHCEEE FMDIYVDSTEHVYPMQIADGSMRDMWLSKTERT EEEEEECCCCCEEEEEECCCCHHHHHHHHCCCC >Mature Secondary Structure MEMLSGAEMVVRALQDEGVEYIFGYPGGSVLHIYDALFQQDKVNHILVRHEQAATHAADG CCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEECHHHHHHHCCC YARATGKAGVVMVTSGPGATNAITGLATAFMDSIPMVVLSGQVRSDWIGDDAFQETDMIG HHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCHHCCCCCCCHHHHCCCCC VSRPVVKHSFMVRDAKDIPEIMKKAFYIATTGRPGPVLVDIPKDQTAPNVKNPYEYPKKV CCCHHHHHHHHHCCHHHHHHHHHHHEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCHHH KMRSYSPVSRGHSGQIRKALDELMKAKRPVIYAGGGVVQGEGSELLTQLAHRLNFPVTNT CCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCEEEECCCHHHHHHHHHHCCCCHHHH LMGLGGFPGTDRQNVGMLGMHGTYEANMTMHNSDVILAVGARLDDRVTNNVKKFCPGAKI HHHCCCCCCCCCCCCCEEECCCEEECCEEEECCCEEEEECCCCCHHHHHHHHHHCCCCEE IHIDIDPATISKNIMAHIPIVGPVQQVLEEMLAALDEHGGEPDRKALERWWEEIDGWRKV EEEECCHHHHCCCHHEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH HGMRYEINEDGPMKPQQVVQALYKATKGDAYVTSDVGQHQMFAAQYYQYDKPRRWINSGG CCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCHHHHCCCC LGTMGFGLPAAMGVQFAFPEATVACVTGEGSIQMNIQELSTCLQYGLPVKIININNQALG CCCCCCCCHHHHCEEEECCCCEEEEEECCCCEEEEHHHHHHHHHCCCCEEEEECCCHHHH MVRQWQDMQYGGRHSQSYMESLPDFVKLAESYGHVGMKITKIEDLDAAMDEAFALKDRLV HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHCEEE FMDIYVDSTEHVYPMQIADGSMRDMWLSKTERT EEEEEECCCCCEEEEEECCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]