Click here to switch to the map view.

The map label for this gene is pilN

Identifier: 110833324

GI number: 110833324

Start: 503975

End: 504463

Strand: Direct

Name: pilN

Synonym: ABO_0463

Alternate gene names: NA

Gene position: 503975-504463 (Clockwise)

Preceding gene: 110833323

Following gene: 110833325

Centisome position: 16.15

GC content: 48.88

Gene sequence:

>489_bases
ATGAAAACAGCATCAAAAAGCCACGCCCAGACAGGCTTTACCATCATCGAATTGATGATCGGGATTGCTGTGGCGGGCAT
TCTTTTGGTGGTTGCCGTACCAGCGTTTAATGACTTCCAGAAAAGAAACGCTCTGCGCTCTACGGCGGCTGACTTTATTA
CTGCGATTAATACTGCCCGCATTCAGGCGATCAATTTGAGAGTAACTGTAACGCTTAAGCCGATTTCAGGCTCGGACTGG
GGGGGGGGCTGGGTAATTGATTACCCCGCATCGGTTCTCACAGAGGATGACCAGGAGTTCTTGCCGACAGGCAGCAGTAA
AATTATTTCCGAGACCGGGCTGAGCAAAATTGAATTTCGTAGTAATGGTTTGTCGAACGCGGGTGAGGCTAAATTTTCTT
TATGCGATGACCGTAGTGCAGAGGAAGGAAGAGCAATTACTGTTTCGCCCTTTGGCAAGGTCACCAACGAAGTGAAGAGC
TGTAGCTGA

Upstream 100 bases:

>100_bases
GTTCAGTGGCAGCAAGGGGCCACTGGTCTTCATTCAATTGAAGGCAGATCGGGTCTTGCTATCGTGATAGTCCGAATAAG
ATCAATAGACCGGGGCAGGG

Downstream 100 bases:

>100_bases
TGATGATCACGGGAAAACAACAACGTGGTGTGGGGCTTATCGAGGTGATGATTGCCTTGTTAGTGCTAGCAATTGGAGTG
CTTGGCTATGCGGGAATGCA

Product: pilus biogenesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MKTASKSHAQTGFTIIELMIGIAVAGILLVVAVPAFNDFQKRNALRSTAADFITAINTARIQAINLRVTVTLKPISGSDW
GGGWVIDYPASVLTEDDQEFLPTGSSKIISETGLSKIEFRSNGLSNAGEAKFSLCDDRSAEEGRAITVSPFGKVTNEVKS
CS

Sequences:

>Translated_162_residues
MKTASKSHAQTGFTIIELMIGIAVAGILLVVAVPAFNDFQKRNALRSTAADFITAINTARIQAINLRVTVTLKPISGSDW
GGGWVIDYPASVLTEDDQEFLPTGSSKIISETGLSKIEFRSNGLSNAGEAKFSLCDDRSAEEGRAITVSPFGKVTNEVKS
CS
>Mature_162_residues
MKTASKSHAQTGFTIIELMIGIAVAGILLVVAVPAFNDFQKRNALRSTAADFITAINTARIQAINLRVTVTLKPISGSDW
GGGWVIDYPASVLTEDDQEFLPTGSSKIISETGLSKIEFRSNGLSNAGEAKFSLCDDRSAEEGRAITVSPFGKVTNEVKS
CS

Specific function: Unknown

COG id: COG4970

COG function: function code NU; Tfp pilus assembly protein FimT

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17241; Mature: 17241

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTASKSHAQTGFTIIELMIGIAVAGILLVVAVPAFNDFQKRNALRSTAADFITAINTAR
CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCE
IQAINLRVTVTLKPISGSDWGGGWVIDYPASVLTEDDQEFLPTGSSKIISETGLSKIEFR
EEEEEEEEEEEEEECCCCCCCCCEEEECCHHHHCCCCHHHCCCCCCHHHHHCCCCEEEEC
SNGLSNAGEAKFSLCDDRSAEEGRAITVSPFGKVTNEVKSCS
CCCCCCCCCCEEEECCCCCCCCCCEEEECCCHHHHHHHHCCC
>Mature Secondary Structure
MKTASKSHAQTGFTIIELMIGIAVAGILLVVAVPAFNDFQKRNALRSTAADFITAINTAR
CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCE
IQAINLRVTVTLKPISGSDWGGGWVIDYPASVLTEDDQEFLPTGSSKIISETGLSKIEFR
EEEEEEEEEEEEEECCCCCCCCCEEEECCHHHHCCCCHHHCCCCCCHHHHHCCCCEEEEC
SNGLSNAGEAKFSLCDDRSAEEGRAITVSPFGKVTNEVKSCS
CCCCCCCCCCEEEECCCCCCCCCCEEEECCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA