Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

Click here to switch to the map view.

The map label for this gene is 110833299

Identifier: 110833299

GI number: 110833299

Start: 478942

End: 479625

Strand: Direct

Name: 110833299

Synonym: ABO_0438

Alternate gene names: NA

Gene position: 478942-479625 (Clockwise)

Preceding gene: 110833298

Following gene: 110833300

Centisome position: 15.35

GC content: 55.7

Gene sequence:

>684_bases
ATGACCGCCTATGATATTTCCTTGGCTGACGCCATGATCCAGCGCCGCTCAGTTCGCGGTTTTACTGATAAGCCAGTGCC
CAAGGCGGTGATGGATGAGGTGTTCTCTCTTGCGCAGCACTCGCCATCCAACTGCAATATTCAGCCCTGGAAAGTGTGGG
TTGCCTCCGGAGCCGTACGTGATGCGCTGCGCGAGCGGATGATCGAGAAGGTCACCAATGGTGTGCCCTTTGCTCCAGAT
TATGATGGCCCGCCTAGGTTTGAAGGGGTATACCGGGAGCGCCAAGTCGATTGTGCCATGGCGTTATATGGCAGCATGGG
TATTGCCCGTGAAGATCGTCCTGGCCGGCAGCGAGCAGAGCTGCGTAACTTCGAACTGTTTGATGCTCCCCATGTGGCTT
TTATTGGCATGGAGCGCAACTTTGGCGTCACCGTAGGGTTGGATGTGGGAATGTATGTGCAGTCGTTGTTGCTGTCCATG
AGTGCCTATGGACTGGGAGCGTGTGCCCAAGGCAGCATGCGTTACTATCCGGATGATGTACGGGACATGCTAGGGATTCC
TTCTTCCACGGCTATCGTGTTGGGCATCAGTTTTGGTTACGAAGATCCGGAAGTGGCCGCCAACAAGGCTCGGGTTGGTC
GCGTGCCGCTTTCCGACTCGGTGCAGTTTTGCGATAGCGTGTGA

Upstream 100 bases:

>100_bases
CACGGGTGGTGCGTGTCGCATAAATAGCCTGGTCGTTAAGGTCATCGTTTCTGCCCTCTTGCCCGGTTAGACTCGAGGCG
AGTTTTGACAGGAGCCATTC

Downstream 100 bases:

>100_bases
TCTGAGGGCTTGTTCCACTGACTGTGTAACAAGGGCTCTCAGGCAGCGGTGGCGCAATTGTGTTAGGATAGGGGTTCTCA
CCAGCGTAGCGAACCCTCCT

Product: oxidoreductase

Products: NA

Alternate protein names: Nitroreductase Family Protein; Oxidoreductase; P-Nitrobenzoate Reductase; NfnB Protein; NADH Dehydrogenase; Nitrobenzoate Nitroreductase; Oxidoreductase Protein; Nitrobenzene Nitroreductase; Nitroreductase Family; Nitrobenzoate Reductase

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MTAYDISLADAMIQRRSVRGFTDKPVPKAVMDEVFSLAQHSPSNCNIQPWKVWVASGAVRDALRERMIEKVTNGVPFAPD
YDGPPRFEGVYRERQVDCAMALYGSMGIAREDRPGRQRAELRNFELFDAPHVAFIGMERNFGVTVGLDVGMYVQSLLLSM
SAYGLGACAQGSMRYYPDDVRDMLGIPSSTAIVLGISFGYEDPEVAANKARVGRVPLSDSVQFCDSV

Sequences:

>Translated_227_residues
MTAYDISLADAMIQRRSVRGFTDKPVPKAVMDEVFSLAQHSPSNCNIQPWKVWVASGAVRDALRERMIEKVTNGVPFAPD
YDGPPRFEGVYRERQVDCAMALYGSMGIAREDRPGRQRAELRNFELFDAPHVAFIGMERNFGVTVGLDVGMYVQSLLLSM
SAYGLGACAQGSMRYYPDDVRDMLGIPSSTAIVLGISFGYEDPEVAANKARVGRVPLSDSVQFCDSV
>Mature_226_residues
TAYDISLADAMIQRRSVRGFTDKPVPKAVMDEVFSLAQHSPSNCNIQPWKVWVASGAVRDALRERMIEKVTNGVPFAPDY
DGPPRFEGVYRERQVDCAMALYGSMGIAREDRPGRQRAELRNFELFDAPHVAFIGMERNFGVTVGLDVGMYVQSLLLSMS
AYGLGACAQGSMRYYPDDVRDMLGIPSSTAIVLGISFGYEDPEVAANKARVGRVPLSDSVQFCDSV

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25032; Mature: 24901

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAYDISLADAMIQRRSVRGFTDKPVPKAVMDEVFSLAQHSPSNCNIQPWKVWVASGAVR
CCEECHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHH
DALRERMIEKVTNGVPFAPDYDGPPRFEGVYRERQVDCAMALYGSMGIAREDRPGRQRAE
HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
LRNFELFDAPHVAFIGMERNFGVTVGLDVGMYVQSLLLSMSAYGLGACAQGSMRYYPDDV
HCCCEEECCCCEEEEEECCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH
RDMLGIPSSTAIVLGISFGYEDPEVAANKARVGRVPLSDSVQFCDSV
HHHHCCCCCCEEEEEEECCCCCHHHHHCCHHCCCCCCCCCHHHHCCC
>Mature Secondary Structure 
TAYDISLADAMIQRRSVRGFTDKPVPKAVMDEVFSLAQHSPSNCNIQPWKVWVASGAVR
CEECHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHH
DALRERMIEKVTNGVPFAPDYDGPPRFEGVYRERQVDCAMALYGSMGIAREDRPGRQRAE
HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
LRNFELFDAPHVAFIGMERNFGVTVGLDVGMYVQSLLLSMSAYGLGACAQGSMRYYPDDV
HCCCEEECCCCEEEEEECCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH
RDMLGIPSSTAIVLGISFGYEDPEVAANKARVGRVPLSDSVQFCDSV
HHHHCCCCCCEEEEEEECCCCCHHHHHCCHHCCCCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA