Definition Shigella flexneri 5 str. 8401 chromosome, complete genome.
Accession NC_008258
Length 4,574,284

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The map label for this gene is ygcY

Identifier: 110806546

GI number:

Start: 2740174

End: 2741514

Strand: Direct

Name: ygcY

Synonym: SFV_2669

Alternate gene names: NA

Gene position: NA

Preceding gene: 110806545

Following gene: 110806547

Centisome position: NA

GC content: NA

Gene sequence:

>1341_bases
ATGGCGACACAATCCAGTCCTGTTATTACTGATATGAAAGTCATTCCGGTCGCCGGACATGACAGCATGTTGCTCAATAT
TGGTGGTGCGCATAACGCATACTTCACCCGCAATATCGTGGTACTCACCGATAACGCCGGGCATACCGGCATTGGTGAAG
CGCCGGGCGGAGAGGTGATTTATCAAACACTGGTCGATGCTATTCCGATGGTTCTGGGCCAGGAAGTTGCGCGCCTGAAT
AAAGTGGTTCAGCAGGTACATAAAGGTAATCAGGCAGCCGATTTTGATACCTTCGGCAAAGGTGCCTGGACTTTTGAATT
GCGCGTTAATGCCGTGGCGGCGCTGGAAGCCGCCTTGCTTGACCTGCTAGGTAAGGCGCTGAATGTTCCGGTCTGCGAAC
TGTTGGGGCCAGGCAAGCAACGCGAGACTATTACCGTCCTCGGTTATCTGTTTTATATAGGTGATCGGACCAAAACCGAT
CTTCCTTATCTGGAAAATACGCCGGGCAACCATGAGTGGTATCAGTTGCGCCATCAGAAAGCGATGAACAGCGAAGCCGT
TGTGCGTCTGGCGGAAGCCTCACAGGATCGCTATGGCTTTAAAGATTTCAAACTTAAGGGCGGGGTGTTACCTGGCGAGC
AAGAAATCGACACTGTTCGTGCATTGAAGAAAAGCTTCCCGGATGCGCGGATTACCGTTGATCCCAACGGTGCATGGCTG
CTTGATGAAGCCATTTCTTTATGCAAAGGGCTGAATGATGTTCTTACCTATGCCGAAGATCCATGCGGCGCAGAACAGGG
CTTCTCCGGACGTGAAGTGATGGCGGAGTTTCGACGGGCGACCGGCTTGCCCGTCGCGACTAACATGATCGCCACCAACT
GGCGCGAAATGGGTCATGCGGTGATGCTCAATGCGGTAGATATTCCACTTGCCGATCCGCACTTCTGGACGCTTTCCGGT
GCAGTCCGCGTGGCGCAGCTTTGCGACGACTGGGGGCTGACCTGGGGCTGCCATTCCAACAACCATTTCGATATCTCTCT
GGCGATATTTACCCATGTGGGCGCGGCGGCACCGGGTAATCCTACCGCTATCGATACCCACTGGATTTGGCAGGAGGGCG
ATTGTCGCCTGACCAAAAATCCGCTGGAGATTAAAAACGGAAAAATTGCCGTTCCTGATGCGCCCGGTCTGGGCGTGGAA
CTGGACTGGGAACAGGTACAAAAGGCACATGAGGCCTATAAACGTCTGCCTTGCGGTGCGCGTAACGACGCAGGTCCGAT
GCAGTACCTGATCCCCGGCTGGACCTTTGACCGTAAACGTCCCGTTTTCGGCCGTCATTGA

Upstream 100 bases:

>100_bases
ATTTATGTTGGTGTTCATGCCCTAATCGCGGTACTGAGCTACCTGGTGCTGGTGGGCGATATCAAGCGTATCGAGCTGAA
ACCTGTCGCGGGGCAATAAG

Downstream 100 bases:

>100_bases
TTCTGAAAAAGGACATAAATATGAGTTCTCAATTTACGACGCCTGTTGTTACTGAAATGCAGGTCATCCCGGTGGCGGGT
CATGACAGTATGCTGATGAA

Product: putative glucarate dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>446_residues
MATQSSPVITDMKVIPVAGHDSMLLNIGGAHNAYFTRNIVVLTDNAGHTGIGEAPGGEVIYQTLVDAIPMVLGQEVARLN
KVVQQVHKGNQAADFDTFGKGAWTFELRVNAVAALEAALLDLLGKALNVPVCELLGPGKQRETITVLGYLFYIGDRTKTD
LPYLENTPGNHEWYQLRHQKAMNSEAVVRLAEASQDRYGFKDFKLKGGVLPGEQEIDTVRALKKSFPDARITVDPNGAWL
LDEAISLCKGLNDVLTYAEDPCGAEQGFSGREVMAEFRRATGLPVATNMIATNWREMGHAVMLNAVDIPLADPHFWTLSG
AVRVAQLCDDWGLTWGCHSNNHFDISLAIFTHVGAAAPGNPTAIDTHWIWQEGDCRLTKNPLEIKNGKIAVPDAPGLGVE
LDWEQVQKAHEAYKRLPCGARNDAGPMQYLIPGWTFDRKRPVFGRH

Sequences:
NA

Specific function: NA

COG id: COG4948

COG function: function code MR; L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA