| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is gsiB [H]
Identifier: 110635961
GI number: 110635961
Start: 3926260
End: 3927807
Strand: Reverse
Name: gsiB [H]
Synonym: Meso_3635
Alternate gene names: 110635961
Gene position: 3927807-3926260 (Counterclockwise)
Preceding gene: 110635962
Following gene: 110635960
Centisome position: 89.02
GC content: 62.47
Gene sequence:
>1548_bases ATGACAGAATTATATAAAATGAGAGGGCGCCGGGACATTTCACGTCGAGCCGTCCTGGCAGGCTCCGGCGGCCTCATTGG AGCTCTACTCGCAACCCGGTTCGCAGCCGCGCAAAGCGAGCCGAAGCGCGGCGGAACGCTGCGCGTCGCCTTCTCCTCCA CCCCCGACAGCCTCGACCCGCAGCGGACCCTCGCGGCGGCCGGGCAGCAAATCTCGAGCCTCGTCTTCGATAACCTGACC CGCCTCGACGAAAACGGGATCGCCCAGCCCATGCTGGCCACGGCCTGGACCCCAGAGGCAGGAGGGGTTGAATGGGTGTT CGAGCTGCGCCAGGGCGTCAAGTTCCATCACGGCACCGAGTTCACGTCGGCGGACGTAGTAGCGACCATCGAGCGCGCCT ATGCGCCGGACTCCACCTTCCGCTCAAAGGGGGCCTTTGGGCCGATCAAGGAGGTAAAGGCTGAGGGCCCGTACAAGGTC CGTTTCGTTCTCACGCAAGCCTTCGGCGAAATTCCGGTGGTGGTGGCCGGGCGCTGGTCGCGCATTATCGCCGCGGATGC GATCGATACGCTGGAGACCGCGCCCTCGGGCACCGGGCCGTTCCTCTTCAAGTCGTTCGAAGCGGGCGCCAGTGTGAACG TCGTGCGGAACCCCAGCTACTGGATCGAAGGCCAACCCTACCTCGACGGTGTGGAACTCGTCGGCATCAAGGAATCGATC GCGCAGCAAGCGGCGATCCGCGGCGGCAACGTCGACGTTCTTACGCAGATCCCGGTCGAGACATTCCTGTCGCTGCGCAA TGCCGATGGCATCAAGGTTTTCTCGAAGGTCACCGGCGCCTACCAAGTGATCATGATGCAGTCCAACATGGCGCCTTTCG ATAACCCGAAGGTGCGCGAGGCGTTCCGCTACGTGCTGGACCGCGACCTGCTGGTGGCCTCGGCGCTGCTCGGTCAGGGT CTCGTCGGCAACGACATGCCATTCCCGCCCGGCAGCGAATACCTGCCCGAAGTACCGCAATACAAGCAGGATCTCGATAA GGCCAAAGCGCTTCTCAAGGAGGCCGGCCACGAGACAATGGACATCGAGCTCTTCACCAGCTCGGAACGTCCACCCACCC CGAAGATCGCGCTCGCCTTCAAGGAGGCAGCGGCCAAGATCGGCGTCAACGTCACCATCACCGACGTTCCCTATGCCGAA TACGCGGCCAACGTGGCGCGCAAGAAACCCTTCTACACGACGCAGTGGAGCGCCTATCCGACGATCTACGAGCGGCTGTA CAACATGTACCGCAGCGGGGCGAACTTTAAGTACGGCGCCGTCGAGGACGCCGACGGTCTGGACGCGCTGCTCGACCAGA TCATTTCCGAACTCGACGACGACAAGCGCAAGGAGCTTATCAAGGAAGCGCTGATCAAGATCCACAAGCATGGTGAGCGG ATCATCCCCTACTTCACCATGTATGTCGGAGCCGCCAGCGAGCGGGTGCAGGCTTACACGCCGCCGACCTACGACATCAT CGACTTCCGCGAAGTCTGGCTGTCGTAA
Upstream 100 bases:
>100_bases GGTGGTCAAGGTCTGATTTGCACTGCCGGGAGTACGCTCCCCAATCACCTGAAGAAGCCGGTAAAAACCGGTCGCGGCAT CCAAATCCAGAGGTGTGACG
Downstream 100 bases:
>100_bases CTCGATGCCATCCTGTTCCGGGCCGATGTCATGACGGAGATGATCATCCGCAGGGTCGGGCTCCTCGCCCTCATCCTGTT TGCCGTGTCGTTCATGACGT
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 515; Mature: 514
Protein sequence:
>515_residues MTELYKMRGRRDISRRAVLAGSGGLIGALLATRFAAAQSEPKRGGTLRVAFSSTPDSLDPQRTLAAAGQQISSLVFDNLT RLDENGIAQPMLATAWTPEAGGVEWVFELRQGVKFHHGTEFTSADVVATIERAYAPDSTFRSKGAFGPIKEVKAEGPYKV RFVLTQAFGEIPVVVAGRWSRIIAADAIDTLETAPSGTGPFLFKSFEAGASVNVVRNPSYWIEGQPYLDGVELVGIKESI AQQAAIRGGNVDVLTQIPVETFLSLRNADGIKVFSKVTGAYQVIMMQSNMAPFDNPKVREAFRYVLDRDLLVASALLGQG LVGNDMPFPPGSEYLPEVPQYKQDLDKAKALLKEAGHETMDIELFTSSERPPTPKIALAFKEAAAKIGVNVTITDVPYAE YAANVARKKPFYTTQWSAYPTIYERLYNMYRSGANFKYGAVEDADGLDALLDQIISELDDDKRKELIKEALIKIHKHGER IIPYFTMYVGAASERVQAYTPPTYDIIDFREVWLS
Sequences:
>Translated_515_residues MTELYKMRGRRDISRRAVLAGSGGLIGALLATRFAAAQSEPKRGGTLRVAFSSTPDSLDPQRTLAAAGQQISSLVFDNLT RLDENGIAQPMLATAWTPEAGGVEWVFELRQGVKFHHGTEFTSADVVATIERAYAPDSTFRSKGAFGPIKEVKAEGPYKV RFVLTQAFGEIPVVVAGRWSRIIAADAIDTLETAPSGTGPFLFKSFEAGASVNVVRNPSYWIEGQPYLDGVELVGIKESI AQQAAIRGGNVDVLTQIPVETFLSLRNADGIKVFSKVTGAYQVIMMQSNMAPFDNPKVREAFRYVLDRDLLVASALLGQG LVGNDMPFPPGSEYLPEVPQYKQDLDKAKALLKEAGHETMDIELFTSSERPPTPKIALAFKEAAAKIGVNVTITDVPYAE YAANVARKKPFYTTQWSAYPTIYERLYNMYRSGANFKYGAVEDADGLDALLDQIISELDDDKRKELIKEALIKIHKHGER IIPYFTMYVGAASERVQAYTPPTYDIIDFREVWLS >Mature_514_residues TELYKMRGRRDISRRAVLAGSGGLIGALLATRFAAAQSEPKRGGTLRVAFSSTPDSLDPQRTLAAAGQQISSLVFDNLTR LDENGIAQPMLATAWTPEAGGVEWVFELRQGVKFHHGTEFTSADVVATIERAYAPDSTFRSKGAFGPIKEVKAEGPYKVR FVLTQAFGEIPVVVAGRWSRIIAADAIDTLETAPSGTGPFLFKSFEAGASVNVVRNPSYWIEGQPYLDGVELVGIKESIA QQAAIRGGNVDVLTQIPVETFLSLRNADGIKVFSKVTGAYQVIMMQSNMAPFDNPKVREAFRYVLDRDLLVASALLGQGL VGNDMPFPPGSEYLPEVPQYKQDLDKAKALLKEAGHETMDIELFTSSERPPTPKIALAFKEAAAKIGVNVTITDVPYAEY AANVARKKPFYTTQWSAYPTIYERLYNMYRSGANFKYGAVEDADGLDALLDQIISELDDDKRKELIKEALIKIHKHGERI IPYFTMYVGAASERVQAYTPPTYDIIDFREVWLS
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 5 family [H]
Homologues:
Organism=Escherichia coli, GI1787052, Length=420, Percent_Identity=26.9047619047619, Blast_Score=135, Evalue=8e-33, Organism=Escherichia coli, GI1787762, Length=408, Percent_Identity=25.7352941176471, Blast_Score=105, Evalue=8e-24, Organism=Escherichia coli, GI1789966, Length=531, Percent_Identity=24.6704331450094, Blast_Score=99, Evalue=7e-22, Organism=Escherichia coli, GI1789887, Length=462, Percent_Identity=25.1082251082251, Blast_Score=93, Evalue=4e-20, Organism=Escherichia coli, GI1786256, Length=306, Percent_Identity=22.8758169934641, Blast_Score=65, Evalue=8e-12, Organism=Escherichia coli, GI1787551, Length=383, Percent_Identity=21.1488250652742, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000914 [H]
Pfam domain/function: PF00496 SBP_bac_5 [H]
EC number: NA
Molecular weight: Translated: 56689; Mature: 56558
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTELYKMRGRRDISRRAVLAGSGGLIGALLATRFAAAQSEPKRGGTLRVAFSSTPDSLDP CCHHHHHHCCCCHHHCEEEECCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCH QRTLAAAGQQISSLVFDNLTRLDENGIAQPMLATAWTPEAGGVEWVFELRQGVKFHHGTE HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCHHHHHHHHHCCEECCCCC FTSADVVATIERAYAPDSTFRSKGAFGPIKEVKAEGPYKVRFVLTQAFGEIPVVVAGRWS CCCCHHHHHHHHHCCCCCHHHCCCCCCCHHHHCCCCCEEEEEEEEHHHCCCCEEEECCCH RIIAADAIDTLETAPSGTGPFLFKSFEAGASVNVVRNPSYWIEGQPYLDGVELVGIKESI HHHHHHHHHHHHCCCCCCCCHHEEHHCCCCEEEEEECCCEEECCCCCCCCEEEECHHHHH AQQAAIRGGNVDVLTQIPVETFLSLRNADGIKVFSKVTGAYQVIMMQSNMAPFDNPKVRE HHHHHHCCCCEEEEEECCHHHHHHHCCCCCHHHHHHHCCCEEEEEEECCCCCCCCHHHHH AFRYVLDRDLLVASALLGQGLVGNDMPFPPGSEYLPEVPQYKQDLDKAKALLKEAGHETM HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEE DIELFTSSERPPTPKIALAFKEAAAKIGVNVTITDVPYAEYAANVARKKPFYTTQWSAYP EEEEEECCCCCCCCCEEHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCEECCCCCCH TIYERLYNMYRSGANFKYGAVEDADGLDALLDQIISELDDDKRKELIKEALIKIHKHGER HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCE IIPYFTMYVGAASERVQAYTPPTYDIIDFREVWLS EHHHHHHHHCCHHHCCEECCCCCCCHHHHHHHHCC >Mature Secondary Structure TELYKMRGRRDISRRAVLAGSGGLIGALLATRFAAAQSEPKRGGTLRVAFSSTPDSLDP CHHHHHHCCCCHHHCEEEECCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCH QRTLAAAGQQISSLVFDNLTRLDENGIAQPMLATAWTPEAGGVEWVFELRQGVKFHHGTE HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCHHHHHHHHHCCEECCCCC FTSADVVATIERAYAPDSTFRSKGAFGPIKEVKAEGPYKVRFVLTQAFGEIPVVVAGRWS CCCCHHHHHHHHHCCCCCHHHCCCCCCCHHHHCCCCCEEEEEEEEHHHCCCCEEEECCCH RIIAADAIDTLETAPSGTGPFLFKSFEAGASVNVVRNPSYWIEGQPYLDGVELVGIKESI HHHHHHHHHHHHCCCCCCCCHHEEHHCCCCEEEEEECCCEEECCCCCCCCEEEECHHHHH AQQAAIRGGNVDVLTQIPVETFLSLRNADGIKVFSKVTGAYQVIMMQSNMAPFDNPKVRE HHHHHHCCCCEEEEEECCHHHHHHHCCCCCHHHHHHHCCCEEEEEEECCCCCCCCHHHHH AFRYVLDRDLLVASALLGQGLVGNDMPFPPGSEYLPEVPQYKQDLDKAKALLKEAGHETM HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEE DIELFTSSERPPTPKIALAFKEAAAKIGVNVTITDVPYAEYAANVARKKPFYTTQWSAYP EEEEEECCCCCCCCCEEHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCEECCCCCCH TIYERLYNMYRSGANFKYGAVEDADGLDALLDQIISELDDDKRKELIKEALIKIHKHGER HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCE IIPYFTMYVGAASERVQAYTPPTYDIIDFREVWLS EHHHHHHHHCCHHHCCEECCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA