| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110635817
Identifier: 110635817
GI number: 110635817
Start: 3763142
End: 3764110
Strand: Reverse
Name: 110635817
Synonym: Meso_3489
Alternate gene names: NA
Gene position: 3764110-3763142 (Counterclockwise)
Preceding gene: 110635818
Following gene: 110635812
Centisome position: 85.31
GC content: 54.49
Gene sequence:
>969_bases ATGGCTTTTCGGCGTGGCATCGTTTGCGTCTTAATTCTGACTCTTGTGACTCCAGCGGCCGTGGCCGCCACAACAGTACC CAGCGGCAACCGCAATGCTGAGCAACCGCCTATACCCGGCGCTTCTGCCCGGCGCACCGGCGCAGCCAAAACCACTTTCG AAGCCAAGTACCAACGGGTTCACAGGCTTCTCAAAAATGATCGAAGCCTTCGCGCCAAGATACGCGAATCCGCAACGCAA TATAAAATAGACCCCATCCACATTATCGGTGCGATTGTTGGCGAGCACACCTACAATGTCGATGCTTACGACCAACTCCA GACCTATTACGTCAAGGCGGTTTCCTATCTTCGCAGCAGCTTCACCTTTTCCTTCGAAGGTGAGCCGCTGGACGACTTTA TTCAACGCCCGCAATTTGCGCCCTGTGCGAAATTCACCGAGAGCTACAGCCTGTGGAGCTGCCGCGAAACCATTTGGGAC AACAGCTTCCGTGGCAAGACCGTTGAAGGTAAGTCCTTTCCGAAGGACCGCTTCAGCGCCGTTTTTCTGCAGCCGTTTTT TGCCGGACAGACATTCGGCATCGGCCAGCTAAATCCTCTTACCGCACTGCAATTGACAGATATGGTTCACCGGATATCCG GTCACGAGAGAATCGACCACCGCGACCCGCAGCAGGTCTACCGGGCAATTATGGATCCCGACGTTTCGCTCGACTATGTA GCGGCGATGATCAGGAAATCGATCGATGCTTATTCTGAGATTGCCGACTTCGACATCAGCAAAAATCCCGGTCTGACTGC CACACTGTATAATCTGGGAAATCCTGAGACCCGCGCGAAGAAGCTGGCTGCCCAAAATCGTCTTCGCAGCCAGCAGGGCT TAGAGCCGAAGCTGCCGGAAGAGAATTACTATGGCTGGCTCGTTAACGACAAGCTGGAGGAGTTGGAGGCGCTCGCCGGC GAATCCTAA
Upstream 100 bases:
>100_bases ACGGCCAAGGCGGGCGCTTTCGGGCGAATTTTAATTCGCTCGACTCAAGCCCCCGCTTTCCGTAGGTTCCCGCAAAAACT CATTACAACCGAGTGGGCGG
Downstream 100 bases:
>100_bases GTGCCTGAACGAGTCCGGGCGCCTATTCAGACCGCTTATGCTTCCGTCCCAAAACATCGTGCAGCGTGCGATGAAGCTGT TCAAGCTCTTGCTCATTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MAFRRGIVCVLILTLVTPAAVAATTVPSGNRNAEQPPIPGASARRTGAAKTTFEAKYQRVHRLLKNDRSLRAKIRESATQ YKIDPIHIIGAIVGEHTYNVDAYDQLQTYYVKAVSYLRSSFTFSFEGEPLDDFIQRPQFAPCAKFTESYSLWSCRETIWD NSFRGKTVEGKSFPKDRFSAVFLQPFFAGQTFGIGQLNPLTALQLTDMVHRISGHERIDHRDPQQVYRAIMDPDVSLDYV AAMIRKSIDAYSEIADFDISKNPGLTATLYNLGNPETRAKKLAAQNRLRSQQGLEPKLPEENYYGWLVNDKLEELEALAG ES
Sequences:
>Translated_322_residues MAFRRGIVCVLILTLVTPAAVAATTVPSGNRNAEQPPIPGASARRTGAAKTTFEAKYQRVHRLLKNDRSLRAKIRESATQ YKIDPIHIIGAIVGEHTYNVDAYDQLQTYYVKAVSYLRSSFTFSFEGEPLDDFIQRPQFAPCAKFTESYSLWSCRETIWD NSFRGKTVEGKSFPKDRFSAVFLQPFFAGQTFGIGQLNPLTALQLTDMVHRISGHERIDHRDPQQVYRAIMDPDVSLDYV AAMIRKSIDAYSEIADFDISKNPGLTATLYNLGNPETRAKKLAAQNRLRSQQGLEPKLPEENYYGWLVNDKLEELEALAG ES >Mature_321_residues AFRRGIVCVLILTLVTPAAVAATTVPSGNRNAEQPPIPGASARRTGAAKTTFEAKYQRVHRLLKNDRSLRAKIRESATQY KIDPIHIIGAIVGEHTYNVDAYDQLQTYYVKAVSYLRSSFTFSFEGEPLDDFIQRPQFAPCAKFTESYSLWSCRETIWDN SFRGKTVEGKSFPKDRFSAVFLQPFFAGQTFGIGQLNPLTALQLTDMVHRISGHERIDHRDPQQVYRAIMDPDVSLDYVA AMIRKSIDAYSEIADFDISKNPGLTATLYNLGNPETRAKKLAAQNRLRSQQGLEPKLPEENYYGWLVNDKLEELEALAGE S
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36251; Mature: 36120
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFRRGIVCVLILTLVTPAAVAATTVPSGNRNAEQPPIPGASARRTGAAKTTFEAKYQRV CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH HRLLKNDRSLRAKIRESATQYKIDPIHIIGAIVGEHTYNVDAYDQLQTYYVKAVSYLRSS HHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH FTFSFEGEPLDDFIQRPQFAPCAKFTESYSLWSCRETIWDNSFRGKTVEGKSFPKDRFSA CEEEECCCCHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH VFLQPFFAGQTFGIGQLNPLTALQLTDMVHRISGHERIDHRDPQQVYRAIMDPDVSLDYV HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCHHHH AAMIRKSIDAYSEIADFDISKNPGLTATLYNLGNPETRAKKLAAQNRLRSQQGLEPKLPE HHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCC ENYYGWLVNDKLEELEALAGES CCCEEEEECCHHHHHHHHHCCC >Mature Secondary Structure AFRRGIVCVLILTLVTPAAVAATTVPSGNRNAEQPPIPGASARRTGAAKTTFEAKYQRV CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH HRLLKNDRSLRAKIRESATQYKIDPIHIIGAIVGEHTYNVDAYDQLQTYYVKAVSYLRSS HHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH FTFSFEGEPLDDFIQRPQFAPCAKFTESYSLWSCRETIWDNSFRGKTVEGKSFPKDRFSA CEEEECCCCHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH VFLQPFFAGQTFGIGQLNPLTALQLTDMVHRISGHERIDHRDPQQVYRAIMDPDVSLDYV HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCHHHH AAMIRKSIDAYSEIADFDISKNPGLTATLYNLGNPETRAKKLAAQNRLRSQQGLEPKLPE HHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCC ENYYGWLVNDKLEELEALAGES CCCEEEEECCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA